Projects: pypi: refget
https://packages.ecosyste.ms/registries/pypi.org/packages/refget
Python client for refget
2 versions
Latest release: about 4 years ago
22 downloads last month
Enhanced Analysis
Repository Activity:
Repository Owner:
Refgenie (organization)
Standardized assets for reference genomes Institutional
Standardized assets for reference genomes Institutional
README Analysis:
Science Score: 95/100
Starting Score: 100 points
Bonuses:
-
+15
Institutional repository owner
Repository owned by research institution
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem -
-10
No science terms in description
No scientific terms found in description
Very Likely Science (95)
Papers Mentioning refget 4
10.1371/journal.pcbi.1007664
Tximeta: Reference sequence checksums for provenance identification in RNA-seqCited by: 122
Author(s): Michael I. Love, Charlotte Soneson, Peter Hickey, Lisa K. Johnson, Nicholas Pierce, Lori Shepherd, Martin Morgan, Rob Patro
Software Mentions: 19
Published: over 5 years ago
10.1093/gigascience/giz149
Refgenie: a reference genome resource managerCited by: 28
Author(s): Michał Stolarczyk, Vincent Reuter, Jason P. Smith, Neal E. Magee, Nathan C. Sheffield
Software Mentions: 9
Published: over 5 years ago
10.1371/journal.pone.0239883
SeqRepo: A system for managing local collections of biological sequencesCited by: 6
Author(s): Reece K. Hart, Andreas Prlić
Software Mentions: 3
Published: over 4 years ago
10.12688/f1000research.28449.1
Recommendations for the FAIRification of genomic track metadataCited by: 7
Author(s): Sveinung Gundersen, Sanjay Boddu, Salvador Capella-Gutierrez, Finn Drabløs, José Marı́a Fernández, Radmila Kompova, Kieron Taylor, Dmytro Titov, Daniel R. Zerbino, Eivind Hovig
Software Mentions: 2
Published: over 4 years ago