Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: pyscenic
https://packages.ecosyste.ms/registries/pypi.org/packages/pyscenic
Python implementation of the SCENIC pipeline for transcription factor inference from single-cell transcriptomics experiments.
63 versions
Latest release: about 2 years ago
3 dependent packages
1,339 downloads last month
Papers Mentioning pyscenic 2
10.1186/s12915-019-0709-6
Single-cell reconstruction of differentiation trajectory reveals a critical role of ETS1 in human cardiac lineage commitmentCited by: 31
Author(s): Hang Ruan, Yingnan Liao, Zongna Ren, Lin Mao, Fang Yao, Yu Peng, Youqiong Ye, Zhao Zhang, Shengli Li, Hanshi Xu, Jiewei Liu, Lixia Diao, Bingying Zhou, Leng Han, Li Wang
Software Mentions: 10
Published: about 5 years ago
10.1016/j.celrep.2021.109698
Transitions in lineage specification and gene regulatory networks in hematopoietic stem/progenitor cells over human developmentCited by: 33
Author(s): Anindita Roy, Guanlin Wang, Deena Iskander, Sorcha O’Byrne, Natalina E. Elliott, Jennifer O’Sullivan, Gemma Buck, Elisabeth F. Heuston, Wei Wen, Alba Rodríguez-Meira, Peng Hua, Anastasios Karadimitris, Adam J. Mead, David M. Bodine, Irene Roberts, Bethan Psaila, Supat Thongjuea
Software Mentions: 9
Published: about 3 years ago