Packages with Software Mentions in Scientific Papers

pypi: Candela

Python shell creation library
Papers that mentioned: 2

Very Likely Science (65)

cran: roadoi

Find Free Versions of Scholarly Publications via Unpaywall
Papers that mentioned: 2

Very Likely Science (75)

pypi: careless

Merging crystallography data without much physics.
Papers that mentioned: 2

Very Likely Science (100)

pypi: metis

METIS wrapper using ctypes
Papers that mentioned: 2

Very Likely Science (85)

pypi: metrix

Utilities to calculate metrics of applications and functions
Papers that mentioned: 2

Very Likely Science (65)

pypi: metronome

metronome diagnostics bot
Papers that mentioned: 2

Likely Science (55)

cran: sparseLDA

Sparse Discriminant Analysis
Papers that mentioned: 2

Very Likely Science (85)

pypi: configuration

multi-level unified configuration
Papers that mentioned: 2

Very Likely Science (65)

pypi: Corpus

A simple English dictionary for Python
Papers that mentioned: 2

Very Likely Science (65)

pypi: genomepy

Genes and genomes at your fingertips
Papers that mentioned: 2

Very Likely Science (100)

pypi: cryolo

Picking procedure for cryo em single particle analysis
Papers that mentioned: 2

Very Likely Science (90)

pypi: mgv

An open-source nodal pipeline manager
Papers that mentioned: 2

Very Likely Science (65)

pypi: pet

This program or lib can download torrent file throughemail account and send the torrent file to transmission web controller
Papers that mentioned: 2

Likely Science (40)

pypi: mhcflurry

MHC Binding Predictor
Papers that mentioned: 2

Very Likely Science (100)

pypi: Dem

A python library to make using lists more easy
Papers that mentioned: 2

Very Likely Science (65)

pypi: discover

Test discovery for unittest. Backported from Python 2.7 for Python 2.4+
Papers that mentioned: 2

Very Likely Science (65)

pypi: CellMethy

Identifying focal full methylation of cell subpopulation and inferring fraction
Papers that mentioned: 2

Very Likely Science (80)

pypi: rta

Retention Time Alignment for LC-IM-MS.
Papers that mentioned: 2

Very Likely Science (80)

pypi: temporal

Track Django temporal models.
Papers that mentioned: 2

Very Likely Science (65)

pypi: Dulcinea

A package of modules useful for developing Quixote/Durus applications.
Papers that mentioned: 2

Very Likely Science (65)

pypi: OpenNMT-py

A python implementation of OpenNMT
Papers that mentioned: 2

Very Likely Science (100)

pypi: peyotl

Library for interacting with Open Tree of Life resources
Papers that mentioned: 2

Very Likely Science (80)

pypi: environmental

Map a python configuration from environment variables
Papers that mentioned: 2

Very Likely Science (65)

pypi: CGNS

Pythonbindings for CGNS library
Papers that mentioned: 2

Very Likely Science (80)

pypi: chainmail

Sending email is hard. Let's go shopping!
Papers that mentioned: 2

Likely Science (40)

pypi: charge

classical electrodynamics of charged particle
Papers that mentioned: 2

Very Likely Science (80)

pypi: check

Check your server like a boss.
Papers that mentioned: 2

Very Likely Science (65)

pypi: MIDIA

Description.
Papers that mentioned: 2

Very Likely Science (80)

cran: Pursuit

Projection Pursuit
Papers that mentioned: 2

Very Likely Science (75)

pypi: runner.py

runner.py Run, Attach, Schedule, Repeat, Chain and React to commands.
Papers that mentioned: 2

Very Likely Science (65)

pypi: cicero

Cicero - Serving presentation slides written in Markdown.
Papers that mentioned: 2

Very Likely Science (85)

pypi: thermo

Chemical properties component of Chemical Engineering Design Library (ChEDL)
Papers that mentioned: 2

Very Likely Science (100)

cran: phenomap

Projecting Satellite-Derived Phenology in Space
Papers that mentioned: 2

Very Likely Science (100)

cran: PheNorm

Unsupervised Gold-Standard Label Free Phenotyping Algorithm for EHR Data
Papers that mentioned: 2

Very Likely Science (100)

cran: regions

Processing Regional Statistics
Papers that mentioned: 2

Very Likely Science (85)

cran: RRreg

Correlation and Regression Analyses for Randomized Response Data
Papers that mentioned: 2

Very Likely Science (95)

cran: repeated

Non-Normal Repeated Measurements Models
Papers that mentioned: 2

Very Likely Science (75)

cran: PhylogeneticEM

Automatic Shift Detection using a Phylogenetic EM
Papers that mentioned: 2

Very Likely Science (100)

pypi: gl

Get Localization Command-Line Interface
Papers that mentioned: 2

Very Likely Science (65)

pypi: FeatureSelector

Package used to implement diverse feature selection methods
Papers that mentioned: 2

Very Likely Science (65)

pypi: Glia

Official Desktop Client for Glial Engines
Papers that mentioned: 2

Very Likely Science (80)

pypi: Miniature

Multi backend image processing and thumbnailer
Papers that mentioned: 2

Very Likely Science (65)

cran: phyloseqGraphTest

Graph-Based Permutation Tests for Microbiome Data
Papers that mentioned: 2

Very Likely Science (75)

pypi: minibar

Simple text progress bar library
Papers that mentioned: 2

Very Likely Science (65)

pypi: minid

FAIR Research Minimum Viable Identifier
Papers that mentioned: 2

Very Likely Science (90)

pypi: firebase

Python interface to the Google's Firebase REST APIs
Papers that mentioned: 2

Very Likely Science (65)

pypi: fix

Simple test fixtures.
Papers that mentioned: 2

Very Likely Science (65)

cran: phyloTop

Calculating Topological Properties of Phylogenies
Papers that mentioned: 2

Very Likely Science (100)

pypi: FlyBrainLab

FlyBrainLab User-side Backend
Papers that mentioned: 2

Very Likely Science (65)

pypi: JCC

a C++ code generator for calling Java from C++/Python
Papers that mentioned: 2

Very Likely Science (65)

pypi: MiniSom

Minimalistic implementation of the Self Organizing Maps (SOM)
Papers that mentioned: 2

Very Likely Science (80)

pypi: eight

Python 2 to the power of 3. A lightweight porting helper library.
Papers that mentioned: 2

Very Likely Science (65)

cran: RSDA

R to Symbolic Data Analysis
Papers that mentioned: 2

Very Likely Science (85)

pypi: civic2clinvar

extraction of CIViC variants into the clinvar submission format
Papers that mentioned: 2

Very Likely Science (100)

pypi: friar

A simple Python wrapper for jsonrpc interfaces
Papers that mentioned: 2

Very Likely Science (65)

pypi: s3db

A simple document db using s3 buckets
Papers that mentioned: 2

Very Likely Science (65)

pypi: optics

Transfer matrix simulation of 1D optical multilayers
Papers that mentioned: 2

Very Likely Science (75)

pypi: Eir

Helps model epidemics using spatial models
Papers that mentioned: 2

Very Likely Science (90)

pypi: clara

Conversational chit-chat utility agent
Papers that mentioned: 2

Unlikely Science (15)

cran: xmeta

A Toolbox for Multivariate Meta-Analysis
Papers that mentioned: 2

Very Likely Science (85)

pypi: Mirador

client for the Mirador image moderation API. (mirador.im)
Papers that mentioned: 2

Very Likely Science (65)

pypi: safari

Python utilities for Safari.
Papers that mentioned: 2

Very Likely Science (65)

pypi: Gates

Minimal, fast and intuitive REST HTTP services in python
Papers that mentioned: 2

Possibly Science (35)

pypi: SAGA-optimize

Optimization method for solving boundary-value inverse problem based on a combined simulated annealing and genetic algorithm
Papers that mentioned: 2

Very Likely Science (100)

pypi: cleaver

Bloody simple A/B testing for Python WSGI applications
Papers that mentioned: 2

Very Likely Science (80)

pypi: clhs

Conditioned Latin Hypercube Sampling in Python
Papers that mentioned: 2

Very Likely Science (100)

pypi: readFile

Is used to read the sketch.txt file
Papers that mentioned: 2

Very Likely Science (65)

pypi: miso

Python scripts for training CNNs for particle classification
Papers that mentioned: 2

Very Likely Science (100)

pypi: clinker

Gene cluster comparison figure generator
Papers that mentioned: 2

Very Likely Science (100)

cran: abcdeFBA

Papers that mentioned: 2

Unlikely Science (0)

cran: abctools

Tools for ABC Analyses
Papers that mentioned: 2

Very Likely Science (97)

bioconductor: eudysbiome

Cartesian plot and contingency test on 16S Microbial data
Papers that mentioned: 2

Very Likely Science (83)

pypi: genysis

generative design
Papers that mentioned: 2

Very Likely Science (65)

cran: acebayes

Optimal Bayesian Experimental Design using the ACE Algorithm
Papers that mentioned: 2

Very Likely Science (93)

bioconductor: DepecheR

Determination of essential phenotypic elements of clusters in high-dimensional entities
Papers that mentioned: 2

Very Likely Science (90)

cran: addreg

Additive Regression for Discrete Data
Papers that mentioned: 2

Very Likely Science (97)

cran: rsvd

Randomized Singular Value Decomposition
Papers that mentioned: 2

Very Likely Science (100)

cran: admix

Package Admix for Admixture (aka Contamination) Models
Papers that mentioned: 2

Very Likely Science (100)

pypi: sampler

Sample data generator for Python
Papers that mentioned: 2

Very Likely Science (65)

cran: rredlist

'IUCN' Red List Client
Papers that mentioned: 2

Very Likely Science (75)

pypi: missingpy

Missing Data Imputation for Python
Papers that mentioned: 2

Very Likely Science (65)

cran: algo

Implement an Address Search Auto Completion Menu on 'Shiny' Text Inputs Using the 'Algolia Places' 'Javascript' Library
Papers that mentioned: 2

Very Likely Science (75)

pypi: mitos

MITOS: de novo annotation of metazoan mitochondrial genomes
Papers that mentioned: 2

Very Likely Science (80)

pypi: Clockwork

Python wrapper for the clockwork SMS Api
Papers that mentioned: 2

Very Likely Science (65)

cran: archive

Multi-Format Archive and Compression Support
Papers that mentioned: 2

Very Likely Science (75)

cran: FcircSEC

Full Length Circular RNA Sequence Extraction and Classification
Papers that mentioned: 2

Very Likely Science (75)

cran: anomalize

Tidy Anomaly Detection
Papers that mentioned: 2

Very Likely Science (100)

cran: aTSA

Alternative Time Series Analysis
Papers that mentioned: 2

Very Likely Science (93)

pypi: mittens

Fast GloVe with optional retrofitting.
Papers that mentioned: 2

Very Likely Science (100)

cran: archetypes

Archetypal Analysis
Papers that mentioned: 2

Very Likely Science (85)

cran: argparser

Command-Line Argument Parser
Papers that mentioned: 2

Very Likely Science (75)

bioconductor: mpra

Analyze massively parallel reporter assays
Papers that mentioned: 2

Very Likely Science (100)

cran: rvTDT

population control weighted rare-variants TDT
Papers that mentioned: 2

Very Likely Science (75)

pypi: mixture

Mixin classes for great objects !
Papers that mentioned: 2

Very Likely Science (60)

pypi: clr

🌈 Terminal string styling
Papers that mentioned: 2

Very Likely Science (65)

cran: ascii

Export R Objects to Several Markup Languages
Papers that mentioned: 2

Very Likely Science (75)

pypi: mkdir

mkdir
Papers that mentioned: 2

Very Likely Science (65)

pypi: pair

a ladder pairing/matching library
Papers that mentioned: 2

Very Likely Science (65)

cran: asdreader

Reading ASD Binary Files in R
Papers that mentioned: 2

Very Likely Science (80)

bioconductor: msmsEDA

Exploratory Data Analysis of LC-MS/MS data by spectral counts
Papers that mentioned: 2

Very Likely Science (100)