Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/cancers12030692

https://doi.org/10.3390/cancers12030692

Hypoxia-Induced Adaptations of miRNomes and Proteomes in Melanoma Cells and Their Secreted Extracellular Vesicles

Cited by: 29
Author(s): Geoffroy Walbrecq, Odile Lecha, Anthoula Gaigneaux, Miriam Rebecca Fougeras, Demetra Philippidou, Christiane Margue, Miléne Tetsi Nomigni, François Bernardin, Gunnar Dittmar, Iris Behrmann, Stephanie Kreis
Published: almost 5 years ago

Software Mentions 11

bioconductor: clusterProfiler
A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223
bioconductor: DEP
Differential Enrichment analysis of Proteomics data
Papers that mentioned: 35
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: miRNAtap
miRNAtap: microRNA Targets - Aggregated Predictions
Papers that mentioned: 12
bioconductor: SpidermiR
SpidermiR: An R/Bioconductor package for integrative network analysis with miRNA data
Papers that mentioned: 13
bioconductor: TCGAbiolinks
TCGAbiolinks: An R/Bioconductor package for integrative analysis with GDC data
Papers that mentioned: 276
cran: Andromeda
Asynchronous Disk-Based Representation of Massive Data
Papers that mentioned: 1,724
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: survival
Survival Analysis
Papers that mentioned: 1,690
cran: tidyverse
Easily Install and Load the 'Tidyverse'
Papers that mentioned: 1,023
pypi: survival
Add static script_dir() method to Path
Papers that mentioned: 1,690