pypi: tox
tox is a generic virtualenv management and test command line tool
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pypi: text2vec
Text to vector Tool, encode text
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cran: trajr
Animal Trajectory Analysis
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pypi: Pathomx
Metabolic pathway visualisation and analysis.
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cran: syuzhet
Extracts Sentiment and Sentiment-Derived Plot Arcs from Text
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pypi: paleomix
Bioinformatics pipelines for HTS data
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pypi: nwalign
Needleman-Wunsch global sequence alignment
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pypi: Slowloris
Low bandwidth DoS tool. Slowloris rewrite in Python.
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pypi: PyFBA
A Python implementation of flux balance analysis
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cran: GSDA
Gene Set Distance Analysis (GSDA)
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pypi: ud
A simple Urban Dictionary wrapper.
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pypi: myfitnesspal
Access health and fitness data stored in Myfitnesspal
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bioconductor: qusage
qusage: Quantitative Set Analysis for Gene Expression
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pypi: histogram
histogram: fundamental data object for scientific data reduction and analysis
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pypi: automatic
Client library for the Automatic API
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pypi: Aligator
A simple printer of nested lists
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pypi: MethylPurify
Methylation subclone detection
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cran: usethis
Automate Package and Project Setup
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cran: longpower
Sample Size Calculations for Longitudinal Data
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cran: ggmuller
Create Muller Plots of Evolutionary Dynamics
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pypi: raw
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pypi: Erebus
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cran: PCDimension
Finding the Number of Significant Principal Components
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pypi: cisco
A very basic calculator
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cran: metamicrobiomeR
Microbiome Data Analysis & Meta-Analysis with GAMLSS-BEZI & Random Effects
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bioconductor: CGHregions
Dimension Reduction for Array CGH Data with Minimal Information Loss.
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cran: muStat
Prentice Rank Sum Test and McNemar Test
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pypi: heat
A framework for high-performance data analytics and machine learning.
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pypi: ubuntu
Python for iran.
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pypi: RedList
A simple schedule managing cli app
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cran: RItools
Randomization Inference Tools
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pypi: ecopy
EcoPy: Ecological Data Analysis in Python
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cran: MBC
Multivariate Bias Correction of Climate Model Outputs
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pypi: module
A warning to be more careful when pulling in dependencies
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pypi: kin
A simple project.pbxproj verifier
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cran: RInSp
R Individual Specialization
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cran: AssocTests
Genetic Association Studies
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pypi: fuzzyjoin
Join two tables by a fuzzy comparison of text columns.
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bioconductor: SPsimSeq
Semi-parametric simulation tool for bulk and single-cell RNA sequencing data
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cran: OCNet
Optimal Channel Networks
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cran: PhViD
PharmacoVigilance Signal Detection
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cran: parallelDist
Parallel Distance Matrix Computation using Multiple Threads
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cran: cusum
Cumulative Sum (CUSUM) Charts for Monitoring of Hospital Performance
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cran: windex
Analysing Convergent Evolution using the Wheatsheaf Index
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cran: lle
Locally linear embedding
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pypi: refget
Python client for refget
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cran: SemiPar
Semiparametic Regression
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cran: heemod
Markov Models for Health Economic Evaluations
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pypi: past
[Experimental] Run Python 2 code from Python 3
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pypi: RIFT
RIFT parameter estimation pipeline. Note branch used is temp-RIT-Tides-port_python3_restructure_package (which will become master shortly)!
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cran: Kurt
Performs Kurtosis-Based Statistical Analyses
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pypi: TaskTracker
task management software used on coactivate.org
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pypi: pylint
python code static checker
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cran: sisVIVE
Some Invalid Some Valid Instrumental Variables Estimator
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pypi: dolfin-adjoint
High-level automatic differentiation library for FEniCS.
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pypi: batch
Batch script (Windows CMD) lexer
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pypi: pub
Python Utility Belt
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cran: occ
Estimates PET Neuroreceptor Occupancies
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pypi: long
Add a short description here!
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cran: pdist
Partitioned Distance Function
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pypi: PS3
Provides support for games running on the PS3
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pypi: penelope
Penelope is a multi-tool for creating, editing and converting dictionaries, especially for eReader devices
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pypi: imagelab
This package is DTU Compute imagelab SDK for research in image analysis, computer vision, and computational imaging.
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pypi: ana
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pypi: edit
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cran: rex
Friendly Regular Expressions
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bioconductor: RLMM
A Genotype Calling Algorithm for Affymetrix SNP Arrays
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pypi: opus
Python bindings to the libopus, IETF low-delay audio codec
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pypi: pycircstat
Toolbox for circular statistics with Python
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cran: histogram
Construction of Regular and Irregular Histograms with Different Options for Automatic Choice of Bins
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bioconductor: sigFeature
sigFeature: Significant feature selection using SVM-RFE & t-statistic
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cran: mGSZ
Gene set analysis based on GSZ-scoring function and asymptotic p-value
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pypi: mata
Medieval Attack-Trade-Alliance Game Engine
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pypi: nt
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cran: HLMdiag
Diagnostic Tools for Hierarchical (Multilevel) Linear Models
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pypi: protean
Protean Application Framework
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pypi: element
A random test lib
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cran: chromoMap
Interactive Genomic Visualization of Biological Data
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pypi: Optunity
Optimization routines for hyperparameter tuning.
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pypi: qmpy
Suite of computational materials science tools
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pypi: functional
Tools for functional programming in python
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cran: MCMC.OTU
Bayesian Analysis of Multivariate Counts Data in DNA Metabarcoding and Ecology
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bioconductor: RareVariantVis
A suite for analysis of rare genomic variants in whole genome sequencing data
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cran: PHYLOGR
Functions for Phylogenetically Based Statistical Analyses
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cran: MIAmaxent
A Modular, Integrated Approach to Maximum Entropy Distribution Modeling
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cran: nbpMatching
Functions for Optimal Non-Bipartite Matching
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cran: stdReg
Regression Standardization
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cran: mp
Multidimensional Projection Techniques
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pypi: ssbio
Tools to enable structural systems biology
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pypi: pmc
A module to control the mplayer
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cran: easyCODA
Compositional Data Analysis in Practice
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pypi: strs
Easy string tools for the shell
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bioconductor: GUIDEseq
GUIDE-seq and PEtag-seq analysis pipeline
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cran: kSamples
K-Sample Rank Tests and their Combinations
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pypi: swing
Configuration switcher by an environment variable inspired by Common Lisp's envy
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pypi: Meneco
Metabolic Network Completion. Compute minimal completions to your draft network with reactions from a repair network.
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cran: TSVC
Tree-Structured Modelling of Varying Coefficients
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cran: mpath
Regularized Linear Models
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pypi: xrayutilities
package for x-ray diffraction data evaluation
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pypi: five
Gives you five. A library to overcomplicate `5`
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