Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: bioconductor: miRNAtap
https://packages.ecosyste.ms/registries/bioconductor.org/packages/miRNAtap
miRNAtap: microRNA Targets - Aggregated Predictions
1 version
Latest release: about 1 year ago
1 dependent package
20,727 downloads total
Papers Mentioning miRNAtap 12
10.3390/ijms22073681
Circulating miRNAs as Biomarkers for Mitochondrial Neuro-Gastrointestinal EncephalomyopathyCited by: 4
Author(s): Mark Mencias, Michelle Levene, Kevin Blighe, Bridget E. Bax
Software Mentions: 14
Published: over 3 years ago
10.1186/s12864-021-07542-0
Variation of microRNA expression in the human placenta driven by population identity and sex of the newbornCited by: 8
Author(s): Songlin Guo, Shouxiong Huang, Xi Jiang, Haiyang Hu, Dingding Han, Carlos S. Moreno, Genevieve Fairbrother, David A. Hughes, Mark Stoneking, Philipp Khaitovich
Software Mentions: 13
Published: over 3 years ago
10.3390/cancers12030692
Hypoxia-Induced Adaptations of miRNomes and Proteomes in Melanoma Cells and Their Secreted Extracellular VesiclesCited by: 29
Author(s): Geoffroy Walbrecq, Odile Lecha, Anthoula Gaigneaux, Miriam Rebecca Fougeras, Demetra Philippidou, Christiane Margue, Miléne Tetsi Nomigni, François Bernardin, Gunnar Dittmar, Iris Behrmann, Stephanie Kreis
Software Mentions: 11
Published: almost 5 years ago
10.3389/fgene.2020.00192
Integrated Analysis Identifies a Nine-microRNA Signature Biomarker for Diagnosis and Prognosis in Colorectal CancerCited by: 31
Author(s): Ziyang Di, Maojun Di, Weihua Fu, Qiang Tang, Yanwei Liu, Peijie Lei, Xinsheng Gu, Tong Liu, Min Sun
Software Mentions: 9
Published: almost 5 years ago
10.3390/jcm9082530
Distinctive Tissue and Serum MicroRNA Profile of IgG4-Related Ophthalmic Disease and MALT LymphomaCited by: 5
Author(s): Naoya Nezu, Yoshihiko Usui, Masaki Asakage, Hiroyuki Shimizu, Kinya Tsubota, Akitomo Narimatsu, Kazuhiko Umazume, Naoyuki Yamakawa, Shinya Ohno, Masakatsu Takanashi, Masahiko Kuroda, Hiroshi Gotô
Software Mentions: 8
Published: over 4 years ago
10.1038/s41598-021-82429-4
Molecular characterization of atherosclerosis in HIV positive personsCited by: 5
Author(s): Adam Cornwell, Rohith Palli, Meera V. Singh, Lauren Benoodt, Alicia Tyrell, Jun Abe, Giovanni Schifitto, Sanjay B. Maggirwar, Juilee Thakar
Software Mentions: 6
Published: almost 4 years ago
10.1186/s12920-021-00905-2
Bioinformatic analysis reveals an exosomal miRNA-mRNA network in colorectal cancerCited by: 17
Author(s): Jun Ma, Peilong Wang, Lei Huang, Jianxia Qiao, Jianhong Li
Software Mentions: 5
Published: almost 4 years ago
10.1186/s12916-020-01898-y
Development and validation of a novel circular RNA as an independent prognostic factor in acute myeloid leukemiaCited by: 9
Author(s): Jinghan Wang, Jiajia Pan, Shujuan Huang, Fenglin Li, Jiansong Huang, Xia Li, Qing Ling, Wenle Ye, Yungui Wang, Wenjuan Yu, Jie Jin
Software Mentions: 5
Published: almost 4 years ago
10.3390/ijms18020274
SpidermiR: An R/Bioconductor Package for Integrative Analysis with miRNA DataCited by: 45
Author(s): Claudia Cava, Antonio Colaprico, Gloria Bertoli, Alex Graudenzi, Tiago C. Silva, Catharina Olsen, Houtan Noushmehr, Gianluca Bontempi, Giancarlo Mauri, Isabella Castiglioni
Software Mentions: 3
Published: almost 8 years ago
10.1038/s41598-018-26156-3
Identification of the miRNAome of early mesoderm progenitor cells and cardiomyocytes derived from human pluripotent stem cellsCited by: 16
Author(s): Ximena Garate, Alejandro La Greca, Gabriel Neiman, Carolina Blüguermann, Natalia Lucía Santín Velazque, Lucía Moro, Carlos Luzzani, María Élida Scassa, Gustavo Sevlever, Leonardo Romorini, Santiago Gabriel Miriuka
Software Mentions: 3
Published: over 6 years ago
10.1186/s12989-020-00361-3
Serum-borne factors alter cerebrovascular endothelial microRNA expression following particulate matter exposure near an abandoned uranium mine on the Navajo NationCited by: 11
Author(s): Bethany Sanchez, Xixi Zhou, Amy S. Gardiner, Guy Herbert, Selitá Lucas, Masako Morishita, James G. Wagner, Ryan P. Lewandowski, Jack R. Harkema, Chris Shuey, Matthew J. Campen, Katherine E. Zychowski
Software Mentions: 2
Published: over 4 years ago
10.3390/ijms21030980
The Epigenetic Landscape of Vascular Calcification: An Integrative PerspectiveCited by: 30
Author(s): Yi‐Chou Hou, Cheng Wei Lu, Tzu‐Hang Yuan, Min-Tser Liao, Chia‐Ter Chao, Kuo‐Cheng Lu
Software Mentions: 2
Published: almost 5 years ago