Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.7717/peerj.10469
https://doi.org/10.7717/peerj.10469
Cited by: 5
Author(s): Daniel Dimitrov, Quan Gu
Published: over 3 years ago
Software Mentions 12
bioconductor: compcodeR
RNAseq data simulation, differential expression analysis and performance comparison of differential expression methodsPapers that mentioned: 11
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in RPapers that mentioned: 6,568
bioconductor: Harman
The removal of batch effects from datasets using a PCA and constrained optimisation based techniquePapers that mentioned: 10
bioconductor: monocle
Clustering, differential expression, and trajectory analysis for single- cell RNA-SeqPapers that mentioned: 60
bioconductor: singleCellTK
Comprehensive and Interactive Analysis of Single Cell RNA-Seq DataPapers that mentioned: 2
bioconductor: viper
Virtual Inference of Protein-activity by Enriched Regulon analysisPapers that mentioned: 9
pypi: monocle
An async programming framework with a blocking look-alike syntaxPapers that mentioned: 60