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Applications

Experiments

Papers

pypi: genipe
An automatic genome-wide imputation pipeline.
Papers that mentioned: 3
Very Likely Science (100)
pypi: ld
Linux Distribution - a Linux OS platform information API
Papers that mentioned: 3
Very Likely Science (100)
pypi: Conquer
Conquer runs commands
Papers that mentioned: 3
Very Likely Science (65)
pypi: nitime
Nitime: timeseries analysis for neuroscience data
Papers that mentioned: 3
Very Likely Science (90)
pypi: nix
namespace for packages relating to the nix package manager
Papers that mentioned: 3
Very Likely Science (65)
pypi: rob
Make python objects persistent with Redis.
Papers that mentioned: 3
Very Likely Science (65)
pypi: catnet
Context Aggregation Network
Papers that mentioned: 3
Very Likely Science (90)
pypi: rank
A simple program to find substrings
Papers that mentioned: 3
Very Likely Science (65)
pypi: seq2vec
A package to turn sequence of words into a fix-length representation vector
Papers that mentioned: 3
Very Likely Science (65)
pypi: qt
Papers that mentioned: 3
Unlikely Science (0)
pypi: gfa
Python tools for the geospatial analysis of a velocityfield, using Davis & Titus (2011) and Bevis & Brown (2014) papers.
Papers that mentioned: 3
Very Likely Science (87)
pypi: epic2
Ultraperformant ChIP-Seq broad peak/domain finder.
Papers that mentioned: 3
Very Likely Science (100)
pypi: rbf
Robot Framework test library for automation of Web, REST APIs, SOAP Services, zOS, FTP, DB, Desktop Applications
Papers that mentioned: 3
Very Likely Science (65)
pypi: measurement
Easily use and manipulate unit-aware measurements in Python.
Papers that mentioned: 3
Very Likely Science (80)
pypi: ginger
A very lightweight static site generator
Papers that mentioned: 3
Very Likely Science (65)
pypi: nimfa
A Python module for nonnegative matrix factorization
Papers that mentioned: 3
Very Likely Science (80)
bioconductor: mitch
Multi-Contrast Gene Set Enrichment Analysis
Papers that mentioned: 3
Very Likely Science (100)
pypi: geneview
Geneview: A python package for genomics data visualization.
Papers that mentioned: 3
Very Likely Science (100)
pypi: scif
a filesystem organization for scientific software and metadata
Papers that mentioned: 3
Very Likely Science (100)
pypi: geopy
Python Geocoding Toolbox
Papers that mentioned: 3
Very Likely Science (100)
pypi: kobo
A pile of python modules used by Red Hat release engineering to build their tools
Papers that mentioned: 3
Very Likely Science (65)
cran: tgp
Bayesian Treed Gaussian Process Models
Papers that mentioned: 3
Very Likely Science (93)
pypi: alignparse
Align sequences and then parse features.
Papers that mentioned: 3
Very Likely Science (100)
pypi: ka
Papers that mentioned: 3
Unlikely Science (0)
pypi: geosearch
GeoSearch searchs and extracts country and city mentions from text
Papers that mentioned: 3
Very Likely Science (85)
pypi: rho
Papers that mentioned: 3
Very Likely Science (65)
pypi: equate
"This is a package with tools for matching things. Dirty things like language, files in your file system, socks and whistles."
Papers that mentioned: 3
Very Likely Science (65)
cran: qtlcharts
Interactive Graphics for QTL Experiments
Papers that mentioned: 3
Very Likely Science (100)
pypi: fs2
A cmd tool based on pyfilesystem2 lib
Papers that mentioned: 3
Very Likely Science (65)
pypi: msgpack
MessagePack serializer
Papers that mentioned: 3
Very Likely Science (65)
bioconductor: VanillaICE
A Hidden Markov Model for high throughput genotyping arrays
Papers that mentioned: 3
Likely Science (58)
pypi: parse
parse() is the opposite of format()
Papers that mentioned: 3
Very Likely Science (65)
pypi: admin
Develop soon
Papers that mentioned: 3
Very Likely Science (65)
pypi: inferno
Inferno: a python map/reduce platform powered by disco.
Papers that mentioned: 3
Very Likely Science (65)
pypi: geodist
GeoDist Package
Papers that mentioned: 3
Very Likely Science (65)
pypi: ce
ce
Papers that mentioned: 3
Very Likely Science (65)
pypi: Nested
A simple printer of nested lines
Papers that mentioned: 3
Very Likely Science (65)
pypi: Klout
Minimalist Klout API interface.
Papers that mentioned: 3
Very Likely Science (65)
pypi: generic
Generic programming library for Python
Papers that mentioned: 3
Very Likely Science (65)
pypi: pyspark
Apache Spark Python API
Papers that mentioned: 3
Likely Science (55)
pypi: opener
Solve open the lock puzzle.
Papers that mentioned: 3
Very Likely Science (100)
pypi: neuroglancer
Python data backend for neuroglancer, a WebGL-based viewer for volumetric data
Papers that mentioned: 3
Very Likely Science (100)
pypi: JATA
A Digital Humanities Package
Papers that mentioned: 3
Very Likely Science (65)
cran: openCR
Open Population Capture-Recapture
Papers that mentioned: 3
Very Likely Science (100)
pypi: gotree
A new solution to tree
Papers that mentioned: 3
Very Likely Science (65)
cran: pergola
Toolbox for Polyploid Genetic Data
Papers that mentioned: 3
Very Likely Science (85)
cran: VarSelLCM
Variable Selection for Model-Based Clustering of Mixed-Type Data Set with Missing Values
Papers that mentioned: 3
Very Likely Science (75)
pypi: ruler
Humane grammar library
Papers that mentioned: 3
Very Likely Science (65)
cran: vcvComp
Comparison of Variance - Covariance Patterns
Papers that mentioned: 3
Very Likely Science (93)
cran: reportROC
An Easy Way to Report ROC Analysis
Papers that mentioned: 3
Very Likely Science (85)
cran: UsingR
Data Sets, Etc. for the Text "Using R for Introductory Statistics", Second Edition
Papers that mentioned: 3
Very Likely Science (93)
bioconductor: VennDetail
A package for visualization and extract details
Papers that mentioned: 3
Very Likely Science (100)
cran: polynom
Papers that mentioned: 3
Unlikely Science (0)
cran: evobiR
Comparative and Population Genetic Analyses
Papers that mentioned: 3
Very Likely Science (85)
pypi: Guru
packt example package
Papers that mentioned: 3
Very Likely Science (65)
pypi: glue
Glue is a simple command line tool to generate sprites.
Papers that mentioned: 3
Very Likely Science (65)
pypi: desktop
Simple desktop integration for Python
Papers that mentioned: 3
Very Likely Science (65)
cran: epitab
Flexible Contingency Tables for Epidemiology
Papers that mentioned: 3
Very Likely Science (100)
cran: actuar
Actuarial Functions and Heavy Tailed Distributions
Papers that mentioned: 3
Very Likely Science (100)
cran: prLogistic
Estimation of Prevalence Ratios using Logistic Models
Papers that mentioned: 3
Likely Science (50)
cran: evaluate
Parsing and Evaluation Tools that Provide More Details than the Default
Papers that mentioned: 3
Very Likely Science (77)
pypi: Allegra
Asynchronous Network Peer Programming
Papers that mentioned: 3
Very Likely Science (65)
bioconductor: DEsubs
DEsubs: an R package for flexible identification of differentially expressed subpathways using RNA-seq expression experiments
Papers that mentioned: 3
Very Likely Science (100)
cran: estimatr
Fast Estimators for Design-Based Inference
Papers that mentioned: 3
Very Likely Science (100)
pypi: DeFCoM
A supervised learning genomic footprinter
Papers that mentioned: 3
Very Likely Science (80)
bioconductor: chromstaR
Combinatorial and Differential Chromatin State Analysis for ChIP-Seq Data
Papers that mentioned: 3
Very Likely Science (93)
bioconductor: erccdashboard
Assess Differential Gene Expression Experiments with ERCC Controls
Papers that mentioned: 3
Very Likely Science (100)
cran: geodist
Fast, Dependency-Free Geodesic Distance Calculations
Papers that mentioned: 3
Very Likely Science (77)
cran: nsga2R
Elitist Non-Dominated Sorting Genetic Algorithm
Papers that mentioned: 3
Very Likely Science (93)
bioconductor: ExiMiR
R functions for the normalization of Exiqon miRNA array data
Papers that mentioned: 3
Very Likely Science (90)
pypi: dedup
dedup
Papers that mentioned: 3
Very Likely Science (65)
pypi: abies
Abies V1 Base Project
Papers that mentioned: 3
Very Likely Science (65)
pypi: ddg
DuckDuckGo zero-click api for your command-line
Papers that mentioned: 3
Very Likely Science (65)
cran: metaforest
Exploring Heterogeneity in Meta-Analysis using Random Forests
Papers that mentioned: 3
Very Likely Science (85)
pypi: Dent
Papers that mentioned: 3
Very Likely Science (65)
pypi: munge
data manipulation library and client
Papers that mentioned: 3
Very Likely Science (65)
pypi: counting
Counting
Papers that mentioned: 3
Very Likely Science (80)
cran: gimms
Download and Process GIMMS NDVI3g Data
Papers that mentioned: 3
Very Likely Science (100)
cran: LSTS
Locally Stationary Time Series
Papers that mentioned: 3
Very Likely Science (75)
pypi: msbwt
Allows for merging and querying of multi-string BWTs for genomic strings
Papers that mentioned: 3
Very Likely Science (85)
cran: explore
Simplifies Exploratory Data Analysis
Papers that mentioned: 3
Very Likely Science (89)
cran: melt
Multiple Empirical Likelihood Tests
Papers that mentioned: 3
Very Likely Science (75)
pypi: motifscan
A package for motif discovery and motif enrichment analysis
Papers that mentioned: 3
Very Likely Science (100)
pypi: Dcluster
A Python package for Clustering by fast search and find of density peaks
Papers that mentioned: 3
Very Likely Science (65)
cran: ggparty
'ggplot' Visualizations for the 'partykit' Package
Papers that mentioned: 3
Very Likely Science (93)
pypi: mtk
The Messaging ToolKit
Papers that mentioned: 3
Very Likely Science (60)
pypi: emsim
Electricity market simulation tool
Papers that mentioned: 3
Very Likely Science (75)
bioconductor: compartmap
Higher-order chromatin domain inference in single cells from scRNA-seq and scATAC-seq
Papers that mentioned: 3
Very Likely Science (89)
cran: MatchThem
Matching and Weighting Multiply Imputed Datasets
Papers that mentioned: 3
Very Likely Science (85)
pypi: emmer
A python toolkit for the cryo-EM developer
Papers that mentioned: 3
Very Likely Science (65)
pypi: Moz
UNKNOWN
Papers that mentioned: 3
Very Likely Science (65)
cran: GHS
Graphical Horseshoe MCMC Sampler Using Data Augmented Block Gibbs Sampler
Papers that mentioned: 3
Very Likely Science (83)
cran: gglasso
Group Lasso Penalized Learning Using a Unified BMD Algorithm
Papers that mentioned: 3
Very Likely Science (100)
cran: aster
Aster Models
Papers that mentioned: 3
Very Likely Science (83)
pypi: dbgap
dbGaP to bioCaddie conversion utility
Papers that mentioned: 3
Very Likely Science (60)
pypi: scikit-multilearn
Scikit-multilearn is a BSD-licensed library for multi-label classification that is built on top of the well-known scikit-learn ecosystem.
Papers that mentioned: 3
Very Likely Science (80)
cran: edgebundleR
Circle Plot with Bundled Edges
Papers that mentioned: 3
Very Likely Science (77)
pypi: ScientificPython
Various Python modules for scientific computing
Papers that mentioned: 3
Very Likely Science (75)
pypi: iox
a package for IO connections
Papers that mentioned: 3
Very Likely Science (65)
bioconductor: HDF5Array
HDF5 backend for DelayedArray objects
Papers that mentioned: 3
Very Likely Science (90)