Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/molbev/msab063

https://doi.org/10.1093/molbev/msab063

Extensive Genome-Wide Phylogenetic Discordance Is Due to Incomplete Lineage Sorting and Not Ongoing Introgression in a Rapidly Radiated Bryophyte Genus

Cited by: 42
Author(s): Olena Meleshko, Michael D. Martin, Thorfinn Sand Korneliussen, C. Schluechter, P. Lamkowski, Jeremy Schmutz, Adam Healey, Bryan Piatkowski, A. Jonathan Shaw, David J. Weston, Kjell Ivar Flatberg, Péter Szövényi, Kristian Hassel, Hans K. Stenøien
Published: over 3 years ago

Software Mentions 14

cran: adegenet
Exploratory Analysis of Genetic and Genomic Data
Papers that mentioned: 767
cran: ape
Analyses of Phylogenetics and Evolution
Papers that mentioned: 918
cran: corrplot
Visualization of a Correlation Matrix
Papers that mentioned: 1,077
cran: dendextend
Extending 'dendrogram' Functionality in R
Papers that mentioned: 201
cran: fasta
Fast Adaptive Shrinkage/Thresholding Algorithm
Papers that mentioned: 848
cran: hierfstat
Estimation and Tests of Hierarchical F-Statistics
Papers that mentioned: 178
cran: lattice
Trellis Graphics for R
Papers that mentioned: 251
cran: phytools
Phylogenetic Tools for Comparative Biology (and Other Things)
Papers that mentioned: 586
cran: vcfR
Manipulate and Visualize VCF Data
Papers that mentioned: 62
pypi: ape
A Productive Environment - make/rake/ant/fab-like system with support for FOSD
Papers that mentioned: 918
pypi: environment
This library provides parsing and validation of environment variables.
Papers that mentioned: 569
pypi: fasta
The fasta python package enables you to deal with biological sequence files easily.
Papers that mentioned: 848
pypi: lattice
A framework for developing data models, including schema development and documentation.
Papers that mentioned: 251
pypi: phytools
Useful tools for physicists.
Papers that mentioned: 586