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Papers: 10.1186/1471-2105-11-194

https://doi.org/10.1186/1471-2105-11-194

Starr: Simple Tiling ARRay analysis of Affymetrix ChIP-chip data

Cited by: 32
Author(s): Benedikt Zacher, Pei Fen Kuan, Achim Tresch
Published: over 15 years ago

Software Mentions 12

bioconductor: ACME
Algorithms for Calculating Microarray Enrichment (ACME)
Papers that mentioned: 63
Very Likely Science (100)
bioconductor: affxparser
Affymetrix File Parsing SDK
Papers that mentioned: 13
Very Likely Science (100)
bioconductor: affy
Methods for Affymetrix Oligonucleotide Arrays
Papers that mentioned: 989
Very Likely Science (98)
bioconductor: BAC
Papers that mentioned: 14
Unlikely Science (0)
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
Very Likely Science (78)
bioconductor: oligo
Preprocessing tools for oligonucleotide arrays
Papers that mentioned: 204
Very Likely Science (90)
bioconductor: Ringo
R Investigation of ChIP-chip Oligoarrays
Papers that mentioned: 36
Very Likely Science (90)
bioconductor: vsn
Variance stabilization and calibration for microarray data
Papers that mentioned: 91
Very Likely Science (100)
cran: MASS
Support Functions and Datasets for Venables and Ripley's MASS
Papers that mentioned: 2,353
Very Likely Science (100)
cran: MAT
Multidimensional Adaptive Testing
Papers that mentioned: 216
Very Likely Science (83)
cran: pspline
Penalized Smoothing Splines
Papers that mentioned: 9
Very Likely Science (83)
pypi: oligo
UNOFFICIAL Python client for i-DE
Papers that mentioned: 204
Very Likely Science (65)