10.1371/journal.pone.0084070

Small RNA Analysis in Sindbis Virus Infected Human HEK293 Cells
Cited by: 11
Author(s): Andras Donaszi-Ivanov, Irina Mohorianu, Tamás Dalmay, Penny P. Powell
Software Mentions: 2
Published: almost 13 years ago

10.1038/s41598-019-56981-z

Architecture of The Human Ape1 Interactome Defines Novel Cancers Signatures
Cited by: 16
Author(s): Dilara Ayyildiz, Giulia Antoniali, Chiara D’Ambrosio, Giovanna Mangiapane, Emiliano Dalla, Andrea Scaloni, Gianluca Tell, Silvano Piazza
Software Mentions: 2
Published: almost 7 years ago

10.1186/s12885-020-07023-9

Albumin-to-alkaline phosphatase ratio serves as a prognostic indicator in unresectable pancreatic ductal adenocarcinoma: a propensity score matching analysis
Cited by: 8
Author(s): Ke Zhang, Shu Dong, Yan Hua Jing, Hui Gao, Lian‐Yu Chen, Yanqing Hua, Hao Chen, Zhen Chen
Software Mentions: 2
Published: over 6 years ago

10.7717/peerj.11337

Histopathological analysis of zebrafish after introduction of non-biodegradable polyelectrolyte microcapsules into the circulatory system
Cited by: 6
Author(s): Ekaterina Borvinskaya, Anton Gurkov, Ekaterina Shchapova, Andrei Mutin, Maxim A. Timofeyev
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-020-58886-8

Precipitous Declines in Northern Gulf of Mexico Invasive Lionfish Populations Following the Emergence of an Ulcerative Skin Disease
Cited by: 21
Author(s): Holden E. Harris, Alexander Q. Fogg, Micheal S. Allen, Robert Ahrens, William F. Patterson
Software Mentions: 2
Published: almost 7 years ago

10.3390/ani10030512

Determination of Risk Factors Associated with Foot and Mouth Disease Outbreaks in Dairy Farms in Chiang Mai Province, Northern Thailand
Cited by: 9
Author(s): Chalutwan Sansamur, Orapun Arjkumpa, Arisara Charoenpanyanet, Veerasak Punyapornwithaya
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0039083

Soil Moisture and Fungi Affect Seed Survival in California Grassland Annual Plants
Cited by: 50
Author(s): Erin A. Mordecai
Software Mentions: 2
Published: over 14 years ago

10.3389/fcimb.2017.00488

Urinary Microbiome and Psychological Factors in Women with Overactive Bladder
Cited by: 62
Author(s): Peng Wu, Chen Yang, Jie Zhao, Guihao Zhang, Jiawei Chen, Junpeng Wang, Huijian Zhang
Software Mentions: 2
Published: almost 9 years ago

10.1038/s41598-020-59619-7

Complex System Analysis of Korean Peninsula Earthquake Data
Cited by: 1
Author(s): Sangwon Chae, Seunghyun Jang, Sangmok Lee, Dong-Hyun Lee
Software Mentions: 2
Published: over 6 years ago

10.1007/s11682-020-00355-x

Interactive mapping of language and memory with the GE2REC protocol
Cited by: 2
Author(s): Sonja Banjac, Elise Roger, Émilie Cousin, Marcela Perrone‐Bertolotti, Célise Haldin, Cédric Pichat, Laurent Lamalle, Lorella Minotti, Philippe Kahane, Monica Baciu
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-020-59759-w

Denitrification rates in lake sediments of mountains affected by high atmospheric nitrogen deposition
Cited by: 13
Author(s): Carlos Palacin‐Lizarbe, Lluís Camarero, Sara Hallin, Christopher M. Jones, Jordi Catalan
Software Mentions: 2
Published: over 6 years ago

10.3390/genes8100278

A DNA Structural Alphabet Distinguishes Structural Features of DNA Bound to Regulatory Proteins and in the Nucleosome Core Particle
Cited by: 8
Author(s): Bohdan Schneider, Paulína Božíková, Petr Čech, Daniel Svozil, Jiří Černý
Software Mentions: 2
Published: about 9 years ago

10.1038/s41416-019-0538-y

EZH2 cooperates with E2F1 to stimulate expression of genes involved in adrenocortical carcinoma aggressiveness
Cited by: 20
Author(s): Houda Tabbal, Amandine Septier, M Mathieu, Coralie Drelon, Stéphanie Rodriguez, Cyril Djari, Marie Batisse-Lignier, Igor Tauveron, Jean-Christophe Pointud, Isabelle Sahut‐Barnola, Bruno Ragazzon, Guillaume Assié, Jérôme Bertherat, Anne‐Marie Lefrançois‐Martinez, Antoine Martinez, Pierre Val
Software Mentions: 2
Published: over 7 years ago

10.1007/s00394-019-02035-z

Synergistic and antagonistic interactions between antibiotics and synbiotics in modifying the murine fecal microbiome
Cited by: 8
Author(s): Angela Jačan, Karl Kashofer, Geraldine Zenz, Esther E. Fröhlich, Florian Reichmann, Ahmed M. Hassan, Peter Holzer
Software Mentions: 2
Published: over 7 years ago

10.3390/ijms21010155

Autophagy Deficiency in Renal Proximal Tubular Cells Leads to an Increase in Cellular Injury and Apoptosis under Normal Fed Conditions
Cited by: 20
Author(s): Chigure Suzuki, Isei Tanida, Juan Alejandro Oliva Trejo, Soichiro Kakuta, Yasuo Uchiyama
Software Mentions: 2
Published: almost 7 years ago

10.7554/eLife.58468

The role of cochlear place coding in the perception of frequency modulation
Cited by: 20
Author(s): Kelly L. Whiteford, Heather A. Kreft, Andrew J. Oxenham
Software Mentions: 2
Published: about 6 years ago

10.1186/s40529-017-0180-z

The effects of local variation in light availability on pollinator visitation, pollen and resource limitation of female reproduction in Hosta ventricosa
Cited by: 9
Author(s): Guo‐Xing Cao, Bi-Xian Wu, Xu-Jian Xu, Wenjie Xie, Chunping Yang
Software Mentions: 2
Published: over 9 years ago

10.3390/genes10100746

Increased Expression of Lipid Metabolism Genes in Early Stages of Wooden Breast Links Myopathy of Broilers to Metabolic Syndrome in Humans
Cited by: 32
Author(s): Juniper A. Lake, Michael B. Papah, Behnam Abasht
Software Mentions: 2
Published: about 7 years ago

10.1186/s13068-016-0532-z

Lignocellulose-derived thin stillage composition and efficient biological treatment with a high-rate hybrid anaerobic bioreactor system
Cited by: 19
Author(s): Margreet J. Oosterkamp, Celia Méndez–García, Chang H. Kim, Štefan Bauer, Ana B. Ibáñez, Sabrina Zimmerman, Pei‐Ying Hong, Isaac Cann, Roderick I. Mackie
Software Mentions: 2
Published: over 10 years ago

10.1186/s13068-019-1422-y

Deletion of either the regulatory gene ara1 or metabolic gene xki1 in Trichoderma reesei leads to increased CAZyme gene expression on crude plant biomass
Cited by: 9
Author(s): Tiziano Benocci, María Victoria Aguilar Pontes, Roland S. Kun, Ronnie J.M. Lubbers, Kathleen Lail, Mei Wang, Anna Lipzen, Vivian Ng, Igor V. Grigoriev, Bernhard Schink, Paul Daly, Ronald P. de Vries
Software Mentions: 2
Published: over 7 years ago

10.3390/ani10050776

The Reported Use of Nosebands in Racing and Equestrian Pursuits
Cited by: 14
Author(s): Dominic Weller, Samantha Franklin, Glenn M. Shea, Peter White, Kate Fenner, Bethany Wilson, Cristina Wilkins, Paul McGreevy
Software Mentions: 2
Published: over 6 years ago

10.3389/fphys.2020.573505

Skeletal Muscle Immunometabolism in Women With Polycystic Ovary Syndrome: A Meta-Analysis
Cited by: 8
Author(s): Maria Manti, Elisabet Stener‐Victorin, Anna Benrick
Software Mentions: 2
Published: about 6 years ago

10.3390/bios10050050

Fecal Volatile Organic Compound Profiles are Not Influenced by Gestational Age and Mode of Delivery: A Longitudinal Multicenter Cohort Study
Cited by: 7
Author(s): Nancy Deianova, Sofia el Manouni el Hassani, Hendrik J. Niemarkt, Veerle Cossey, Anton H. van Kaam, Floor Jenken, Mirjam M. van Weissenbruch, Esmee M Doedes, Kyra Baelde, Renée X. de Menezes, Marc A. Benninga, Wouter J. de Jonge, Nanne K de Boer, Tim G. de Meij
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-020-63543-1

Bacterial community analysis of floor dust and HEPA filters in air purifiers used in office rooms in ILAS, Beijing
Cited by: 21
Author(s): Jianguo Guo, Yi Xiong, Taisheng Kang, Zhiguang Xiang, Chuan Qin
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-020-63475-w

Gut metagenomic and short chain fatty acids signature in hypertension: a cross-sectional study
Cited by: 101
Author(s): Lorena Calderón-Pérez, María José Gosalbes, Sílvia Yuste, Rosa M. Valls, Anna Pedret, Elisabet Llauradó, Nuria Jiménez‐Hernández, Alejandro Artacho, Laura Pla‐Pagà, Judit Companys, Iziar A. Ludwig, Marı́a-Paz Romero, Laura Rubió, Rosa Solá
Software Mentions: 2
Published: over 6 years ago

10.3390/biom9090390

Dose-Dependent Alterations to In Vitro Human Microbiota Composition and Butyrate Inhibition by a Supercritical Carbon Dioxide Hops Extract
Cited by: 10
Author(s): Paul Blatchford, Shanthi G. Parkar, Wendy Hopkins, John R. Ingram, Kevin H. Sutton
Software Mentions: 2
Published: about 7 years ago

10.3390/ani11030870

Comparison of Genetic Merit for Weight and Meat Traits between the Polled and Horned Cattle in Multiple Beef Breeds
Cited by: 5
Author(s): Imtiaz A. S. Randhawa, Michael McGowan, Laércio R. Porto-Neto, Ben J. Hayes, Russell E. Lyons
Software Mentions: 2
Published: over 5 years ago

10.3390/genes11050534

Investigating Human Mitochondrial Genomes in Single Cells
Cited by: 8
Author(s): Maria Angela Diroma, Angelo Sante Varvara, Marcella Attimonelli, Graziano Pesole, Ernesto Picardi
Software Mentions: 2
Published: over 6 years ago

10.3390/biom11040588

Assessing Various Control Samples for Microarray Gene Expression Profiling of Laryngeal Squamous Cell Carcinoma
Cited by: 2
Author(s): Adam Ustaszewski, Magdalena Kostrzewska-Poczekaj, Joanna Janiszewska, Małgorzata Jarmuż-Szymczak, Małgorzata Wierzbicka, Joanna Marszał, Reidar Grénman, Maciej Giefing
Software Mentions: 2
Published: over 5 years ago

10.3390/genes11070743

Genetic Reconstruction and Forensic Analysis of Chinese Shandong and Yunnan Han Populations by Co-Analyzing Y Chromosomal STRs and SNPs
Cited by: 16
Author(s): Caiyong Yin, Kaiyuan Su, Ziwei He, Dian Zhai, Kai Guo, Xueyun Chen, Li Jin, Shilin Li
Software Mentions: 2
Published: over 6 years ago

10.3390/nu11091967

Neonatal Consumption of Oligosaccharides Greatly Increases L-Cell Density without Significant Consequence for Adult Eating Behavior
Cited by: 11
Author(s): Gwenola Le Dréan, Anne-Lise Pocheron, Hélène Billard, Isabelle Grit, Anthony Pagniez, Patricia Parnet, Eric Chappuis, Malvyne Rolli‐Derkinderen, Catherine Michel
Software Mentions: 2
Published: about 7 years ago

10.3390/biomedicines9070705

Multiplex Patient-Based Drug Response Assay in Pancreatic Ductal Adenocarcinoma
Cited by: 8
Author(s): Andrew Armstrong, Muhammad R. Haque, Sina Mirbagheri, Usman Barlass, Douglas Gilbert, Jaimin Amin, Ajaypal Singh, Ankur Naqib, Faraz Bishehsari
Software Mentions: 2
Published: over 5 years ago

10.3390/genes11111241

Existence of Bov-B LINE Retrotransposons in Snake Lineages Reveals Recent Multiple Horizontal Gene Transfers with Copy Number Variation
Cited by: 3
Author(s): Weerada Puinongpo, Worapong Singchat, Supaporn Petpradub, Ekaphan Kraichak, Mitsuo Nunome, Nararat Laopichienpong, Ratchaphol Thongchum, Thanphong Intarasorn, Siwapech Sillapaprayoon, Chantra Indananda, Narongrit Muangmai, Sunutcha Suntrarachun, Sudarath Baicharoen, Lawan Chanhome, Surin Peyachoknagul, Kornsorn Srikulnath
Software Mentions: 2
Published: about 6 years ago

10.1155/2017/2432536

Effect of Airborne Particle Abrasion on Microtensile Bond Strength of Total-Etch Adhesives to Human Dentin
Cited by: 8
Author(s): Maurizio D’Amario, Chiara Piccioni, Stefano Di Carlo, Francesca De Angelis, Silvia Caruso, Mario Capogreco
Software Mentions: 2
Published: almost 10 years ago

10.3390/genes12030331

Analysis of Human Gut Microbiome: Taxonomy and Metabolic Functions in Thai Adults
Cited by: 10
Author(s): Nachon Raethong, Massalin Nakphaichit, Narissara Suratannon, Witida Sathitkowitchai, Wanlapa Weerapakorn, Suttipun Keawsompong, Wanwipa Vongsangnak
Software Mentions: 2
Published: over 5 years ago

10.1155/2018/2014764

Permethrin Susceptibility for the Vector Culex tarsalis and a Nuisance Mosquito Aedes vexans in an Area Endemic for West Nile Virus
Cited by: 2
Author(s): Geoffrey P. Vincent, Justin K. Davis, Michael C. Wimberly, Christopher Carlson, Michael B. Hildreth
Software Mentions: 2
Published: over 8 years ago

10.3390/genes12040602

Responses to Mineral Supplementation and Salmon Lice (Lepeophtheirus salmonis) Infestation in Skin Layers of Atlantic Salmon (Salmo salar L.)
Cited by: 4
Author(s): Lene Sveen, Aleksei Krasnov, Gerrit Timmerhaus, André Sture Bogevik
Software Mentions: 2
Published: over 5 years ago

10.1016/j.isci.2021.102484

Integrating protein networks and machine learning for disease stratification in the Hereditary Spastic Paraplegias
Cited by: 6
Author(s): Nikoleta Vavouraki, James E. Tomkins, Eleanna Kara, Henry Houlden, John Hardy, Marcus J. Tindall, Patrick A. Lewis, Claudia Manzoni
Software Mentions: 2
Published: over 5 years ago

10.7717/peerj.6954

The use of bat houses as day roosts in macadamia orchards, South Africa
Cited by: 4
Author(s): Sina M. Weier, Valerie M.G. Linden, Ingo Graß, Teja Tscharntke, Peter J. Taylor
Software Mentions: 2
Published: over 7 years ago

10.1186/s12938-020-00833-9

Can computed tomography-based radiomics potentially discriminate between anterior mediastinal cysts and type B1 and B2 thymomas?
Cited by: 7
Author(s): Lulu Liu, Lu Fj, Peipei Pang, Guoliang Shao
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-020-69134-4

Optical mapping of the 22q11.2DS region reveals complex repeat structures and preferred locations for non-allelic homologous recombination (NAHR)
Cited by: 18
Author(s): Steven Pastor, Oanh Tran, Andrea Jin, Danielle Carrado, Benjamin A. Silva, Lahari Uppuluri, Heba Z. Abid, Eleanor Young, T. Blaine Crowley, Alice Bailey, Daniel McGinn, Donna M. McDonald‐McGinn, Elaine H. Zackai, Michael Xie, Deanne Taylor, Bernice E. Morrow, Ming Xiao, Beverly S. Emanuel
Software Mentions: 2
Published: over 6 years ago

10.3390/biology10090822

Profile of Bacterial Infections in COVID-19 Patients: Antimicrobial Resistance in the Time of SARS-CoV-2
Cited by: 9
Author(s): Irene Stefanini, Giuseppe De Renzi, Elisa Foddai, Elisa Cordani, Barbara Mognetti
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-020-69931-x

Nitrate as a potential prebiotic for the oral microbiome
Cited by: 60
Author(s): Bob T. Rosier, Elena Buetas, Eva M. Moya-Gonzálvez, Alejandro Artacho, Álex Mira
Software Mentions: 2
Published: over 6 years ago

10.7717/peerj.6460

Considerations for studying transmission of antimicrobial resistant enteric bacteria between wild birds and the environment on intensive dairy and beef cattle operations
Cited by: 5
Author(s): Kristin Tormoehlen, Yvette J. Johnson-Walker, Emily W. Lankau, Maung San Myint, John A. Herrmann
Software Mentions: 2
Published: over 7 years ago

10.3390/bioengineering8050059

SeqFu: A Suite of Utilities for the Robust and Reproducible Manipulation of Sequence Files
Cited by: 26
Author(s): Andrea Telatin, Piero Fariselli, Giovanni Birolo
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0118591

A Protocol to Assess Insect Resistance to Heat Waves, Applied to Bumblebees (Bombus Latreille, 1802)
Cited by: 52
Author(s): Baptiste Martinet, Thomas Lecocq, Jérémy Smet, Pierre Rasmont
Software Mentions: 2
Published: over 11 years ago

10.3897/BDJ.3.e4981

Inventory of the Heteroptera (Insecta: Hemiptera) in Komaba Campus of the University of Tokyo, a highly urbanized area in Japan
Cited by: 5
Author(s): Tadashi Ishikawa, Masaichi Saito, Keiko Kishimoto‐Yamada, Tadahiro Kato, Osamu Kurashima, Motomi Itô
Software Mentions: 2
Published: over 11 years ago

10.7717/peerj.3651

Use of multivariate control charts to assess the status of reef fish assemblages in the Northwestern Hawaiian Islands
Cited by: 3
Author(s): Atsuko Fukunaga, Randall K. Kosaki
Software Mentions: 2
Published: over 9 years ago

10.3897/BDJ.4.e10059

Dung beetle (Coleoptera: Scarabaeoidea) assemblages in the western Italian Alps: benchmark data for land use monitoring
Cited by: 2
Author(s): Claudia Tocco, Martin H. Villet
Software Mentions: 2
Published: almost 10 years ago

10.3897/BDJ.5.e20732

The communities of terrestrial macrofungi in different forest types in vicinities of Khanty-Mansiysk (middle taiga zone of West Siberia)
Cited by: 4
Author(s): Nina Filippova, Tatiana Bulyonkova
Software Mentions: 2
Published: almost 9 years ago

10.7717/peerj.3594

The effect of captivity on the skin microbial symbionts in three Atelopus species from the lowlands of Colombia and Ecuador
Cited by: 14
Author(s): Sandra V. Flechas, Ailín Blasco-Zúñiga, Andrés Merino‐Viteri, Valeria Ramírez‐Castañeda, Miryan Rivera, Adolfo Amézquita
Software Mentions: 2
Published: over 9 years ago

10.1038/s41598-020-70319-0

C. elegans episodic swimming is driven by multifractal kinetics
Cited by: 3
Author(s): Yusaku Ikeda, Peter Jurica, Hiroshi Kimura, Hiroaki Takagi, Zbigniew R. Struzik, Ken Kiyono, Yukinobu Arata, Yasushi Sako
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-020-71822-0

Effects of time and temperature during melanging on the volatile profile of dark chocolate
Cited by: 4
Author(s): Caitlin Clark, Harmonie M. Bettenhausen, Adam L. Heuberger, Jeffrey P. Miller, Linxing Yao, Margaret E. Stone
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-020-72138-9

Horizontal ‘gene drives’ harness indigenous bacteria for bioremediation
Cited by: 33
Author(s): Katherine E. French, Zhongrui Zhou, Norman Terry
Software Mentions: 2
Published: about 6 years ago

10.1186/s12711-018-0381-2

Genome-wide scan reveals population stratification and footprints of recent selection in Nelore cattle
Cited by: 20
Author(s): Diércles Francisco Cardoso, Lúcia Galvão de Albuquerque, Christian Reimer, Saber Qanbari, Malena Erbe, André Vieira do Nascimento, G. C. Venturini, Daiane Cristina Becker Scalez, Fernando Baldi, Gregório Miguel Ferreira de Camargo, Maria Eugênia Zerlotti Mercadante, Joslaine N. do Santos Gonçalves Cyrillo, Henner Simianer, Humberto Tonhati
Software Mentions: 2
Published: over 8 years ago

10.1186/1741-7007-7-1

Microarray and cDNA sequence analysis of transcription during nerve-dependent limb regeneration
Cited by: 147
Author(s): James R. Monaghan, Leonard G. Epp, Srikrishna Putta, Robert B. Page, John Walker, Chris K Beachy, Wei Zhu, Gerald M. Pao, Inder M. Verma, Tony Hunter, Susan V. Bryant, David M. Gardiner, Tim Harkins, S. Randal Voss
Software Mentions: 2
Published: almost 18 years ago

10.1186/s12917-018-1485-1

Bat rabies surveillance and risk factors for rabies spillover in an urban area of Southern Brazil
Cited by: 11
Author(s): Juliano Ribeiro, Claudia Staudacher, Camila Marinelli Martins, Leila Sabrina Ullmann, Fernando Ferreira, João Pessoa Araújo, Alexander Welker Biondo
Software Mentions: 2
Published: over 8 years ago

10.3389/fcimb.2019.00349

Sustained Egr-1 Response via p38 MAP Kinase Signaling Modulates Early Immune Responses of Dendritic Cells Parasitized by Toxoplasma gondii
Cited by: 18
Author(s): Arne L. ten Hoeve, Mohamed‐Ali Hakimi, Antonio Barragán
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0219592

Elimination of protein aggregates prevents premature senescence in human trisomy 21 fibroblasts
Cited by: 15
Author(s): Nobutoshi Nawa, Katsuya Hirata, Keiji Kawatani, Toshihiko Nambara, Sayaka Omori, Kimihiko Banno, Chikara Kokubu, Junji Takeda, Ken Nishimura, Manami Ohtaka, Mahito Nakanishi, Daisuke Okuzaki, Hidetoshi Taniguchi, Hitomi Arahori, Kazuko Wada, Yasuji Kitabatake, Keiichi Ozono
Software Mentions: 2
Published: over 7 years ago

10.1186/gb-2009-10-7-r81

Zebrafish reward mutants reveal novel transcripts mediating the behavioral effects of amphetamine
Cited by: 71
Author(s): Katharine J Webb, William Norton, Dietrich Trümbach, Annemarie H. Meijer, Jovica Ninkovic, Stefanie Topp, Daniel W. Heck, Carsten Marr, Wolfgang Wurst, Fabian J. Theis, Herman P. Spaink, Laure Bally‐Cuif
Software Mentions: 2
Published: almost 18 years ago

10.1186/s12918-018-0639-x

Co-expression of long non-coding RNAs and autism risk genes in the developing human brain
Cited by: 24
Author(s): Steven Cogill, Anand Srivastava, Mary Qu Yang, Liangjiang Wang
Software Mentions: 2
Published: almost 8 years ago

10.1186/gb-2011-12-5-r42

Modulated contact frequencies at gene-rich loci support a statistical helix model for mammalian chromatin organization
Cited by: 23
Author(s): Franck Court, Julie Miro, Caroline Braem, Marie-Noëlle Lelay-Taha, Audrey Brisebarre, Florian Atger, Thierry Gostan, Michaël Weber, Guy Cathala, Thierry Forné
Software Mentions: 2
Published: almost 16 years ago

10.1186/s13104-019-4097-3

Multivariate analysis of genomic variables, effective population size, and mutation rate
Cited by: 1
Author(s): Punit Bhattachan, Bo Dong
Software Mentions: 2
Published: almost 8 years ago

10.1186/gb-2012-13-6-r42

Composition of the adult digestive tract bacterial microbiome based on seven mouth surfaces, tonsils, throat and stool samples
Cited by: 754
Author(s): Nicholas Segata, Susan Kinder Haake, Peter J. Mannon, Katherine P. Lemon, Levi Waldron, Dirk Gevers, Curtis Huttenhower, Jacques Izard
Software Mentions: 2
Published: almost 15 years ago

10.1371/journal.pone.0242763

A multicenter, randomized, open-label, controlled trial to evaluate the efficacy and tolerability of hydroxychloroquine and a retrospective study in adult patients with mild to moderate coronavirus disease 2019 (COVID-19)
Cited by: 50
Author(s): Cheng-Pin Chen, Yi‐Chun Lin, Tsung-Chia Chen, Ting-Yu Tseng, Hon-Lai Wong, Chi‐Tai Kuo, Wu-Pu Lin, Sz-Rung Huang, Weiyao Wang, Jia-Hung Liao, Chia-Hung Liao, Yuan‐Pin Hung, Tse-Hung Lin, Tz-Yan Chang, Chin‐Fu Hsiao, Yi-Wen Huang, Wei‐Sheng Chung, Chien-Yu Cheng, Shu‐Hsing Cheng
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0237779

Predictive analysis methods for human microbiome data with application to Parkinson’s disease
Cited by: 18
Author(s): Mei Dong, Longhai Li, Man Chen, Anthony Kusalik, Wei Xu
Software Mentions: 2
Published: about 6 years ago

10.7717/peerj.8160

Rediscovery of <i>Osteocephalus vilarsi</i> (Anura: Hylidae): an overlooked but widespread Amazonian spiny-backed treefrog
Cited by: 9
Author(s): Miquéias Ferrão, Jiří Moravec, Leandro João Carneiro de Lima Moraes, Vinícius T. de Carvalho, Marcelo Gordo, Albertina P. Lima
Software Mentions: 2
Published: almost 7 years ago

10.3390/ani11061607

Long-Term Measurement of Piglet Activity Using Passive Infrared Detectors
Cited by: 4
Author(s): Roberto Besteiro, Tamara Arango, Juan Antonio Ortega, María José Alonso Fernández, Manuel R. Rodríguez
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-020-75682-6

Environmental RNA interference in two-spotted spider mite, Tetranychus urticae, reveals dsRNA processing requirements for efficient RNAi response
Cited by: 27
Author(s): Nicolas Bensoussan, S. K. Dixit, Midori Tabara, David Letwin, Maja Milojevic, Michele Antonacci, Peng‐Yu Jin, Yuka Arai, Kristie Bruinsma, Takeshi Suzuki, Teruyuki Fukuhara, Vladimir Zhurov, Sven Geibel, Ralf Nauen, Miodrag Grbić, Vojislava Grbić
Software Mentions: 2
Published: about 6 years ago

10.1186/s12885-020-07448-2

Distinctive roles of syntaxin binding protein 4 and its action target, TP63, in lung squamous cell carcinoma: a theranostic study for the precision medicine
Cited by: 8
Author(s): Bilguun Erkhem-Ochir, Kyoichi Kaira, Reika Kawabata‐Iwakawa, Susumu Rokudai, Kimihiro Shimizu, Takehiko Yokobori, Tetsunari Oyama, Ken Shirabe, Masahiko Nishiyama
Software Mentions: 2
Published: about 6 years ago

10.7717/peerj.11187

Honey bees communicate distance via non-linear waggle duration functions
Cited by: 2
Author(s): Patrick L. Kohl, Benjamin Rutschmann
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0107341

Repeatability of Feather Mite Prevalence and Intensity in Passerine Birds
Cited by: 20
Author(s): Javier Díaz-Real, David Serrano, Javier Pérez‐Tris, Sofía Fernández‐González, Ana Bermejo, Juan Antonio Calleja, Javier de la Puente, Diana De Palacio, José Luis Martínez, Rubén Moreno-Opo, Carlos Ponce, Óscar Frías, José Luis Tella, Anders Pape Møller, Jordi Figuerola, Péter L. Pap, István Kovács, Csongor I. Vágási, Leandro Meléndez, Guillermo Blanco, Eduardo Aguilera, Juan Carlos Senar, Ismael Galván, Francisco Borrás Atiénzar, Emilio Barba, José Cantó Doménech, Verónica Cortés, Juan S. Monrós, Rubén Piculo, Matthias Vögeli, Antoni Borràs, Carlos Navarro, Alexandre Mestre, Roger Jovani
Software Mentions: 2
Published: about 12 years ago

10.1007/s10493-020-00492-4

Reproductive interference and sensitivity to female pheromones in males and females of two herbivorous mite species
Cited by: 1
Author(s): Yuuji Sato, Juan M. Alba
Software Mentions: 2
Published: over 6 years ago

10.1111/eth.13069

Under adverse conditions, older small tree finch males ( Camarhynchus parvulus ) produce more offspring than younger males
Cited by: 4
Author(s): Christian Wappl, Arno Cimadom, Nikolaus Filek, Eileen Heyer, Sabine Tebbich
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-020-77519-8

Supporting elimination of lymphatic filariasis in Samoa by predicting locations of residual infection using machine learning and geostatistics
Cited by: 6
Author(s): Helen J. Mayfield, Hugh J. W. Sturrock, Benjamin F. Arnold, Ricardo Andrade‐Pacheco, Thérèse Kearns, Patricia M. Graves, Take Naseri, Robert Thomsen, Katherine Gass, Colleen L. Lau
Software Mentions: 2
Published: almost 6 years ago

10.1186/s12919-016-0062-5

Using next-generation DNA sequence data for genetic association tests based on allele counts with and without consideration of zero inflation
Cited by: 3
Author(s): Rosa González Silos, Özay Karadağ, Barbara Peil, Christine Fischer, Maria Kabisch, Carine Legrand, Justo Lorenzo Bermejo
Software Mentions: 2
Published: about 10 years ago

10.1038/s41598-020-77635-5

Geological CO2 quantified by high-temporal resolution stable isotope monitoring in a salt mine
Cited by: 3
Author(s): Alexander H. Frank, Robert van Geldern, Anssi Myrttinen, Martin Zimmer, Johannes A. C. Barth, Bruce Strauch
Software Mentions: 2
Published: almost 6 years ago

10.7717/peerj.6227

Individual tree crown delineation and tree species classification with hyperspectral and LiDAR data
Cited by: 46
Author(s): Michele Dalponte, Lorenzo Frizzera, Damiano Gianelle
Software Mentions: 2
Published: almost 8 years ago

10.1038/s41598-020-78793-2

Whole blood mRNA expression-based targets to discriminate active tuberculosis from latent infection and other pulmonary diseases
Cited by: 10
Author(s): Jéssica Dias Petrilli, Luana E. Araújo, Luciane Sussuchi da Silva, Ana Carolina Laus, Igor Müller, Rui Manuel Reis, Eduardo Martins Netto, Lee W. Riley, Sérgio Arruda, Adriano Queiroz
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0193820

Genomic differences between nasal Staphylococcus aureus from hog slaughterhouse workers and their communities
Cited by: 4
Author(s): Yaqi You, Li Song, Bareng A. S. Nonyane, Lance B. Price, Ellen K. Silbergeld
Software Mentions: 2
Published: over 8 years ago

10.1186/s12870-019-1905-9

The LsVe1L allele provides a molecular marker for resistance to Verticillium dahliae race 1 in lettuce
Cited by: 11
Author(s): Patrik Inderbitzin, Marilena Christopoulou, Dean Lavelle, Sebastian Reyes-Chin-Wo, Richard W. Michelmore, Krishna V. Subbarao, Ivan Šimko
Software Mentions: 2
Published: over 7 years ago

10.1007/s00394-012-0391-8

Characterization of microbial metabolism of Syrah grape products in an in vitro colon model using targeted and non-targeted analytical approaches
Cited by: 58
Author(s): Anna‐Marja Aura, Ismo Mattila, Tuulia Hyötyläinen, Peddinti Gopalacharyulu, Véronique Cheynier, Jean‐Marc Souquet, Magali Bes, Carine Le Bourvellec, Sylvain Guyot, Matej Orešič
Software Mentions: 2
Published: over 14 years ago

10.1371/journal.pone.0252807

Do oral contraceptives affect young women’s memory? Dopamine-dependent working memory is influenced by COMT genotype, but not time of pill ingestion
Cited by: 9
Author(s): Laura Gravelsins, Katherine Duncan, Gillian Einstein
Software Mentions: 2
Published: over 5 years ago

10.7717/peerj.7623

A stepping stone to compositionality in chimpanzee communication
Cited by: 16
Author(s): Linda Oña, Wendy Sandler, Katja Liebal
Software Mentions: 2
Published: about 7 years ago

10.7717/peerj.338

Honey bee sting pain index by body location
Cited by: 8
Author(s): Michael L. Smith
Software Mentions: 2
Published: over 12 years ago

10.1038/s41598-020-79616-0

Effect of temperature on the unimodal size scaling of phytoplankton growth
Cited by: 6
Author(s): Cristina Fernández‐González, Emilio Marañón
Software Mentions: 2
Published: almost 6 years ago

10.1093/gbe/evu003

Recombination Shapes Genome Architecture in an Organism from the Archaeal Domain
Cited by: 12
Author(s): David J. Krause, Xavier Didelot, Hinsby Cadillo‐Quiroz, Rachel J. Whitaker
Software Mentions: 2
Published: almost 13 years ago

10.3390/ijms21031166

Quantitative Proteomics to Identify Nuclear RNA-Binding Proteins of Malat1
Cited by: 15
Author(s): Marian Scherer, Michal Levin, Falk Butter, Marion Scheibe
Software Mentions: 2
Published: over 6 years ago

10.3390/ijms21031142

Cell-Based Blood Biomarkers for Myalgic Encephalomyelitis/Chronic Fatigue Syndrome
Cited by: 14
Author(s): Daniel Missailidis, Oana Sanislav, Claire Y. Allan, Sarah J. Annesley, Paul R. Fisher
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0067142

Layered Signaling Regulatory Networks Analysis of Gene Expression Involved in Malignant Tumorigenesis of Non-Resolving Ulcerative Colitis via Integration of Cross-Study Microarray Profiles
Cited by: 13
Author(s): Shengjun Fan, Zhenyu Pan, Qiang Geng, Xin Li, Yefan Wang, Yu An, Yan Xu, Lu Tie, Yan Pan, Xuejun Li
Software Mentions: 2
Published: over 13 years ago

10.1093/gbe/evz229

The Mitochondrial Genome of Eleusine indica and Characterization of Gene Content Within Poaceae
Cited by: 3
Author(s): Nathan Hall, Hui Zhang, Jeffrey P. Mower, J. Scott McElroy, Leslie R. Goertzen
Software Mentions: 2
Published: about 7 years ago

10.7554/eLife.04979

Impaired fast-spiking interneuron function in a genetic mouse model of depression
Cited by: 89
Author(s): Jonas‐Frederic Sauer, Michael Strüber, Marlene Bartos
Software Mentions: 2
Published: over 11 years ago

10.1038/s41598-021-81073-2

Small mammal glucocorticoid concentrations vary with forest fragment size, trap type, and mammal taxa in the Interior Atlantic Forest
Cited by: 6
Author(s): Sarah A. Boyle, Noé U. de la Sancha, Pastor Pérez, David Kabelik
Software Mentions: 2
Published: almost 6 years ago

10.3389/fpls.2021.687094

Asymmetric Reproductive Barriers and Gene Flow Promote the Rise of a Stable Hybrid Zone in the Mediterranean High Mountain
Cited by: 7
Author(s): Mohamed Abdelaziz, A. Jesús Muñoz-Pajares, Modesto Berbel, Ana García-Muñoz, José M. Gómez, Francisco Perfectti
Software Mentions: 2
Published: about 5 years ago

10.1186/s12866-015-0535-0

Characterising atypical Candida albicans clinical isolates from six third-level hospitals in Bogotá, Colombia
Cited by: 16
Author(s): Giovanni Rodríguez-Leguizamón, Alessandro Fiori, Luisa F. López, Beatriz L. Gómez, Claudia Marcela Parra-Giraldo, Arley Gómez-López, Carlos F. Suárez, Andrés Ceballos, Patrick Van Dijck, Manuel A. Patarroyo
Software Mentions: 2
Published: about 11 years ago

10.1038/s41598-021-82826-9

Automated diagnostic support system with deep learning algorithms for distinction of Philadelphia chromosome-negative myeloproliferative neoplasms using peripheral blood specimen
Cited by: 6
Author(s): Konobu Kimura, Tomohiko Ai, Yuki Horiuchi, Akihiko Matsuzaki, Kumiko Nishibe, Setsuko Marutani, Kaori Saito, Kimiko Kaniyu, Ikki Takehara, Kinya Uchihashi, Akimichi Ohsaka, Yoko Tabe
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-021-83286-x

Rainfall as a trigger of ecological cascade effects in an Australian groundwater ecosystem
Cited by: 16
Author(s): Mattia Saccò, Alison J. Blyth, William F. Humphreys, Steven J. Cooper, Nicole E. White, Matthew A. Campbell, Mahsa Mousavi‐Derazmahalleh, Quan Hua, Debashish Mazumder, Colin Smith, Christian Griebler, Kliti Grice
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0209886

Trait expression and signatures of adaptation in response to nitrogen addition in the common wetland plant Juncus effusus
Cited by: 2
Author(s): Jennifer Born, Stefan G. Michalski
Software Mentions: 2
Published: almost 8 years ago

10.1038/s41598-021-83491-8

Cellular correlates of gray matter volume changes in magnetic resonance morphometry identified by two-photon microscopy
Cited by: 26
Author(s): Livia Asan, Claudia Falfán-Melgoza, Carlo A. Beretta, Markus Sack, Lei Zheng, Wolfgang Weber‐Fahr, Thomas Kuner, Johannes Knabbe
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-021-83637-8

A comparative analysis of SLA-DRB1 genetic diversity in Colombian (creoles and commercial line) and worldwide swine populations
Cited by: 2
Author(s): Carmen Teresa Celis-Giraldo, Michel David Bohórquez, Milena Camargo, Carlos F. Suárez, Anny Camargo, Kewin Rodríguez-Obediente, Alejandra Martínez, Carlos Edmundo Lucero, Byron Antonio Ruíz Hernández, Raúl Manzano-Román, Manuel A. Patarroyo
Software Mentions: 2
Published: over 5 years ago