Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0061217

https://doi.org/10.1371/journal.pone.0061217

Cited by: 11,386
Author(s): Paul J. McMurdie, Susan Holmes
Published: about 11 years ago

Software Mentions 19

bioconductor: multtest

Resampling-based multiple hypothesis testing
Papers that mentioned: 158

bioconductor: OTUbase

Provides structure and functions for the analysis of OTU data
Papers that mentioned: 1

bioconductor: phyloseq

Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702

cran: distory

Distance Between Phylogenetic Histories
Papers that mentioned: 1

cran: foreach

Provides Foreach Looping Construct
Papers that mentioned: 50

cran: ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441

cran: knitr

A General-Purpose Package for Dynamic Report Generation in R
Papers that mentioned: 157

cran: phangorn

Phylogenetic Reconstruction and Analysis
Papers that mentioned: 192

cran: picante

Integrating Phylogenies and Ecology
Papers that mentioned: 414

cran: plyr

Tools for Splitting, Applying and Combining Data
Papers that mentioned: 468

cran: reshape

Flexibly Reshape Data
Papers that mentioned: 123

cran: RJSONIO

Serialize R Objects to JSON, JavaScript Object Notation
Papers that mentioned: 10

cran: roxygen2

In-Line Documentation for R
Papers that mentioned: 14

cran: scales

Scale Functions for Visualization
Papers that mentioned: 104

cran: vegan

Community Ecology Package
Papers that mentioned: 6,903

pypi: ggplot

ggplot for python
Papers that mentioned: 796

pypi: plyr

UNKNOWN
Papers that mentioned: 468

pypi: reshape

The missing reshape for Python
Papers that mentioned: 123

pypi: scales

Stats for Python processes
Papers that mentioned: 104