Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41598-020-67753-5

https://doi.org/10.1038/s41598-020-67753-5

Quiescent stem cell marker genes in glioma gene networks are sufficient to distinguish between normal and glioblastoma (GBM) samples

Cited by: 13
Author(s): Shradha Mukherjee
Published: over 4 years ago

Software Mentions 14

bioconductor: edgeR

Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568

bioconductor: GeneOverlap

Test and visualize gene overlaps
Papers that mentioned: 40

bioconductor: limma

Linear Models for Microarray Data
Papers that mentioned: 7,776

bioconductor: sva

Surrogate Variable Analysis
Papers that mentioned: 511

cran: corrplot

Visualization of a Correlation Matrix
Papers that mentioned: 1,077

cran: ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441

cran: MEGENA

Multiscale Clustering of Geometrical Network
Papers that mentioned: 23

cran: sra

Selection Response Analysis
Papers that mentioned: 14

cran: SWIM

Scenario Weights for Importance Measurement
Papers that mentioned: 48

cran: VennDiagram

Generate High-Resolution Venn and Euler Plots
Papers that mentioned: 626

cran: WGCNA

Weighted Correlation Network Analysis
Papers that mentioned: 3,479

pypi: HTSeq

A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071

pypi: package

package is a package to package your package
Papers that mentioned: 1,300

pypi: sra

A simple deploy tool
Papers that mentioned: 14