bioconductor: codelink
Manipulation of Codelink microarray data
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cran: rv
Simulation-Based Random Variable Objects
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cran: diffusionMap
Diffusion Map
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cran: emdist
Earth Mover's Distance
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cran: SpaDES
Develop and Run Spatially Explicit Discrete Event Simulation Models
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pypi: infomap
Infomap network clustering algorithm
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cran: DiffNet
Detection of Statistically Significant Changes in Complex Biological Networks
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pypi: tagging
Generic tagging application for Django
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cran: magic
Create and Investigate Magic Squares
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pypi: compete
Competitive Coding in Python!
Papers that mentioned: 4
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bioconductor: GOexpress
Visualise microarray and RNAseq data using gene ontology annotations
Papers that mentioned: 4
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bioconductor: Qtlizer
Comprehensive QTL annotation of GWAS results
Papers that mentioned: 4
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cran: RZooRoH
Partitioning of Individual Autozygosity into Multiple Homozygous-by-Descent Classes
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cran: eChem
Simulations for Electrochemistry Experiments
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pypi: mlt
Machine Learning Container Templates
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pypi: nt
Papers that mentioned: 4
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pypi: BHC
A Python package to generate Bayesian hierarchical clusters to a supplied data
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pypi: mata
Medieval Attack-Trade-Alliance Game Engine
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pypi: long
Add a short description here!
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cran: sisVIVE
Some Invalid Some Valid Instrumental Variables Estimator
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cran: histogram
Construction of Regular and Irregular Histograms with Different Options for Automatic Choice of Bins
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pypi: TaskTracker
task management software used on coactivate.org
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bioconductor: SPsimSeq
Semi-parametric simulation tool for bulk and single-cell RNA sequencing data
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pypi: ubuntu
Python for iran.
Papers that mentioned: 4
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pypi: vec
A 2-dimensional vector class designed to be convenient
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cran: translate
Papers that mentioned: 4
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pypi: fuzzywuzzy
Fuzzy string matching in python
Papers that mentioned: 4
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pypi: 4chan
A python script that downloads all images from a 4chan thread.
Papers that mentioned: 4
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cran: spgrass6
Interface Between GRASS 6+ Geographical Information System and R
Papers that mentioned: 4
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pypi: ud
A simple Urban Dictionary wrapper.
Papers that mentioned: 4
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pypi: SPLA
Papers that mentioned: 4
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pypi: ZOE
A trivial OpenGL rendering engine written entirely in Python
Papers that mentioned: 4
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pypi: reporter
Flexible text extraction from HTML in Python.
Papers that mentioned: 4
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pypi: repository
repository
Papers that mentioned: 4
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pypi: retrieve
Retrieve pre-trained models and cache it locally
Papers that mentioned: 4
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cran: ui
Uncertainty Intervals and Sensitivity Analysis for Missing Data
Papers that mentioned: 4
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pypi: fuzzyjoin
Join two tables by a fuzzy comparison of text columns.
Papers that mentioned: 4
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cran: metamicrobiomeR
Microbiome Data Analysis & Meta-Analysis with GAMLSS-BEZI & Random Effects
Papers that mentioned: 4
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cran: UCSCXenaTools
Download and Explore Datasets from UCSC Xena Data Hubs
Papers that mentioned: 4
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pypi: Framework4
A graphical toolkit to build beamline applications
Papers that mentioned: 4
Very Likely Science (80)
pypi: bfast
A Python library for Breaks For Additive Season and Trend (BFAST) that resorts to parallel computing for accelerating the computations.
Papers that mentioned: 4
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cran: PCovR
Principal Covariates Regression
Papers that mentioned: 4
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cran: nls.multstart
Robust Non-Linear Regression using AIC Scores
Papers that mentioned: 4
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pypi: bench
Benchmark resources usage
Papers that mentioned: 4
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pypi: rex
Yet another static blog generator.
Papers that mentioned: 4
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pypi: fragments
tool for diff-based templating / fragmentation control
Papers that mentioned: 4
Very Likely Science (65)
cran: occ
Estimates PET Neuroreceptor Occupancies
Papers that mentioned: 4
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pypi: eGo
A cross-grid-level electricity grid and storage optimization tool
Papers that mentioned: 4
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pypi: BCO
Python Interface to the Max-Planck-Institute Barbados Cloud Observatory data.
Papers that mentioned: 4
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pypi: functional
Tools for functional programming in python
Papers that mentioned: 4
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pypi: Funct
Functional Python Sequence
Papers that mentioned: 4
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cran: ezcox
Easily Process a Batch of Cox Models
Papers that mentioned: 4
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cran: longpower
Sample Size Calculations for Longitudinal Data
Papers that mentioned: 4
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cran: OmicsPLS
Data Integration with Two-Way Orthogonal Partial Least Squares
Papers that mentioned: 4
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cran: openNLP
Apache OpenNLP Tools Interface
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cran: OCNet
Optimal Channel Networks
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pypi: svn
Intuitive Subversion wrapper.
Papers that mentioned: 4
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pypi: refget
Python client for refget
Papers that mentioned: 4
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pypi: bftools
A brainfuck toolbox for python.
Papers that mentioned: 4
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cran: TSVC
Tree-Structured Modelling of Varying Coefficients
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Very Likely Science (93)
pypi: pyinstaller
PyInstaller bundles a Python application and all its dependencies into a single package.
Papers that mentioned: 4
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pypi: rjson
easy way to get n number of json objects from a string automatically
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cran: valr
Genome Interval Arithmetic
Papers that mentioned: 4
Very Likely Science (100)
pypi: GazeParser
Gaze tracking, parsing and visualization tools
Papers that mentioned: 4
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bioconductor: fmcsR
Mismatch Tolerant Maximum Common Substructure Searching
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cran: koRpus
Text Analysis with Emphasis on POS Tagging, Readability, and Lexical Diversity
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pypi: GAWS
Google Amazon Wrapper Single sign on
Papers that mentioned: 4
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cran: rMR
Importing Data from Loligo Systems Software, Calculating Metabolic Rates and Critical Tensions
Papers that mentioned: 4
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pypi: gauge
Deterministic linear gauge library
Papers that mentioned: 4
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cran: USP
U-Statistic Permutation Tests of Independence for all Data Types
Papers that mentioned: 4
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cran: heemod
Markov Models for Health Economic Evaluations
Papers that mentioned: 4
Very Likely Science (100)
bioconductor: iASeq
iASeq: integrating multiple sequencing datasets for detecting allele-specific events
Papers that mentioned: 4
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cran: HGNChelper
Identify and Correct Invalid HGNC Human Gene Symbols and MGI Mouse Gene Symbols
Papers that mentioned: 4
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pypi: MetaNN
MetaNN provides extensions of PyTorch nn.Module for meta learning
Papers that mentioned: 4
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cran: mQTL
Metabolomic Quantitative Trait Locus Mapping
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pypi: pub
Python Utility Belt
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cran: mpath
Regularized Linear Models
Papers that mentioned: 4
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pypi: RIFT
RIFT parameter estimation pipeline. Note branch used is temp-RIT-Tides-port_python3_restructure_package (which will become master shortly)!
Papers that mentioned: 4
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pypi: eq
Earthquake science library.
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cran: irrCAC
Computing Chance-Corrected Agreement Coefficients (CAC)
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cran: ggmuller
Create Muller Plots of Evolutionary Dynamics
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pypi: Blend
A cross-platform tool for merging and processing client-side assets for a web application.
Papers that mentioned: 4
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cran: nbpMatching
Functions for Optimal Non-Bipartite Matching
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pypi: REPIC
Read Evaluate Print in Comments
Papers that mentioned: 4
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pypi: gadwall
A command line client to duckdb
Papers that mentioned: 4
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pypi: medusa
A framework for implementing asynchronous servers.
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cran: lle
Locally linear embedding
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pypi: ga
A lightweight genetic algorithm library written in pure Python
Papers that mentioned: 4
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pypi: ecopy
EcoPy: Ecological Data Analysis in Python
Papers that mentioned: 4
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cran: RJafroc
Artificial Intelligence Systems and Observer Performance
Papers that mentioned: 4
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bioconductor: pdInfoBuilder
Platform Design Information Package Builder
Papers that mentioned: 4
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pypi: ssbio
Tools to enable structural systems biology
Papers that mentioned: 4
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pypi: outfit
Tidy up your machine learning experiments
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cran: rex
Friendly Regular Expressions
Papers that mentioned: 4
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pypi: Binsanity
Method to cluster contigs based a biphasic method with coverage and composition
Papers that mentioned: 4
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bioconductor: RareVariantVis
A suite for analysis of rare genomic variants in whole genome sequencing data
Papers that mentioned: 4
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cran: RInSp
R Individual Specialization
Papers that mentioned: 4
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pypi: cisco
A very basic calculator
Papers that mentioned: 4
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cran: parallelMap
Unified Interface to Parallelization Back-Ends
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pypi: Binner
Calculate bin sizes for items. Easy!
Papers that mentioned: 4
Very Likely Science (65)