Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: pytest
https://packages.ecosyste.ms/registries/pypi.org/packages/pytest
pytest: simple powerful testing with Python
165 versions
Latest release: about 1 year ago
17,685 dependent packages
96,030,877 downloads last month
Papers Mentioning pytest 16
10.1186/s13321-020-00455-2
spyrmsd: symmetry-corrected RMSD calculations in PythonCited by: 23
Author(s): Rocco Meli, Philip C. Biggin
Software Mentions: 13
Published: about 4 years ago
10.1007/s11306-018-1356-6
A Python library for FAIRer access and deposition to the Metabolomics Workbench Data RepositoryCited by: 8
Author(s): Andrey Smelter, Hunter N. B. Moseley
Software Mentions: 9
Published: over 6 years ago
10.3389/fninf.2018.00016
Experimental Directory Structure (Exdir): An Alternative to HDF5 Without Introducing a New File FormatCited by: 14
Author(s): Svenn-Arne Dragly, Milad Hobbi Mobarhan, Mikkel Elle Lepperød, Simen Tennøe, Marianne Fyhn, Torkel Hafting, Anders Malthe‐Sørenssen
Software Mentions: 7
Published: over 6 years ago
10.1371/journal.pcbi.1008551
DEER-PREdict: Software for efficient calculation of spin-labeling EPR and NMR data from conformational ensemblesCited by: 39
Author(s): Giulio Tesei, João M. Martins, Micha B. A. Kunze, Yong Wang, Ramón Crehuet, Kresten Lindorff‐Larsen
Software Mentions: 7
Published: almost 4 years ago
10.1186/s13321-021-00536-w
Learning protein-ligand binding affinity with atomic environment vectorsCited by: 21
Author(s): Rocco Meli, Andrew Anighoro, Michael J. Bodkin, Garrett M. Morris, Philip C. Biggin
Software Mentions: 6
Published: about 3 years ago
10.7717/peerj.6562
Lightweight data management with dtoolCited by: 4
Author(s): Tjelvar S. G. Olsson, Matthew Hartley
Software Mentions: 5
Published: over 5 years ago
10.3758/s13428-018-01193-y
PsychoPy2: Experiments in behavior made easyCited by: 1,852
Author(s): Jonathan W. Peirce, Jeremy Gray, Sol Simpson, Michael R. MacAskill, Richard Höchenberger, Hiroyuki Sogo, Erik K. Kastman, Jonas Kristoffer Lindeløv
Software Mentions: 4
Published: almost 6 years ago
10.3389/fnins.2015.00380
Benchmarking neuromorphic systems with NengoCited by: 0
Author(s): Trevor Bekolay, Terrence C. Stewart, Chris Eliasmith
Software Mentions: 4
Published: about 9 years ago
10.1200/CCI.19.00127
CIViCpy: A Python Software Development and Analysis Toolkit for the CIViC KnowledgebaseCited by: 10
Author(s): Alex H. Wagner, Susanna Kiwala, Adam Coffman, Joshua F. McMichael, Kelsy C. Cotto, T. Brian Mooney, Erica K. Barnell, Kilannin Krysiak, Arpad Danos, Jason Walker, Obi L. Griffith
Software Mentions: 4
Published: about 4 years ago
10.1371/journal.pcbi.1009146
OpenABM-Covid19—An agent-based model for non-pharmaceutical interventions against COVID-19 including contact tracingCited by: 94
Author(s): Robert Hinch, William J. M. Probert, Anel Nurtay, Michaela Kendall, Chris Wymant, Matthew Hall, Katrina A. Lythgoe, Ana Bulas Cruz, Lele Zhao, Andrea Stewart, Luca Ferretti, Daniel Montero, James R. Warren, Nicole Mather, Matthew Abueg, Neo Wu, Olivier Legat, Katie Bentley, Thomas Mead, Kelvin Van-Vuuren, Dylan Feldner-Busztin, Tommaso Ristori, Anthony Finkelstein, David Bonsall, Lucie Abeler-Dörner, Christophe Fraser
Software Mentions: 3
Published: over 3 years ago
10.1371/journal.pcbi.1009301
PopART-IBM, a highly efficient stochastic individual-based simulation model of generalised HIV epidemics developed in the context of the HPTN 071 (PopART) trialCited by: 4
Author(s): Michael Pickles, Anne Cori, William J. M. Probert, Rafael Sauter, Robert Hinch, Sarah Fidler, Helen Ayles, Peter Böck, Deborah Donnell, Ethan Wilson, Estelle Piwowar‐Manning, Sian Floyd, Richard Hayes, Christophe Fraser, Hptn Study Team
Software Mentions: 3
Published: about 3 years ago
10.1093/gigascience/giaa133
Fractional ridge regression: a fast, interpretable reparameterization of ridge regressionCited by: 22
Author(s): Ariel Rokem, Kendrick Kay
Software Mentions: 3
Published: almost 4 years ago
10.3390/s19204455
A Role-Based Access Control Model in Modbus SCADA Systems. A Centralized Model ApproachCited by: 28
Author(s): Santiago Figueroa-Lorenzo, Javier Añorga, Saioa Arrizabalaga
Software Mentions: 2
Published: about 5 years ago
10.3389/fnhum.2021.675433
Diffusional Kurtosis Imaging in the Diffusion Imaging in Python ProjectCited by: 19
Author(s): Rafael Neto Henriques, Marta Correia, Maurizio Marrale, Elizabeth Huber, John Kruper, Serge Koudoro, Jason D. Yeatman, Eleftherios Garyfallidis, Ariel Rokem
Software Mentions: 2
Published: over 3 years ago
10.1038/s41597-020-0445-3
A global database of Holocene paleotemperature recordsCited by: 93
Author(s): Darrell S. Kaufman, Nicholas P. McKay, Cody Routson, Michael P. Erb, Basil Davis, Oliver Heiri, Samuel L. Jaccard, Jessica E. Tierney, Christoph Dätwyler, Yarrow Axford, Thomas Van Brussel, Olivier Cartapanis, Brian M. Chase, Andria Dawson, Anne de Vernal, Stefan Engels, Lukas Jonkers, Jeremiah Marsicek, Paola Moffa-Sánchez, C. Morrill, Anaïs Orsi, Kira Rehfeld, Krystyna M. Saunders, Philipp S. Sommer, Elizabeth K. Thomas, Marcela Sandra Tonello, Mónika Tóth, Richard S. Vachula, Andrei A. Andreev, Sébastien Bertrand, Boris K. Biskaborn, Manuel Bringué, Stephen J. Brooks, Magaly Caniupán, Manuel Chevalier, Les C. Cwynar, Julien Emile‐Geay, John M. Fegyveresi, Angelica Feurdean, Walter Finsinger, M.‐C. Fortin, Louise Foster, Mathew Fox, Konrad Gajewski, Martín Grosjean, Sonja Hausmann, Markus Heinrichs, Naomi Holmes, Boris P. Ilyashuk, Elena A. Ilyashuk, Steve Juggins, Deborah Khider, Karin A. Koinig, Peter G. Langdon, Isabelle Larocque‐Tobler, Jianyong Li, André F. Lotter, Tomi P. Luoto, Anson W. Mackay, Enikő Magyari, S. B. Malevich, Bryan G. Mark, Julieta Massaferro, Vincent Montade, Larisa Nazarova, Elena Novenko, Petr Pařil, Emma J. Pearson, Matthew Peros, Reinhard Pienitz, Mateusz Płóciennik, David F. Porinchu, Aaron P. Potito, Andrew Rees, Scott A. Reinemann, Roberts Sj, Nicolas Rolland, J. Sakari Salonen, Angela Self, Heikki Seppä, Shyhrete Shala, Jeannine Marie St-Jacques, Barbara Stenni, Liudmila Syrykh, Pol Tarrats, Karen Taylor, Valerie van den Bos, Gaute Velle, Eugene R. Wahl, Ian R. Walker, Janet M. Wilmshurst, Enlou Zhang, Snezhana Zhilich
Software Mentions: 1
Published: over 4 years ago
10.5195/jmla.2021.1105
Updating search strategies for literature reviews with OUR2D2: an open-source computer applicationCited by: 1
Author(s): Abby M. Lohr, Noah Van Gorden, Deborah Jean McClelland, Ellen Dubinsky, Lynn B. Gerald, Ada M. Wilkinson-Lee, Scott C. Carvajal
Software Mentions: 1
Published: over 3 years ago