Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13068-018-1036-9

https://doi.org/10.1186/s13068-018-1036-9

Genome-resolved metagenomics of sugarcane vinasse bacteria

Cited by: 16
Author(s): Noriko A. Cassman, Késia Silva Lourenço, Janaína Braga do Carmo, Heitor Cantarella, Eiko E. Kuramae
Published: almost 7 years ago

Software Mentions 6

pypi: bash

Bash for Python
Papers that mentioned: 65

pypi: diamond

Smart data producer for graphite graphing package
Papers that mentioned: 68

pypi: hclust2

Hclust2 is a handy tool for plotting heat-maps with several useful options to produce high quality figures that can be used in publication
Papers that mentioned: 11

pypi: hmm

Functions for inference on HMMs
Papers that mentioned: 55

pypi: humann2

HUMAnN2: The HMP Unified Metabolic Analysis Network 2
Papers that mentioned: 7

pypi: MicrobeCensus

A command-line tool for estimating average genome size from shotgun sequence data
Papers that mentioned: 25