Projects: bioconductor: infercnv
https://packages.ecosyste.ms/registries/bioconductor.org/packages/infercnv
Infer Copy Number Variation from Single-Cell RNA-Seq Data
1 version
Latest release: over 2 years ago
64,364 downloads total
Enhanced Analysis
Educational Contributors:
mbrown18@bu.edu
jennifer.wokaty@sph.cuny.edu
Repository Activity:
Repository Owner:
Broad Institute (organization)
Broad Institute of MIT and Harvard Academic
Broad Institute of MIT and Harvard Academic
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
-
+40
Educational commit emails
2 contributors with educational email addresses -
+20
Academic repository owner
Repository owned by academic institution -
+15
Institutional repository owner
Repository owned by research institution -
+2
Science terms in README
1 scientific terms found in README -
+5
Research institution maintainers
1 maintainers with research institution indicators
Penalties:
-
-10
No science terms in description
No scientific terms found in description
Very Likely Science (100)
Papers Mentioning infercnv 4
10.3389/fonc.2021.709210
Single-Cell Transcriptomics Reveals the Complexity of the Tumor Microenvironment of Treatment-Naive OsteosarcomaCited by: 45
Author(s): Yun Liu, Wei Feng, Yan Dai, Mengying Bao, Zhenchao Yuan, Mingwei He, Zhaojie Qin, Shijie Liao, Jun He, Qian Huang, Zhenyuan Yu, Yanyu Zeng, Binqian Guo, Rong Huang, Rongliang Yang, Yonghua Jiang, Jinling Liao, Zengming Xiao, Xinli Zhan, Chengsen Lin, Jiake Xu, Yu Ye, Jie Ma, Qingjun Wei, Zengnan Mo
Software Mentions: 9
Published: almost 5 years ago
10.3389/fonc.2020.596318
Single-Cell RNA-Seq Analysis Reveals Microenvironmental Infiltration of Plasma Cells and Hepatocytic Prognostic Markers in HCC With CirrhosisCited by: 40
Author(s): Siwen Zhang, Zhenhao Liu, Dan Wu, Lanming Chen, Lu Xie
Software Mentions: 7
Published: over 5 years ago
10.1038/s41598-020-64929-x
Single-cell analysis of childhood leukemia reveals a link between developmental states and ribosomal protein expression as a source of intra-individual heterogeneityCited by: 29
Author(s): Maxime Caron, Pascal St-Onge, Thomas Sontag, Yu Chang Wang, Chantal Richer, Jiannis Ragoussis, Daniel Sinnett, Guillaume Bourque
Software Mentions: 6
Published: about 6 years ago
10.1002/ctm2.350
Landscape and dynamics of single tumor and immune cells in early and advanced‐stage lung adenocarcinomaCited by: 43
Author(s): Zhencong Chen, Yiwei Huang, Zhengyang Hu, Mengnan Zhao, Ming Li, Guoshu Bi, Yuansheng Zheng, Jiaqi Liang, Tao Lu, Wei Jiang, Songtao Xu, Cheng Zhan, Junjie Xi, Qun Wang, Lijie Tan
Software Mentions: 5
Published: over 5 years ago