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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Projects: pypi: scArches

https://packages.ecosyste.ms/registries/pypi.org/packages/scArches

Transfer learning with Architecture Surgery on Single-cell data
25 versions
Latest release: about 2 years ago
2 dependent packages
1,259 downloads last month

Enhanced Analysis
Repository Activity:
Repository Owner: Theis Lab (organization)
Institute of Computational Biology Academic
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +20 Academic repository owner
    Repository owned by academic institution
  • +15 Institutional repository owner
    Repository owned by research institution
  • +4 Science terms in README
    2 scientific terms found in README
  • +6 Academic links
    1 academic links found in README
Penalties:
  • -10 PyPI ecosystem
    General-purpose ecosystem
  • -10 No science terms in description
    No scientific terms found in description
Very Likely Science (100)

Papers Mentioning scArches 3

10.1016/j.cell.2021.04.048
Integrated analysis of multimodal single-cell data
Cited by: 4,423
Author(s): Yuhan Hao, Stephanie Hao, Erica Andersen‐Nissen, William M. Mauck, Shiwei Zheng, Andrew Butler, Madeline Lee, Aaron J. Wilk, Charlotte A. Darby, Michael Zager, Paul Hoffman, Marlon Stoeckius, Efthymia Papalexi, Eleni P. Mimitou, Jaison Jain, Avi Srivastava, T.A. Stuart, Lamar M. Fleming, Bertrand Z. Yeung, Angela J. Rogers, Juliana McElrath, Catherine A. Blish, Raphaël Gottardo, Peter Smibert, Rahul Satija
Software Mentions: 13
Published: about 4 years ago
10.1186/s13059-020-02238-2
scMC learns biological variation through the alignment of multiple single-cell genomics datasets
Cited by: 418
Author(s): Lihua Zhang, Qing Nie
Software Mentions: 4
Published: over 4 years ago
10.1126/scitranslmed.abe4282
Lung transplantation for patients with severe COVID-19
Cited by: 231
Author(s): Ankit Bharat, Melissa Querrey, Nikolay S. Markov, Samuel S. Kim, Chitaru Kurihara, Rafael Garza-Castillon, Adwaiy Manerikar, Ali Shilatifard, Rade Tomic, Yuliya Politanska, Hiam Abdala‐Valencia, Anjana V. Yeldandi, Jon W. Lomasney, Alexander V. Misharin, G. R. Scott Budinger
Software Mentions: 2
Published: over 4 years ago