Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-016-0999-8

https://doi.org/10.1186/s13059-016-0999-8

Genomic alterations underlie a pan-cancer metabolic shift associated with tumour hypoxia

Cited by: 64
Author(s): Syed Haider, Alan McIntyre, Ruud G.P.M. van Stiphout, Laura Winchester, Simon Wigfield, Adrian L. Harris, Francesca M. Buffa
Published: over 8 years ago

Software Mentions 10

bioconductor: beadarray
Quality assessment and low-level analysis for Illumina BeadArray data
Papers that mentioned: 94
bioconductor: survcomp
Performance Assessment and Comparison for Survival Analysis
Papers that mentioned: 117
cran: glmnet
Lasso and Elastic-Net Regularized Generalized Linear Models
Papers that mentioned: 1,607
cran: glmpath
L1 Regularization Path for Generalized Linear Models and Cox Proportional Hazards Model
Papers that mentioned: 11
cran: PSCBS
Analysis of Parent-Specific DNA Copy Numbers
Papers that mentioned: 6
cran: randomForestSRC
Fast Unified Random Forests for Survival, Regression, and Classification (RF-SRC)
Papers that mentioned: 143
cran: survival
Survival Analysis
Papers that mentioned: 1,690
pypi: glmnet
Python wrapper for glmnet
Papers that mentioned: 1,607
pypi: rawcopy
hardlink-aware low-level directory tree copy
Papers that mentioned: 1
pypi: survival
Add static script_dir() method to Path
Papers that mentioned: 1,690