Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.12688/f1000research.15666.3
https://doi.org/10.12688/f1000research.15666.3
Cited by: 33
Author(s): Angelo Duò, Mark D. Robinson, Charlotte Soneson
Published: over 3 years ago
Software Mentions 17
bioconductor: countsimQC
Compare Characteristic Features of Count Data SetsPapers that mentioned: 6
bioconductor: FlowSOM
Using self-organizing maps for visualization and interpretation of cytometry dataPapers that mentioned: 177
bioconductor: M3Drop
Michaelis-Menten Modelling of Dropouts in single-cell RNASeqPapers that mentioned: 21
bioconductor: monocle
Clustering, differential expression, and trajectory analysis for single- cell RNA-SeqPapers that mentioned: 60
bioconductor: MultiAssayExperiment
Software for the integration of multi-omics experiments in BioconductorPapers that mentioned: 16
bioconductor: scater
Single-Cell Analysis Toolkit for Gene Expression Data in RPapers that mentioned: 79
bioconductor: splatter
Simple Simulation of Single-cell RNA Sequencing DataPapers that mentioned: 6
pypi: kallisto
The Kallisto software enables the efficient calculation of atomic features that can be used within a quantitative structure-activity relationship (QSAR) approach. Furthermore, several modelling helpers are implemented.Papers that mentioned: 307
pypi: monocle
An async programming framework with a blocking look-alike syntaxPapers that mentioned: 60
pypi: splatter
Vizualizing multidimensional points in a pleasing and informative wayPapers that mentioned: 6