Papers: 10.1186/s12859-020-03652-w
https://doi.org/10.1186/s12859-020-03652-w
SpectralTAD: an R package for defining a hierarchy of topologically associated domains using spectral clustering
Cited by: 22
Author(s): Kellen Garrison Cresswell, John C. Stansfield, Mikhail G. Dozmorov
Published: about 5 years ago
Software Mentions 7
bioconductor: LOLA
Locus overlap analysis for enrichment of genomic rangesPapers that mentioned: 56
Very Likely Science (100)
bioconductor: rGREAT
GREAT Analysis - Functional Enrichment on Genomic RegionsPapers that mentioned: 5
Very Likely Science (100)
bioconductor: SpectralTAD
SpectralTAD: Hierarchical TAD detection using spectral clusteringPapers that mentioned: 5
Very Likely Science (100)
Very Likely Science (75)
cran: MASS
Support Functions and Datasets for Venables and Ripley's MASSPapers that mentioned: 2,353
Very Likely Science (100)
cran: TopDom
An Efficient and Deterministic Method for Identifying Topological Domains in GenomesPapers that mentioned: 31
Very Likely Science (85)
pypi: HiCExplorer
Set of programs to process, analyze and visualize Hi-C dataPapers that mentioned: 33
Very Likely Science (80)