Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13321-016-0146-2

https://doi.org/10.1186/s13321-016-0146-2

BioTriangle: a web-accessible platform for generating various molecular representations for chemicals, proteins, DNAs/RNAs and their interactions

Cited by: 36
Author(s): Jie Dong, Zhi‐Jiang Yao, Ming Wen, Min Zhu, Ningning Wang, Hongyu Miao, Aiping Lu, Wenbin Zeng, Dong‐Sheng Cao
Published: over 8 years ago

Software Mentions 6

bioconductor: Rcpi
Molecular Informatics Toolkit for Compound-Protein Interaction in Drug Discovery
Papers that mentioned: 13
cran: kmer
Fast K-Mer Counting and Clustering for Biological Sequence Analysis
Papers that mentioned: 240
cran: protr
Generating Various Numerical Representation Schemes for Protein Sequences
Papers that mentioned: 11
pypi: Matador
Change management for Agresso systems
Papers that mentioned: 39
pypi: propy
Library of class property creation functions for type conversion and validation.
Papers that mentioned: 35
pypi: repDNA
a Python package to generate various modes of feature vectors for DNA sequences by incorporating user-defined physicochemical properties and sequence-order effects
Papers that mentioned: 19