Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fgene.2019.00853

https://doi.org/10.3389/fgene.2019.00853

SeqDeχ: A Sequence Deconvolution Tool for Genome Separation of Endosymbionts From Mixed Sequencing Samples

Cited by: 0
Author(s): Alice Chiodi, Francesco Comandatore, Davide Sassera, Giulio Petroni, Claudio Bandi, Matteo Brilli
Published: about 5 years ago

Software Mentions 8

cran: dbscan
Density-Based Spatial Clustering of Applications with Noise (DBSCAN) and Related Algorithms
Papers that mentioned: 49
cran: e1071
Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien
Papers that mentioned: 419
cran: igraph
Network Analysis and Visualization
Papers that mentioned: 1,555
cran: randomForest
Breiman and Cutler's Random Forests for Classification and Regression
Papers that mentioned: 1,447
cran: uwot
The Uniform Manifold Approximation and Projection (UMAP) Method for Dimensionality Reduction
Papers that mentioned: 17
pypi: blast
a simple web-based, multi-platform music/mp3 player written in python, HTML/CSS and javascript
Papers that mentioned: 1,819
pypi: dbscan
Theoretically efficient and practical parallel DBSCAN
Papers that mentioned: 49
pypi: igraph
High performance graph data structures and algorithms
Papers that mentioned: 1,555