pypi projects 9,932
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pypi: NanoCount
NanoCount estimates transcripts abundance from Oxford Nanopore *direct-RNA sequencing* datasets, using an expectation-maximization approach like RSEM, Kallisto, salmon, etc to handle the uncertainty of multi-mapping readsPapers that mentioned: 2
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pypi: FORD
FORD (FORtran Documenter) is an automatic documentation generator for modern Fortran programs.Papers that mentioned: 2
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pypi: Jackhammer
Papers that mentioned: 2
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pypi: i-PI
A Python interface for ab initio path integral molecular dynamics simulationsPapers that mentioned: 2
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pypi: Metage2Metabo
Automatic reconstruction of draft metabolic networks with Pathway Tools and graph-based metabolic analysisPapers that mentioned: 2
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pypi: NanoSim-H
NanoSim-H: a simulator of Oxford Nanopore reads; a fork of NanoSim.Papers that mentioned: 2
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pypi: hic2cool
Converter between hic files (from juicer) and single-resolution or multi-resolution cool files (for cooler). Both hic and cool files describe Hi-C contact matrices. Intended to be lightweight, this can be used as an imported package or a stand-alone Python tool for command line conversion.Papers that mentioned: 2
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pypi: elm
Python Extreme Learning Machine (ELM) is a machine learning technique used for classification/regression tasks.Papers that mentioned: 2
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pypi: pet
This program or lib can download torrent file throughemail account and send the torrent file to transmission web controllerPapers that mentioned: 2
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pypi: std
Papers that mentioned: 2
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pypi: Lapse
Papers that mentioned: 2
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pypi: Preferences
It a simple class that creates a list of dictionarries to store preferences as key value pairs. You can use the class directly or load the preferences from files. The main reason I wrote it was to create an easy way of storing more than one preference with the same name and load them form files in a manner that allows for easy appending or replacing of parmeters that could have been loaded from a default prameter file. There are also several methods to make managing the preferences easier.Papers that mentioned: 2
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pypi: PyDDE
PyDDE is a solver for delay differential equations written in Python and C.Papers that mentioned: 2
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pypi: MLML
offers support for a variety of algorithms on memory-limited infrastructurePapers that mentioned: 2
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pypi: MediBloc
Papers that mentioned: 2
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pypi: fmi
A simple Python interface to Find My iPhone on the Mobile Me servicePapers that mentioned: 2
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pypi: inflate
inflate lets you compute how much money is worth in different yearsPapers that mentioned: 2
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pypi: Sinbad
A library for uniform, easy access to online data sources in standard formatsPapers that mentioned: 2
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pypi: tesseract
Tesselation based Recovery of Amorphous halo ConcentrationsPapers that mentioned: 2
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pypi: clusteval
clusteval is a python package for unsupervised cluster validation.Papers that mentioned: 2
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pypi: visbrain
Hardware-accelerated visualization suite for brain-data in PythonPapers that mentioned: 2
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pypi: faster-rcnn
Papers that mentioned: 2
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pypi: roundup
A simple-to-use and -install issue-tracking system with command-line, web and e-mail interfaces. Highly customisable.Papers that mentioned: 2
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pypi: pandora
Pandora is a stereo matching framework that helps emulate state of the art algorithmsPapers that mentioned: 2
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pypi: ffprobe
Wrapper around ffprobe command to extract metadata from media filesPapers that mentioned: 2
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pypi: hugin
HuginEO - Machine Learning for Earth Observation experimentation toolPapers that mentioned: 2
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pypi: RUP
Papers that mentioned: 2
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