Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1128/mBio.01054-19
https://doi.org/10.1128/mBio.01054-19
Cited by: 28
Author(s): Miles Richardson, Neil Gottel, Jack A. Gilbert, Simon Lax
Published: over 4 years ago
Software Mentions 18
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census dataPapers that mentioned: 1,702
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of GraphicsPapers that mentioned: 11,441
cran: randomForest
Breiman and Cutler's Random Forests for Classification and RegressionPapers that mentioned: 1,447
pypi: ape
A Productive Environment - make/rake/ant/fab-like system with support for FOSDPapers that mentioned: 918
pypi: illumina-utils
A library and collection of scripts to work with Illumina paired-end data (for CASAVA 1.8+).Papers that mentioned: 22