Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/bioinformatics/btz698

https://doi.org/10.1093/bioinformatics/btz698

scds: computational annotation of doublets in single-cell RNA sequencing data

Cited by: 114
Author(s): Abha Bais, Dennis Kostka
Published: about 5 years ago

Software Mentions 7

bioconductor: scds
In-Silico Annotation of Doublets for Single Cell RNA Sequencing Data
Papers that mentioned: 7
cran: PRROC
Precision-Recall and ROC Curves for Weighted and Unweighted Data
Papers that mentioned: 35
cran: Rtsne
T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation
Papers that mentioned: 255
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
pypi: hybrid
hybrid tools set
Papers that mentioned: 20
pypi: PhenoGraph
Graph-based clustering for high-dimensional single-cell data
Papers that mentioned: 96
pypi: scrublet
Doublet prediction in single-cell RNA-sequencing data
Papers that mentioned: 9