Projects: pypi: umitools
https://packages.ecosyste.ms/registries/pypi.org/packages/umitools
A toolset for handling sequencing data with unique molecular identifiers (UMIs)
3 versions
Latest release: about 8 years ago
26 downloads last month
Enhanced Analysis
Repository Activity:
Repository Owner:
Weng Lab (organization)
Zhiping Weng's lab at UMASS Medical School Academic
Zhiping Weng's lab at UMASS Medical School Academic
Science Score: 100/100
Starting Score: 100 points
Bonuses:
-
+20
Academic repository owner
Repository owned by academic institution -
+15
Institutional repository owner
Repository owned by research institution -
+10
Educational website
Repository owner has educational domain website
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem -
-25
Non-science indicators
1 non-scientific terms found
Very Likely Science (100)
Papers Mentioning umitools 3
10.7554/eLife.55474
An atlas of cell types in the mouse epididymis and vas deferensCited by: 45
Author(s): Vera D. Rinaldi, Elisa Donnard, Kyle Gellatly, Morten Rasmussen, Alper Küçükural, Onur Yukselen, Manuel Garber, Upasna Sharma, Oliver J. Rando
Software Mentions: 5
Published: almost 6 years ago
10.1186/s12864-018-4933-1
Elimination of PCR duplicates in RNA-seq and small RNA-seq using unique molecular identifiersCited by: 115
Author(s): Yu Fu, Pei-Hsuan Wu, Timothy J. Beane, Phillip D. Zamore, Zhiping Weng
Software Mentions: 1
Published: almost 8 years ago
10.1038/s41421-021-00265-2
CPA-seq reveals small ncRNAs with methylated nucleosides and diverse terminiCited by: 25
Author(s): Heming Wang, Rong Huang, Ling Li, Junjin Zhu, Zhihong Li, Chao Peng, Xuran Zhuang, Haifan Lin, Shuo Shi, Pengyu Huang
Software Mentions: 1
Published: about 5 years ago