Ecosyste.ms: Papers

10.1371/journal.pone.0183417

Association of gene expression with biomass content and composition in sugarcane
Cited by: 23
Author(s): Nam V. Hoang, Agnelo Furtado, Angela O'Keeffe, Frederik C. Botha, Robert J. Henry
Software Mentions: 15
Published: about 7 years ago

10.1038/s41598-019-40285-3

Phenotypic and transcriptomic characterization of canine myeloid-derived suppressor cells
Cited by: 22
Author(s): Michelle R. Goulart, Sabina I. Hlavaty, Yu-Mei Chang, Gerry Polton, Anneliese Stell, James A. Perry, Ying Wu, Eshita Sharma, John Broxholme, Avery C. Lee, Balázs Szladovits, Mark Turmaine, John G. Gribben, Dong Xia, Oliver A. Garden
Software Mentions: 7
Published: over 5 years ago

10.1038/s41598-020-60638-7

Aberrant expression of PAR bZIP transcription factors is associated with epileptogenesis, focus on hepatic leukemia factor
Cited by: 7
Author(s): Lukáš Rambousek, Tilo Gschwind, Carlos Lafourcade, Jean-Charles Paterna, Linda Dib, Jean‐Marc Fritschy, Adriano Fontana
Software Mentions: 5
Published: over 4 years ago

10.18632/oncotarget.11772

Hypoxia-responsive miR-210 promotes self-renewal capacity of colon tumor-initiating cells by repressing ISCU and by inducing lactate production
Cited by: 47
Author(s): Pit Ullmann, Komal Qureshi-Baig, Fabien Rodriguez, Aurélien Ginolhac, Yannic Nonnenmacher, Dominik Ternes, Jil Weiler, Karoline Gäbler, Christelle Bahlawane, Karsten Hiller, Serge Haan, Elisabeth Letellier
Software Mentions: 5
Published: about 8 years ago

10.1002/ps.6061

Toxicological and molecular profiling of insecticide resistance in a Brazilian strain of fall armyworm resistant to Bt Cry1 proteins
Cited by: 24
Author(s): Debora Boaventura, Benjamin Buer, Niklas Hamaekers, Frank Maiwald, Ralf Nauen
Software Mentions: 5
Published: about 4 years ago

10.1038/s41598-021-92053-x

Jejunal mucosa proteomics unravel metabolic adaptive processes to mild chronic heat stress in dairy cows
Cited by: 11
Author(s): Franziska Koch, Dirk Albrecht, Solvig Görs, Björn Kuhla
Software Mentions: 4
Published: over 3 years ago

10.1038/s41598-020-71889-9

Gene expression is stable in a complete CIB1 knockout keratinocyte model
Cited by: 2
Author(s): Elias Imahorn, Magomet Aushev, Stefan Herms, Per Hoffmann, Sven Cichon, Julia Reichelt, Peter Itin, Bettina Burger
Software Mentions: 4
Published: about 4 years ago

10.3389/fphar.2019.00303

Transcriptome-Wide Effects of Sphingosine Kinases Knockdown in Metastatic Prostate and Breast Cancer Cells: Implications for Therapeutic Targeting
Cited by: 17
Author(s): Heba Alshaker, Qi Wang, Daniel Brewer, Dmitri Pchejetski
Software Mentions: 4
Published: over 5 years ago

10.1186/s12902-019-0442-8

CRISPR-Cas9-mediated knockout of SPRY2 in human hepatocytes leads to increased glucose uptake and lipid droplet accumulation
Cited by: 5
Author(s): Naomi L. Cook, Milos Pjanic, Andrew Emmerich, Abhiram Rao, Susanne Hetty, Joshua Knowles, Thomas Quertermous, Casimiro Castillejo-López, Erik Ingelsson
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pgen.1007845

Biallelic mutations in nucleoporin NUP88 cause lethal fetal akinesia deformation sequence
Cited by: 21
Author(s): Edith Bonnin, Pauline Cabochette, Alessandro Filosa, Ramona Jühlen, Shoko Komatsuzaki, Mohammed Hezwani, Achim Dickmanns, Valérie Martinelli, Marjorie Vermeersch, Lynn Supply, Natércia C. T. Martins, Laurence Pirenne, Gianina Ravenscroft, Marcus Lombard, Sarah S.A. Port, Christiane Spillner, Sandra Janssens, Ellen Roets, Jo Van Dorpe, Martin Lammens, Ralph H. Kehlenbach, Ralf Ficner, Nigel G. Laing, Katrin Hoffmann, Benoît Vanhollebeke, Birthe Fahrenkrog
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0235575

Comparative gut transcriptome analysis of Diatraea saccharalis in response to the dietary source
Cited by: 4
Author(s): Daniel D. Noriega, Fabrício Barbosa Monteiro Arraes, José Dijair Antonino, Leonardo Lima Pepino Macedo, Fernando Fonseca, Roberto Coiti Togawa, Priscila Grynberg, Maria C. M. Silva, A. S. Negrisoli, Carolina Vianna Morgante, Maria Fátima Grossi-de-Sá
Software Mentions: 3
Published: over 4 years ago

10.3389/fphys.2020.588450

Transcriptome Analysis and Knockdown of the Juvenile Hormone Esterase Gene Reveal Abnormal Feeding Behavior in the Sugarcane Giant Borer
Cited by: 5
Author(s): Daniel D. Noriega, Fabrício Barbosa Monteiro Arraes, José Dijair Antonino, Leonardo Lima Pepino Macedo, Fernando Fonseca, Roberto Coiti Togawa, Priscila Grynberg, Maria C. M. Silva, A. S. Negrisoli, Maria Fátima Grossi-de-Sá
Software Mentions: 3
Published: about 4 years ago

10.1242/dmm.030536

Comprehensive analysis of gene expression patterns in Friedreich's ataxia fibroblasts by RNA sequencing reveals altered levels of protein synthesis factors and solute carriers
Cited by: 34
Author(s): Marek Napierala, Yanjie Li, Yue Lu, Kevin Lin, Lauren Hauser, David R. Lynch, Марек Напиерала
Software Mentions: 3
Published: about 7 years ago

10.1242/dmm.045989

Deletion of <i>Yy1</i> in mouse lung epithelium unveils molecular mechanisms governing pleuropulmonary blastoma pathogenesis
Cited by: 3
Author(s): Kim Landry-Truchon, Nicolas Houde, Mickaël Lhuillier, L. Charron, Alice Hadchouel, Christophe Delacourt, William D. Foulkes, Louise Galmiche-Rolland, Lucie Jeannotte
Software Mentions: 3
Published: almost 5 years ago

10.7717/peerj.3631

RNA-seq reveals more consistent reference genes for gene expression studies in human non-melanoma skin cancers
Cited by: 34
Author(s): Van L.T. Hoang, Lisa Tom, Xiu-Cheng Quek, Jean-Marie Tan, Elizabeth Payne, Lynlee L. Lin, Sudipta Sinnya, Anthony P. Raphael, Duncan Lambie, Ian H. Frazer, Marcel E. Dinger, H. Peter Soyer, Tarl W. Prow
Software Mentions: 3
Published: about 7 years ago

10.1186/s13058-015-0666-0

ELF5 isoform expression is tissue-specific and significantly altered in cancer
Cited by: 33
Author(s): Catherine Piggin, Daniel Roden, David Gallego‐Ortega, Heather Lee, Samantha Oakes, Christopher J. Ormandy
Software Mentions: 2
Published: almost 9 years ago

10.3390/ani11020585

Distress Regulates Different Pathways in the Brain of Common Carp: A Preliminary Study
Cited by: 4
Author(s): Alexander Burren, Constanze Pietsch
Software Mentions: 2
Published: over 3 years ago

10.1186/s12859-015-0637-6

RDML-Ninja and RDMLdb for standardized exchange of qPCR data
Cited by: 11
Author(s): Jan M. Ruijter, Steve Lefever, Jasper Anckaert, Jan Hellemans, Michael W. Pfaffl, Vladimı́r Beneš, Stephen A. Bustin, Jo Vandesompele, Andreas Untergasser
Software Mentions: 2
Published: over 9 years ago

10.1186/s12915-021-01056-7

Transcriptomic analysis of primate placentas and novel rhesus trophoblast cell lines informs investigations of human placentation
Cited by: 6
Author(s): Jimi L. Rosenkrantz, Jessica Gaffney, Victoria H. J. Roberts, Lucia Carbone, Shawn L. Chavez
Software Mentions: 2
Published: over 3 years ago

10.1186/s12864-019-5608-2

Purification of high-quality RNA from a small number of fluorescence activated cell sorted zebrafish cells for RNA sequencing purposes
Cited by: 4
Author(s): Siebe Loontiens, Lisa Depestel, Suzanne Vanhauwaert, Givani Dewyn, Charlotte Gistelinck, Karen Verboom, Wouter Van Loocke, Filip Matthijssens, Andy Willaert, Jo Vandesompele, Franki Speleman, Kaat Durinck
Software Mentions: 2
Published: over 5 years ago

10.1186/s40478-016-0306-7

C9orf72 is differentially expressed in the central nervous system and myeloid cells and consistently reduced in C9orf72, MAPT and GRN mutation carriers
Cited by: 54
Author(s): Patrizia Rizzu, Cornelis Blauwendraat, Sasja Heetveld, Emily M. Lynes, Melissa Castillo-Lizardo, Ashutosh Dhingra, Elwira Pyż, Markus A. Hobert, Matthis Synofzik, Javier Simón‐Sánchez, Margherita Francescatto, Peter Heutink
Software Mentions: 2
Published: over 8 years ago

10.1007/s12035-018-1406-0

Distinct Expression Pattern of Epigenetic Machinery Genes in Blood Leucocytes and Brain Cortex of Depressive Patients
Cited by: 8
Author(s): Romain Rey, Jean-Christophe Chauvet-Gélinier, Marie-Françoise Suaud-Chagny, Sylviane Ragot, Bernard Bonin, Thierry d’Amato, Jean-Raymond Teyssier
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0187590

Do microplastic particles affect Daphnia magna at the morphological, life history and molecular level?
Cited by: 133
Author(s): Hannes K. Imhof, Jakub Rusek, M. Thiel, Justyna Wolinska, Christian Laforsch
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0233109

Selection and validation of reference genes for normalisation of gene expression in ischaemic and toxicological studies in kidney disease
Cited by: 8
Author(s): Sanjeeva Herath, Hongying Dai, Jonathan Erlich, Amy Y M Au, Kylie M. Taylor, Lena Succar, Z. H. Endre
Software Mentions: 2
Published: over 4 years ago

10.3390/cells8080870

Teratogenic Rubella Virus Alters the Endodermal Differentiation Capacity of Human Induced Pluripotent Stem Cells
Cited by: 14
Author(s): Nicole C. Bilz, Edith Willscher, Hans Binder, Janik Böhnke, Megan L. Stanifer, Denise Hübner, Steeve Boulant, Uwe G. Liebert, Claudia Claus
Software Mentions: 2
Published: about 5 years ago

10.3389/fcell.2021.664317

Long-Read Sequencing to Unravel Complex Structural Variants of CEP78 Leading to Cone-Rod Dystrophy and Hearing Loss
Cited by: 10
Author(s): Giulia Ascari, Nanna Dahl Rendtorff, Marieke De Bruyne, Julie De Zaeytijd, Michel Van Lint, Miriam Bauwens, Mattias Van Heetvelde, Gavin Arno, Julie A. Jacob, David Creytens, Jo Van Dorpe, Thalia Van Laethem, Toon Rosseel, Tim De Pooter, Peter De Rijk, Wouter De Coster, Björn Menten, Alfredo Dueñas Rey, Mojca Stražišar, Mette Bertelsen, Lisbeth Tranebjærg, Elfride De Baere
Software Mentions: 2
Published: over 3 years ago

10.3389/fcell.2020.00547

Mating to Intact, but Not Vasectomized, Males Elicits Changes in the Endometrial Transcriptome: Insights From the Bovine Model
Cited by: 13
Author(s): Sandra Recuero, José María Sánchez, Yentel Mateo‐Otero, Sandra Bagés-Arnal, Michael McDonald, Susanta K. Behura, Thomas E. Spencer, David A. Kenny, Marc Yeste, P. Lonergan, Beatriz Fernandez‐Fuertes
Software Mentions: 2
Published: over 4 years ago

10.3389/fmicb.2017.02586

Abundance of Secreted Proteins of Trichoderma reesei Is Regulated by Light of Different Intensities
Cited by: 25
Author(s): Eva Stappler, Jonathan D. Walton, Sabrina Beier, Monika Schmoll
Software Mentions: 2
Published: almost 7 years ago

10.1534/g3.116.037333

Transcriptome Analysis of<i>Drosophila melanogaster</i>Third Instar Larval Ring Glands Points to Novel Functions and Uncovers a Cytochrome p450 Required for Development
Cited by: 30
Author(s): Danielle Christesen, Ying Yang, Jason Somers, Charles Robin, Tamar E. Sztal, Philip Batterham, Trent Perry
Software Mentions: 2
Published: almost 8 years ago

10.3390/genes12020320

Differential Expression of BARD1 Isoforms in Melanoma
Cited by: 2
Author(s): Lorissa I. McDougall, Ryan M. Powell, Magdalena Ratajska, Chiemi F. Lynch-Sutherland, Sultana Mehbuba Hossain, George A. R. Wiggins, Agnieszka Harazin-Lechowska, Bożena Cybulska-Stopa, Jyoti Motwani, Erin C. Macaulay, Glen Reid, Logan C. Walker, Janusz Ryś, Michael R. Eccles
Software Mentions: 2
Published: over 3 years ago

10.1186/s13099-020-00386-1

The absence of murine cathelicidin-related antimicrobial peptide impacts host responses enhancing Salmonella enterica serovar Typhimurium infection
Cited by: 5
Author(s): Danisa M. Bescucci, Sandra Clarke, Catherine L. J. Brown, Valerie F. Boras, Tony Montina, Richard R. E. Uwiera, G. Douglas Inglis
Software Mentions: 2
Published: almost 4 years ago

10.1038/srep27618

Localization of PPAR isotypes in the adult mouse and human brain
Cited by: 170
Author(s): Anna S. Warden, Jay Truitt, Morgan Merriman, Olga N. Ponomareva, Kelly G. Jameson, Laura B. Ferguson, R. Dayne Mayfield
Software Mentions: 2
Published: over 8 years ago

10.1038/s41598-018-24085-9

Refined protocols of tamoxifen injection for inducible DNA recombination in mouse astroglia
Cited by: 88
Author(s): Henriette Jahn, Carmen V. Kasakow, Andreas G. Helfer, Julian A. Michely, Alexei Verkhratsky, Hans H. Maurer, Anja Scheller, Frank Kirchhoff
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-019-39979-5

Elevated atmospheric CO2 concentrations alter grapevine (Vitis vinifera) systemic transcriptional response to European grapevine moth (Lobesia botrana) herbivory
Cited by: 12
Author(s): Annette Reineke, Mohamed E. Selim
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-019-39489-4

Aspirin impairs acetyl-coenzyme A metabolism in redox-compromised yeast cells
Cited by: 4
Author(s): Gianluca Farrugia, Maria Azzopardi, Christian Saliba, Godfrey Grech, Angelina S. Gross, Jelena Pistolic, Vladimír Beneš, Neville Vassallo, Joseph Borg, Frank Madeo, Tobias Eisenberg, Rena Balzan
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-021-96870-y

Small RNA sequencing evaluation of renal microRNA biomarkers in dogs with X-linked hereditary nephropathy
Cited by: 6
Author(s): Candice P. Chu, Shiguang Liu, Wenping Song, Ethan Y. Xu, Mary B. Nabity
Software Mentions: 2
Published: about 3 years ago

10.1186/s12974-019-1615-0

The effects of n-6 polyunsaturated fatty acid deprivation on the inflammatory gene response to lipopolysaccharide in the mouse hippocampus
Cited by: 9
Author(s): Shoug Alashmali, Lin Lin, Marc-Olivier Trépanier, Giulia Cisbani, Richard P. Bazinet
Software Mentions: 2
Published: almost 5 years ago

10.3390/ijms20184487

Induction of Articular Chondrogenesis by Chitosan/Hyaluronic-Acid-Based Biomimetic Matrices Using Human Adipose-Derived Stem Cells
Cited by: 37
Author(s): Yijiang Huang, Daniel Seitz, Fabian König, Peter E. Müller, Volkmar Jansson, Roland M. Klar
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0194017

A high-throughput 3’ UTR reporter screening identifies microRNA interactomes of cancer genes
Cited by: 14
Author(s): Gert Van Peer, Evelien Mets, Shana Claeys, Ines De Punt, Steve Lefever, Maté Ongenaert, Pieter Rondou, Franki Speleman, Pieter Mestdagh, Jo Vandesompele
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0133860

Tissue Regeneration and Biomineralization in Sea Urchins: Role of Notch Signaling and Presence of Stem Cell Markers
Cited by: 45
Author(s): Helena C. Reinardy, Clifton W. Emerson, Jason M. Manley, Andrea Bodnár
Software Mentions: 1
Published: about 9 years ago

10.1007/s10549-018-4900-1

Field template-based design and biological evaluation of new sphingosine kinase 1 inhibitors
Cited by: 13
Author(s): Heba Alshaker, Shyam Srivats, Danielle Monteil, Qi Wang, Caroline M. R. Low, Dmitri Pchejetski
Software Mentions: 1
Published: over 6 years ago

10.3390/cancers12113138

AGTR1 Is Overexpressed in Neuroendocrine Neoplasms, Regulates Secretion and May Potentially Serve as a Target for Molecular Imaging and Therapy
Cited by: 1
Author(s): Samantha Exner, Claudia Schuldt, Sachindra Sachindra, Jing Du, Isabelle Heing-Becker, Kai Licha, Bertram Wiedenmann, Carsten Grötzinger
Software Mentions: 1
Published: about 4 years ago

10.3390/cells9030770

Validation of Reference Genes for Gene Expression Studies by RT-qPCR in HepaRG Cells during Toxicity Testing and Disease Modelling
Cited by: 5
Author(s): Joanna Brzeszczyńska, Filip Brzeszczyński, Kay Samuel, Katie Morgan, Steven D. Morley, John Plevris, Peter Hayes
Software Mentions: 1
Published: over 4 years ago

10.3390/ijms20215421

EPO and TMBIM3/GRINA Promote the Activation of the Adaptive Arm and Counteract the Terminal Arm of the Unfolded Protein Response after Murine Transient Cerebral Ischemia
Cited by: 12
Author(s): Pardes Habib, Ann-Sophie Stamm, Jörg B. Schulz, Arno Reich, Alexander Slowik, Sandro Capellmann, Michael Huber, Thomas Wilhelm
Software Mentions: 1
Published: about 5 years ago

10.1186/s13058-014-0426-6

Leptin induces upregulation of sphingosine kinase 1 in oestrogen receptor-negative breast cancer via Src family kinase-mediated, janus kinase 2-independent pathway
Cited by: 60
Author(s): Heba Alshaker, Jonathan Krell, Adam E. Frampton, Jonathan Waxman, Oleg Blyuss, Alexey Zaikin, Mathias Winkler, Justin Stebbing, Ernesto Yagüe, Dimitri Pchejetski
Software Mentions: 1
Published: about 10 years ago

10.3390/biom11050714

A Spatiotemporal Characterisation of Redox Molecules in Planarians, with a Focus on the Role of Glutathione during Regeneration
Cited by: 5
Author(s): Karolien Bijnens, Vincent Jaenen, Annelies Wouters, Nathalie Leynen, Nicky Pirotte, Tom Artois, Karen Smeets
Software Mentions: 1
Published: over 3 years ago

10.1186/s12940-016-0162-8

Recent exposure to ultrafine particles in school children alters miR-222 expression in the extracellular fraction of saliva
Cited by: 27
Author(s): Annette Vriens, Tim S. Nawrot, Nelly D. Saenen, Eline B. Provost, Michał Kiciński, Wouter Lefebvre, Charlotte Vanpoucke, Jan Van Deun, Olivier De Wever, Karen Vrijens, Patrick De Boever, Michelle Plusquin
Software Mentions: 1
Published: over 8 years ago

10.1002/2211-5463.12002

A specific role for<i><scp>PRND</scp></i>in goat foetal Leydig cells is suggested by prion family gene expression during gonad development in goats and mice
Cited by: 3
Author(s): Aurélie Allais‐Bonnet, Johan Castille, Maëlle Pannetier, Bruno Passet, Maëva Elzaïat, Marjolaine André, Fatemeh Montazer‐Torbati, Katayoun Moazami‐Goudarzi, Jean‐Luc Vilotte, Eric Pailhoux
Software Mentions: 1
Published: almost 9 years ago

10.3389/fnagi.2019.00052

Serum miRNAs Expression and SNAP-25 Genotype in Alzheimer’s Disease
Cited by: 17
Author(s): Simone Agostini, Roberta Mancuso, G Liuzzo, Elisabetta Bolognesi, Andrea Saul Costa, Anna Bianchi, Mario Clerici
Software Mentions: 1
Published: over 5 years ago

10.3389/fcvm.2020.610344

Differential Induction of the ADAM17 Regulators iRhom1 and 2 in Endothelial Cells
Cited by: 16
Author(s): Aaron Babendreyer, Diana M. Rojas-González, Anja Adelina Giese, Sandra Fellendorf, Stefan Düsterhöft, Petra Mela, Andreas Ludwig
Software Mentions: 1
Published: almost 4 years ago

10.3390/ijms20225699

miRNAs Regulate Cytokine Secretion Induced by Phosphorylated S100A8/A9 in Neutrophils
Cited by: 11
Author(s): Nicolas Jung, Véronique Schenten, Jean-Luc Bueb, Fabrice Tolle, Sabrina Bréchard
Software Mentions: 1
Published: almost 5 years ago

10.3390/ijms21124284

Hydrogen Sulfide Treatment Improves Post-Infarct Remodeling and Long-Term Cardiac Function in CSE Knockout and Wild-Type Mice
Cited by: 19
Author(s): Leigh J. Ellmers, Evelyn M Templeton, Anna P Pilbrow, Chris Frampton, Isao Ishii, Philip K. Moore, Madhav Bhatia, A. Mark Richards, Vicky A. Cameron
Software Mentions: 1
Published: over 4 years ago

10.3389/fcimb.2018.00368

The 9H-Fluoren Vinyl Ether Derivative SAM461 Inhibits Bacterial Luciferase Activity and Protects Artemia franciscana From Luminescent Vibriosis
Cited by: 0
Author(s): Alberto J. Martín‐Rodríguez, Sergio J. Álvarez-Méndez, Caroline Overå, Kartik Baruah, Tânia Margarida Lourenço, Parisa Norouzitallab, Peter Bossier, Victor S. Martı́n, José J. Fernández
Software Mentions: 1
Published: about 6 years ago

10.3389/fendo.2018.00146

Octreotide Does Not Inhibit Proliferation in Five Neuroendocrine Tumor Cell Lines
Cited by: 24
Author(s): Samantha Exner, Vikas Prasad, Bertram Wiedenmann, Carsten Grötzinger
Software Mentions: 1
Published: over 6 years ago

10.3389/fimmu.2021.671743

Up-Regulation of Immune Checkpoints in the Thymus of PRRSV-1-Infected Piglets in a Virulence-Dependent Fashion
Cited by: 9
Author(s): Inés Ruedas‐Torres, I.M. Rodríguez-Gómez, José María Sánchez‐Carvajal, Silvia Guil‐Luna, Fernanda Larenas‐Muñoz, F. J. Pallarés, L. Carrasco, J. Gómez-Laguna
Software Mentions: 1
Published: over 3 years ago

10.3390/ijms22031434

Effect of RIP Overexpression on Abiotic Stress Tolerance and Development of Rice
Cited by: 5
Author(s): Pieter Wytynck, Jeroen Lambin, Simin Chen, Sinem Demirel Aşçı, Isabel Verbeke, Jeroen De Zaeytijd, Kondeti Subramanyam, Els J.M. Van Damme
Software Mentions: 1
Published: almost 4 years ago

10.1155/2020/1481572

HuR Affects Proliferation and Apoptosis of Chronic Lymphocytic Leukemia Cells via NF-<i>κ</i>B Pathway
Cited by: 2
Author(s): Kai Xiao, Lin Yang, Xinfeng Gao, Yu An, Wei Xie, Guo Jingquan
Software Mentions: 1
Published: about 4 years ago

10.1186/s12860-020-00322-w

Scl-Ab reverts pro-osteoclastogenic signalling and resorption in estrogen deficient osteocytes
Cited by: 8
Author(s): Hollie Allison, Gill Holdsworth, Laoise M. McNamara
Software Mentions: 1
Published: about 4 years ago

10.3389/fpls.2020.00327

Cold Acclimation and Deacclimation of Two Garden Rose Cultivars Under Controlled Daylength and Temperature
Cited by: 11
Author(s): Lin Ouyang, Leen Leus, Ellen De Keyser, Marie-Christine Van Labeke
Software Mentions: 1
Published: over 4 years ago

10.1111/1365-2435.13408

Distinct telomere differences within a reproductively bimodal common lizard population
Cited by: 12
Author(s): Darryl McLennan, Hans Recknagel, Pat Monaghan
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms221910528

Characterisation of Gel-Forming Mucins Produced In Vivo and In Ex Vivo Conjunctival Explant Cultures
Cited by: 2
Author(s): Sara I. Van Acker, Bert Van den Bogerd, Zoë P. Van Acker, Agnė Vailionytė, Michel Haagdorens, Carina Koppen, Sorcha Ní Dhubhghaill, Darlene A. Dartt, Isabel Pintelon
Software Mentions: 1
Published: about 3 years ago

10.3390/genes10050363

Antisense Oligonucleotide-Based Downregulation of the G56R Pathogenic Variant Causing NR2E3-Associated Autosomal Dominant Retinitis Pigmentosa
Cited by: 17
Author(s): Sarah Naessens, Laurien Ruysschaert, Steve Lefever, Frauke Coppieters, Elfride De Baere
Software Mentions: 1
Published: over 5 years ago

10.3390/genes12010003

Oxidative Stress, Glutathione Metabolism, and Liver Regeneration Pathways Are Activated in Hereditary Tyrosinemia Type 1 Mice upon Short-Term Nitisinone Discontinuation
Cited by: 8
Author(s): Haaike Colemonts-Vroninks, Jessie Neuckermans, Lionel Marcélis, Paul Claes, Steven Branson, Georges Casimir, Philippe Goyens, Guy Martens, Tamara Vanhaecke, Joery De Kock
Software Mentions: 1
Published: almost 4 years ago

10.3390/ijms221910667

Generation of Mesenchymal Cell Lines Derived from Aged Donors
Cited by: 6
Author(s): María Piñeiro-Ramil, Clara Sanjurjo‐Rodríguez, Silvia Rodríguez-Fernández, Rocío Castro-Viñuelas, Tamara Hermida‐Gómez, Francisco J. Blanco, Isaac Fuentes‐Boquete, Silvia Díaz‐Prado
Software Mentions: 1
Published: about 3 years ago

10.3390/nu11030548

Anti-Inflammatory Effects of Pomegranate Peel Extracts on In Vitro Human Intestinal Caco-2 Cells and Ex Vivo Porcine Colonic Tissue Explants
Cited by: 53
Author(s): Fabio Mastrogiovanni, Anindya Mukhopadhya, Nicola Lacetera, M. F. Ryan, Annalisa Romani, Roberta Bernini, T. Sweeney
Software Mentions: 1
Published: over 5 years ago

10.1038/s41438-021-00616-w

An optimized protocol for stepwise optimization of real-time RT-PCR analysis
Cited by: 32
Author(s): Fangzhou Zhao, Nathan A Maren, Pawel Z. Kosentka, Ying-Yu Liao, Hongyan Lü, James R Duduit, Decai Huang, Hamid Ashrafi, Tuanjie Zhao, Alejandra I. Huerta, Thomas G. Ranney, Wusheng Liu
Software Mentions: 1
Published: over 3 years ago

10.1186/s40104-020-00508-4

Modulations of genes related to gut integrity, apoptosis, and immunity underlie the beneficial effects of Bacillus amyloliquefaciens CECT 5940 in broilers fed diets with different protein levels in a necrotic enteritis challenge model
Cited by: 23
Author(s): Kosar Gharib-Naseri, Juliano César de Paula Dorigam, Kiran Doranalli, Sarbast K. Kheravii, Robert A. Swick, Mingan Choct, Shu‐Biao Wu
Software Mentions: 1
Published: about 4 years ago

10.1016/j.psj.2021.101254

Zinc hydroxychloride supplementation improves tibia bone development and intestinal health of broiler chickens
Cited by: 13
Author(s): Hong T. Nguyen, Natalie K. Morgan, J. R. Roberts, Shubiao Wu, Robert A. Swick, Majid Toghyani
Software Mentions: 1
Published: over 3 years ago

10.1073/pnas.1820130116

Heat stress directly impairs gut integrity and recruits distinct immune cell populations into the bovine intestine
Cited by: 131
Author(s): Franziska Koch, Ulrike Thom, Elke Albrecht, Rosemarie Weikard, Wietje Nolte, Björn Kuhla, Christa Kühn
Software Mentions: 1
Published: over 5 years ago

10.3390/ani11051432

Monoglyceride Blend Reduces Mortality, Improves Nutrient Digestibility, and Intestinal Health in Broilers Subjected to Clinical Necrotic Enteritis Challenge
Cited by: 6
Author(s): Alip Kumar, Sarbast K. Kheravii, Lily Li, Shu‐Biao Wu
Software Mentions: 1
Published: over 3 years ago

10.1038/srep33943

Differential expression of miR-184 in temporal lobe epilepsy patients with and without hippocampal sclerosis – Influence on microglial function
Cited by: 11
Author(s): Bénédicte Danis, Marijke van Rikxoort, Anita Kretschmann, Jiong Zhang, Patrice Godard, Lidija Andonovic, Franziska Siegel, Pitt Niehusmann, Étienne Hanon, Daniel Delev, Marec von Lehe, Rafał M. Kamiński, Alexander Pfeifer, Patrik Foerch
Software Mentions: 1
Published: about 8 years ago

10.1038/srep35151

Protein N-glycosylation and N-glycan trimming are required for postembryonic development of the pest beetle Tribolium castaneum
Cited by: 39
Author(s): Tomasz Walski, Els J. M. Van Damme, Nicolas Smargiasso, Olivier Christiaens, Edwin De Pauw, Guy Smagghe
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-017-00043-9

Reference genes for gene expression studies in the mouse heart
Cited by: 43
Author(s): Adrián Ruiz‐Villalba, Andrea Mattiotti, Quinn D. Gunst, Sara Cano-Ballesteros, Maurice J.B. van den Hoff, Jan M. Ruijter
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-017-02243-9

Low-cesium rice: mutation in OsSOS2 reduces radiocesium in rice grains
Cited by: 24
Author(s): Shinya Ishikawa, Shigenobu Hayashi, Tadashi Abe, Masato Igura, Masato Kuramata, Hachidai Tanikawa, Manaka Iino, Takashi Saito, Yuji Ono, Tetsuya Ishikawa, Shigefumi Fujimura, Akitoshi Goto, Hiroki Takagi
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-03728-3

Combination of RAD001 (everolimus) and docetaxel reduces prostate and breast cancer cell VEGF production and tumour vascularisation independently of sphingosine-kinase-1
Cited by: 23
Author(s): Heba Alshaker, Qi Wang, Torsten Böhler, Robert Mills, Mathias Winkler, Tawfiq Arafat, Yoshiaki Kawano, Dmitri Pchejetski
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-06527-y

Downregulation of ALAS1 by nicarbazin treatment underlies the reduced synthesis of protoporphyrin IX in shell gland of laying hens
Cited by: 17
Author(s): Sami Samiullah, Juliet R. Roberts, Shu‐Biao Wu
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-09292-0

Impact of varying social experiences during life history on behaviour, gene expression, and vasopressin receptor gene methylation in mice
Cited by: 21
Author(s): Carina Bodden, Daniël L.A. van den Hove, Klaus‐Peter Lesch, Norbert Sachser
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-017-14695-0

WRKY43 regulates polyunsaturated fatty acid content and seed germination under unfavourable growth conditions
Cited by: 16
Author(s): Katja Geilen, Mareike Heilmann, Stefan Hillmer, Maik Böhmer
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-018-19680-9

Selection and validation of reference genes for qRT-PCR analysis of gene expression in Microsporum canis growing under different adhesion-inducing conditions
Cited by: 13
Author(s): Anita Ciesielska, Paweł Stączek
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-018-21723-0

Identification of stable reference genes for quantitative PCR in koalas
Cited by: 26
Author(s): Nishat Sarker, Jessica Fabijan, Richard D. Emes, Farhid Hemmatzadeh, J. Meers, Joanna Moreton, Helen Owen, Jennifer M. Seddon, G. C. Simmons, Natasha Speight, Darren J. Trott, Lucy Woolford, Rachael Tarlinton
Software Mentions: 1
Published: over 6 years ago

10.18632/oncotarget.13115

Everolimus (RAD001) sensitizes prostate cancer cells to docetaxel by down-regulation of HIF-1α and sphingosine kinase 1
Cited by: 30
Author(s): Heba Alshaker, Qi Wang, Yoshiaki Kawano, Tawfiq Arafat, Torsten Böhler, Mathias Winkler, Christopher S. Cooper, Dmitri Pchejetski
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-018-25389-6

Expressed repetitive elements are broadly applicable reference targets for normalization of reverse transcription-qPCR data in mice
Cited by: 10
Author(s): Marjolijn Renard, Suzanne Vanhauwaert, Marine Vanhomwegen, Ali Rihani, Niels Vandamme, Steven Goossens, Geert Berx, Pieter Van Vlierberghe, Jody J. Haigh, Bieke Decaesteker, Jolien Van Laere, Irina Lambertz, Franki Speleman, Jo Vandesompele, Andy Willaert
Software Mentions: 1
Published: over 6 years ago

10.18632/oncotarget.24012

MiR-153 regulates expression of hypoxia-inducible factor-1α in refractory epilepsy
Cited by: 18
Author(s): Guo-Hua Gong, Feng-Mao An, Yu Wang, Mingzhe Bian, Di Wang, Cheng‐Xi Wei
Software Mentions: 1
Published: almost 7 years ago

10.1186/s12866-015-0599-x

Oxacillin sensitization of methicillin-resistant Staphylococcus aureus and methicillin-resistant Staphylococcus pseudintermedius by antisense peptide nucleic acids in vitro
Cited by: 25
Author(s): Shan Goh, Anette Loeffler, D. H. Lloyd, Sean P. Nair, Liam Good
Software Mentions: 1
Published: almost 9 years ago

10.1186/s13023-014-0209-2

Extensive clinical, hormonal and genetic screening in a large consecutive series of 46,XY neonates and infants with atypical sexual development
Cited by: 42
Author(s): Dorien Baetens, Wilhelm Mladenov, Barbara Delle Chiaie, Björn Menten, An Desloovere, Violeta Iotova, Bert Callewaert, Erik Van Laecke, Piet Hoebeke, Elfride De Baere
Software Mentions: 1
Published: almost 10 years ago

10.1186/s12896-020-00641-y

Synergistic interaction of hTGF-β3 with hBMP-6 promotes articular cartilage formation in chitosan scaffolds with hADSCs: implications for regenerative medicine
Cited by: 9
Author(s): Yijiang Huang, Daniel Seitz, Cheng Yan, Peter E. Müller, Volkmar Jansson, Roland M. Klar
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-020-61739-z

Selection of reference genes for normalization of RT-qPCR data in gene expression studies in Anthonomus eugenii Cano (Coleoptera: Curculionidae)
Cited by: 20
Author(s): Daniele H. Pinheiro, Blair D. Siegfried
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-64663-4

Selection of Endogenous Control Reference Genes for Studies on Type 1 or Type 2 Endometrial Cancer
Cited by: 14
Author(s): Thangesweran Ayakannu, Anthony H. Taylor, Justin C. Konje
Software Mentions: 1
Published: over 4 years ago

10.1186/s12915-016-0323-9

Angiopoietin 2 signaling plays a critical role in neural crest cell migration
Cited by: 11
Author(s): Mary Cathleen McKinney, Rebecca McLennan, Paul M. Kulesa
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-021-90488-w

The carbon source-dependent pattern of antimicrobial activity and gene expression in Pseudomonas donghuensis P482
Cited by: 11
Author(s): Marta Matuszewska, Tomasz Maciąg, Magdalena Rajewska, Aldona Wierzbicka, Sylwia Jafra
Software Mentions: 1
Published: over 3 years ago

10.1007/s00277-018-3356-z

Sex-dependent association of circulating sex steroids and pituitary hormones with treatment-free survival in chronic lymphocytic leukemia patients
Cited by: 11
Author(s): Éric P. Allain, Karin Venzl, Patrick Caron, Véronique Turcotte, David Simonyan, Michaela Gruber, Trang Le, Éric Lévesque, Chantal Guillemette, Katrina Vanura
Software Mentions: 1
Published: over 6 years ago

10.1186/s12986-017-0191-5

Supramolecular structure of dietary fat in early life modulates expression of markers for mitochondrial content and capacity in adipose tissue of adult mice
Cited by: 11
Author(s): Andrea Kodde, Eline M. van der Beek, Esther Phielix, Eefje Engels, Lidewij Schipper, Annemarie Oosting
Software Mentions: 1
Published: over 7 years ago

10.1155/2020/5726947

Immortalizing Mesenchymal Stromal Cells from Aged Donors While Keeping Their Essential Features
Cited by: 10
Author(s): María Piñeiro-Ramil, Rocío Castro-Viñuelas, Clara Sanjurjo‐Rodríguez, Silvia Rodríguez-Fernández, Tamara Hermida‐Gómez, Francisco J. Blanco, Isaac Fuentes‐Boquete, Silvia Díaz‐Prado
Software Mentions: 1
Published: over 4 years ago

10.1155/2015/401851

Expression of Intratumoral IGF-II Is Regulated by the Gene Imprinting Status in Triple Negative Breast Cancer from Vietnamese Patients
Cited by: 2
Author(s): Vinodh Kumar Radhakrishnan, Lorraine Christine Hernandez, Kendra Anderson, Qianwei Tan, Marino De León, Daisy De León
Software Mentions: 1
Published: almost 10 years ago

10.1007/s00109-020-01916-9

Microglial-specific depletion of TAK1 is neuroprotective in the acute phase after ischemic stroke
Cited by: 22
Author(s): Thomas Zeyen, Rozina Noristani, Shahin Habib, Ole Heinisch, Alexander Slowik, Michael Huber, Jörg B. Schulz, Arno Reich, Pardes Habib
Software Mentions: 1
Published: over 4 years ago

10.1186/1750-2187-9-8

Seminal plasma induces the expression of IL-1α in normal and neoplastic cervical cells via EP2/EGFR/ PI3K/AKT pathway
Cited by: 11
Author(s): Anthonio Oladele Adefuye, Kurt J. Sales, Arieh A. Katz
Software Mentions: 1
Published: over 10 years ago

10.3390/ijms151121401

Nicotinic Acid Increases Adiponectin Secretion from Differentiated Bovine Preadipocytes through G-Protein Coupled Receptor Signaling
Cited by: 31
Author(s): Christina Kopp, Afshin Hosseini, Shiva P. Singh, Petra Regenhard, Hamed Khalilvandi-Behroozyar, H. Sauerwein, M. Mielenz
Software Mentions: 1
Published: almost 10 years ago

10.3390/ijms19030846

How Tyramine β-Hydroxylase Controls the Production of Octopamine, Modulating the Mobility of Beetles
Cited by: 9
Author(s): Li Xu, Hong‐Bo Jiang, Xiaofeng Chen, Ying Xiong, Xue‐Ping Lu, Yu-Xia Pei, Guy Smagghe, Jinjun Wang
Software Mentions: 1
Published: over 6 years ago

10.3390/molecules24213863

Insights into Lignan Composition and Biosynthesis in Stinging Nettle (Urtica dioica L.)
Cited by: 8
Author(s): Xuenan Xuan, Cédric Guignard, Jenny Renaut, Jean-François Hausman, Edoardo Gatti, S. Predieri, Gea Guerriero
Software Mentions: 1
Published: about 5 years ago

10.1007/s12035-017-0492-8

The Development of Translational Biomarkers as a Tool for Improving the Understanding, Diagnosis and Treatment of Chronic Neuropathic Pain
Cited by: 11
Author(s): David Buckley, Elaine M. Jennings, Nikita N. Burke, M. Roche, Veronica McInerney, Jonathan D. Wren, David P. Finn, Patrick McHugh
Software Mentions: 1
Published: over 7 years ago