Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fgene.2021.667936

https://doi.org/10.3389/fgene.2021.667936

Cited by: 9
Author(s): Matineh Rahmatbakhsh, Alla Gagarinova, Mohan Babu
Published: almost 3 years ago

Software Mentions 21

bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: MSstats
Protein Significance Analysis in DDA, SRM and DIA for Label-free or Label-based Proteomics Experiments
Papers that mentioned: 115
bioconductor: pRoloc
A unifying bioinformatics framework for spatial proteomics
Papers that mentioned: 12
cran: bnstruct
Bayesian Network Structure Learning from Data with Missing Values
Papers that mentioned: 5
cran: cluster
"Finding Groups in Data": Cluster Analysis Extended Rousseeuw et al.
Papers that mentioned: 416
cran: clValid
Validation of Clustering Results
Papers that mentioned: 62
cran: factoextra
Extract and Visualize the Results of Multivariate Data Analyses
Papers that mentioned: 650
cran: fcm
Inference of Fuzzy Cognitive Maps (FCMs)
Papers that mentioned: 1
cran: ggfortify
Data Visualization Tools for Statistical Analysis Results
Papers that mentioned: 132
cran: MASS
Support Functions and Datasets for Venables and Ripley's MASS
Papers that mentioned: 2,353
cran: mice
Multivariate Imputation by Chained Equations
Papers that mentioned: 455
cran: ppclust
Probabilistic and Possibilistic Cluster Analysis
Papers that mentioned: 3
cran: tsne
T-Distributed Stochastic Neighbor Embedding for R (t-SNE)
Papers that mentioned: 26
cran: umap
Uniform Manifold Approximation and Projection
Papers that mentioned: 24
pypi: cluster

Papers that mentioned: 416
pypi: fcm
Python Flow Cytometry (FCM) Tools
Papers that mentioned: 1
pypi: mice
Multi-iteration Stochastic Estimator
Papers that mentioned: 455
pypi: stats
Calculator-style statistical functions
Papers that mentioned: 3,105
pypi: tsne
TSNE algorithms
Papers that mentioned: 26
pypi: umap
UNIST synthesis MAP solution
Papers that mentioned: 24