Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: umitools

https://packages.ecosyste.ms/registries/pypi.org/packages/umitools

A toolset for handling sequencing data with unique molecular identifiers (UMIs)
3 versions
Latest release: over 6 years ago
26 downloads last month

Papers Mentioning umitools 3

10.7554/eLife.55474
An atlas of cell types in the mouse epididymis and vas deferens
Cited by: 45
Author(s): Vera D. Rinaldi, Elisa Donnard, Kyle Gellatly, Morten Rasmussen, Alper Küçükural, Onur Yukselen, Manuel Garber, Upasna Sharma, Oliver J. Rando
Software Mentions: 5
Published: over 4 years ago
10.1186/s12864-018-4933-1
Elimination of PCR duplicates in RNA-seq and small RNA-seq using unique molecular identifiers
Cited by: 115
Author(s): Yu Fu, Pei-Hsuan Wu, Timothy J. Beane, Phillip D. Zamore, Zhiping Weng
Software Mentions: 1
Published: over 6 years ago
10.1038/s41421-021-00265-2
CPA-seq reveals small ncRNAs with methylated nucleosides and diverse termini
Cited by: 25
Author(s): Heming Wang, Rong Huang, Ling Li, Junjin Zhu, Zhihong Li, Chao Peng, Xuran Zhuang, Haifan Lin, Shuo Shi, Pengyu Huang
Software Mentions: 1
Published: over 3 years ago