Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: bioconductor: rGREAT
https://packages.ecosyste.ms/registries/bioconductor.org/packages/rGREAT
GREAT Analysis - Functional Enrichment on Genomic Regions
1 version
Latest release: 10 months ago
3 dependent packages
40,019 downloads total
Papers Mentioning rGREAT 5
10.1186/s13059-021-02335-w
Human brain region-specific variably methylated regions are enriched for heritability of distinct neuropsychiatric traitsCited by: 15
Author(s): Lindsay F. Rizzardi, Peter Hickey, Adrian Idrizi, Rakel Tryggvadóttir, Colin M. Callahan, K Stephens, Sean D. Taverna, Hao Zhang, Sinan Ramazanoglu, Kasper D. Hansen, Andrew P. Feinberg
Software Mentions: 16
Published: over 3 years ago
10.1186/s12859-020-03652-w
SpectralTAD: an R package for defining a hierarchy of topologically associated domains using spectral clusteringCited by: 22
Author(s): Kellen Garrison Cresswell, John C. Stansfield, Mikhail G. Dozmorov
Software Mentions: 7
Published: about 4 years ago
10.3390/ijms22010078
Alterations in the Genomic Distribution of 5hmC in In Vivo Aged Human Skin FibroblastsCited by: 10
Author(s): Paulina Kołodziej-Wojnar, Joanna Borkowska, Zofia Wicik, Anna Domaszewska-Szostek, Jacek Połosak, Marta Cąkała-Jakimowicz, Olga Bujanowska, Monika Puzianowska-Kuźnicka
Software Mentions: 6
Published: over 3 years ago
10.3389/fgene.2020.00158
TADCompare: An R Package for Differential and Temporal Analysis of Topologically Associated DomainsCited by: 32
Author(s): Kellen Garrison Cresswell, Mikhail G. Dozmorov
Software Mentions: 4
Published: over 4 years ago
10.3390/genes10010028
m6A-Dependent RNA Dynamics in T Cell DifferentiationCited by: 30
Author(s): Mattia Furlan, Eugenia Galeota, Stefano de Pretis, Michele Caselle, Mattia Pelizzola
Software Mentions: 3
Published: over 5 years ago