Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41598-021-82429-4

https://doi.org/10.1038/s41598-021-82429-4

Molecular characterization of atherosclerosis in HIV positive persons

Cited by: 5
Author(s): Adam Cornwell, Rohith Palli, Meera V. Singh, Lauren Benoodt, Alicia Tyrell, Jun Abe, Giovanni Schifitto, Sanjay B. Maggirwar, Juilee Thakar
Published: over 3 years ago

Software Mentions 6

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: miRNAtap
miRNAtap: microRNA Targets - Aggregated Predictions
Papers that mentioned: 12
cran: dplyr
A Grammar of Data Manipulation
Papers that mentioned: 1,213
cran: gProfileR
Interface to the 'g:Profiler' Toolkit
Papers that mentioned: 56
cran: JASPAR
R modules for JASPAR databases: a collection of transcription factor DNA-binding preferences, modeled as matrices
Papers that mentioned: 1,283
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759