Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fonc.2020.596318

https://doi.org/10.3389/fonc.2020.596318

Single-Cell RNA-Seq Analysis Reveals Microenvironmental Infiltration of Plasma Cells and Hepatocytic Prognostic Markers in HCC With Cirrhosis

Cited by: 40
Author(s): Siwen Zhang, Zhenhao Liu, Dan Wu, Lanming Chen, Lu Xie
Published: about 4 years ago

Software Mentions 7

bioconductor: clusterProfiler
A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223
bioconductor: infercnv
Infer Copy Number Variation from Single-Cell RNA-Seq Data
Papers that mentioned: 4
bioconductor: monocle
Clustering, differential expression, and trajectory analysis for single- cell RNA-Seq
Papers that mentioned: 60
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
pypi: monocle
An async programming framework with a blocking look-alike syntax
Papers that mentioned: 60