Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pgen.1003209

https://doi.org/10.1371/journal.pgen.1003209

Centromere-Like Regions in the Budding Yeast Genome

Cited by: 36
Author(s): Philippe Lefrançois, Raymond K. Auerbach, Christopher M. Yellman, G. Shirleen Roeder, M Snyder
Published: almost 12 years ago

Software Mentions 10

bioconductor: biomaRt
Interface to BioMart databases (i.e. Ensembl)
Papers that mentioned: 446
bioconductor: ChIPpeakAnno
Batch annotation of the peaks identified from either ChIP-seq, ChIP-chip experiments or any experiments resulted in large number of chromosome ranges
Papers that mentioned: 145
cran: coda
Output Analysis and Diagnostics for MCMC
Papers that mentioned: 126
cran: lattice
Trellis Graphics for R
Papers that mentioned: 251
cran: MASS
Support Functions and Datasets for Venables and Ripley's MASS
Papers that mentioned: 2,353
cran: rjags
Bayesian Graphical Models using MCMC
Papers that mentioned: 260
cran: seqinr
Biological Sequences Retrieval and Analysis
Papers that mentioned: 110
pypi: coda
File metadata tagging and organization.
Papers that mentioned: 126
pypi: lattice
A framework for developing data models, including schema development and documentation.
Papers that mentioned: 251
pypi: stats
Calculator-style statistical functions
Papers that mentioned: 3,105