Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: prism
https://packages.ecosyste.ms/registries/pypi.org/packages/prism
PRISM: An alternative to MCMC for rapid analysis of models
14 versions
Latest release: almost 4 years ago
183 downloads last month
Papers Mentioning prism 301
10.7717/peerj.4278
Forecasting biodiversity in breeding birds using best practicesCited by: 37
Author(s): David J. Harris, Shawn D. Taylor, Ethan P. White
Software Mentions: 21
Published: almost 7 years ago
10.1186/s13059-021-02360-9
Role of epigenetics in unicellular to multicellular transition in DictyosteliumCited by: 8
Author(s): Simon Yuan Wang, Elizabeth A. Pollina, I‐Hao Wang, Lindsay K. Pino, Henry L. Bushnell, Ken Takashima, Colette Fritsche, George Sabin, Benjamin A. Garcia, Paul L. Greer, Eric Lieberman Greer
Software Mentions: 10
Published: over 3 years ago
10.3390/v13091811
Integrating Spatiotemporal Epidemiology, Eco-Phylogenetics, and Distributional Ecology to Assess West Nile Disease Risk in HorsesCited by: 2
Author(s): John Humphreys, Angela M. Pelzel‐McCluskey, Lee W. Cohnstaedt, Bethany L. McGregor, Kathryn A. Hanley, A. Hudson, Katherine I. Young, Dannele E. Peck, Luis L. Rodrı́guez, Debra P. C. Peters
Software Mentions: 7
Published: about 3 years ago
10.1002/1878-0261.12911
LncRNA NKX2‐1‐AS1 promotes tumor progression and angiogenesis via upregulation of SERPINE1 expression and activation of the VEGFR‐2 signaling pathway in gastric cancerCited by: 39
Author(s): Fei Teng, Ju‐Xiang Zhang, Yi Chen, Xiaodong Shen, Chang Su, Yanjiao Guo, Pu‐Hua Wang, Chencheng Shi, Ming Lei, Yiou Cao, Shao‐Qun Liu
Software Mentions: 7
Published: almost 4 years ago
10.1002/1878-0261.12968
Phosphorylation of the androgen receptor at Ser81 is co‐sustained by CDK1 and CDK9 and leads to AR‐mediated transactivation in prostate cancerCited by: 14
Author(s): Xintao Gao, Jintai Liang, LiYang Wang, Zhaoyang Zhang, Peipei Yuan, Jiaxin Wang, Youhe Gao, Fen Ma, Carla Calagua, Huihui Ye, Olga Voznesensky, Shaogang Wang, Tao Wang, Jihong Liu, Shaoyong Chen, Xiaohui Liu
Software Mentions: 6
Published: over 3 years ago
10.1002/1878-0261.12385
Genome‐wide identification of a novel mi <scp>RNA</scp> ‐based signature to predict recurrence in patients with gastric cancerCited by: 26
Author(s): Yongmei Yang, Ailin Qu, Rui Zhao, Mengmeng Hua, Xin Zhang, Zhaogang Dong, Guixi Zheng, Hongwei Pan, Hongchun Wang, Xiaoyun Yang, Yi Zhang
Software Mentions: 6
Published: about 6 years ago
10.1002/1878-0261.12965
The ZEB2‐dependent EMT transcriptional programme drives therapy resistance by activating nucleotide excision repair genes <i>ERCC1</i> and <i>ERCC4</i> in colorectal cancerCited by: 14
Author(s): Rahul Sreekumar, Hajir AlSaihati, Muhammad Emaduddin, Karwan A. Moutasim, Massimiliano Mellone, Ashish Patel, Seval Kılıç, Metin Çetįn, Sule Erdemir, Marta Salgado Navio, Maria A. Lopez, Nathan Curtis, Tamer Yağcı, John Primrose, Brendan D. Price, Geert Berx, Gareth J. Thomas, Eugene Tulchinsky, Alex H. Mirnezami, Emre Sayan
Software Mentions: 6
Published: over 3 years ago
10.1002/2211-5463.12405
Dechlorination of polychlorobiphenyl degradation metabolites by a recombinant glutathione <i>S</i> ‐transferase from <i>Acidovorax</i> sp. <scp>KKS</scp> 102Cited by: 9
Author(s): Dayyabu Shehu, Zazali Alias
Software Mentions: 5
Published: almost 6 years ago
10.1002/1878-0261.12838
SIK2 represses AKT/GSK3β/β‐catenin signaling and suppresses gastric cancer by inhibiting autophagic degradation of protein phosphatasesCited by: 17
Author(s): Xiaoman Dai, Yan‐hui Zhang, Xiaohong Lin, Xiaoxing Huang, Yi Zhang, Chaorong Xue, Wan-Nan Chen, Jian‐xin Ye, Xi Zhang Lin, Xu Lin
Software Mentions: 5
Published: about 4 years ago
10.1002/2211-5463.12600
Analysis of the role of mutations in the <scp>KMT</scp>2D histone lysine methyltransferase in bladder cancerCited by: 17
Author(s): Beichen Ding, Libin Yan, Yucong Zhang, Zhize Wang, Yangjun Zhang, Xia Ding, Zhangqun Ye, Huaxi Xu
Software Mentions: 5
Published: over 5 years ago
10.1002/1878-0261.12957
Androgen receptor signalling confers clonogenic and migratory advantages in urothelial cell carcinoma of the bladderCited by: 5
Author(s): Maria V. Luna‐Velez, Jelmer Dijkstra, Marina Augusto Heuschkel, Frank Smit, Guillaume van de Zande, Dominique Smeets, J.P. Michiel Sedelaar, Michiel Vermeulen, Gerald W. Verhaegh, Jack A. Schalken
Software Mentions: 5
Published: over 3 years ago
10.1002/1878-0261.12754
Nonsense‐mediated decay factor SMG7 sensitizes cells to TNFα‐induced apoptosis via CYLD tumor suppressor and the noncoding oncogene <i>Pvt1</i>Cited by: 8
Author(s): Limeng Yang, Vanessa A N Kraft, Susanne Pfeiffer, Juliane Merl-Pham, Xuanwen Bao, Yu An, Stefanie M. Hauck, Joel Schick
Software Mentions: 5
Published: over 4 years ago
10.3389/fcvm.2021.631650
Integrated DNA Methylation and Gene Expression Analysis Identified S100A8 and S100A9 in the Pathogenesis of ObesityCited by: 7
Author(s): Ningyuan Chen, Miao Liu, Wei Lin, Donghua Zou, Ling Huang, Jian Huang, Wei Shi, Li-Lin Li, Yu-Xing Luo, Hao Liang, Shang‐Ling Pan, Junhua Peng
Software Mentions: 5
Published: over 3 years ago
10.1002/1873-3468.13106
<scp>DDX</scp>3X <scp>RNA</scp> helicase affects breast cancer cell cycle progression by regulating expression of <scp>KLF</scp>4Cited by: 26
Author(s): Ester Cannizzaro, Andrew J. Bannister, Namshik Han, Andrej Alendar, Tony Kouzarides
Software Mentions: 5
Published: over 6 years ago
10.1002/2211-5463.12509
The amino‐terminal domain of <i>Mycobacterium tuberculosis</i> ClpB protein plays a crucial role in its substrate disaggregation activityCited by: 10
Author(s): Prajna Tripathi, Priyanka Parijat, Vaibhavi Patel, Janendra K. Batra
Software Mentions: 5
Published: about 6 years ago
10.1002/2211-5463.12543
Sulforaphane‐induced metabolomic responses with epigenetic changes in estrogen receptor positive breast cancer cellsCited by: 17
Author(s): Shuyuan Cao, Li Wang, Zhan Zhang, Feng Chen, Qian Wu, Lei Li
Software Mentions: 5
Published: about 6 years ago
10.1002/1878-0261.12779
TGF‐β‐induced IGFBP‐3 is a key paracrine factor from activated pericytes that promotes colorectal cancer cell migration and invasionCited by: 16
Author(s): Rocío Navarro, Antonio Tapia-Galisteo, Laura Martín-García, Carlos Tarin, Cesáreo Corbacho, Gonzalo Gómez‐López, Esther Sánchez‐Tirado, Susana Campuzano, Paloma Yánez‐Sedeño, Paloma Yánez‐Sedeño, Marta Compte, Luís Álvarez‐Vallina, Laura Sanz
Software Mentions: 5
Published: about 4 years ago
10.1002/1878-0261.12853
Genome‐scale CRISPR screening identifies cell cycle and protein ubiquitination processes as druggable targets for erlotinib‐resistant lung cancerCited by: 10
Author(s): Jieun Lee, Ahyoung Choi, Sung Yup Cho, Yukyung Jun, Deukchae Na, Ahra Lee, Giyong Jang, Jee Young Kwon, Jaesang Kim, Sanghyuk Lee, Charles Lee
Software Mentions: 5
Published: almost 4 years ago
10.1002/ctm2.133
Analysis of single‐cell RNAseq identifies transitional states of T cells associated with hepatocellular carcinomaCited by: 12
Author(s): Yang Yz, Fangming Liu, Weiren Liu, Mingyue Ma, Jie Gao, Yan Lu, Li-Hao Huang, Xiaoying Li, Ying–Hong Shi, Xiangdong Wang, Duojiao Wu
Software Mentions: 5
Published: over 4 years ago
10.1002/1878-0261.12616
High CD206 levels in Hodgkin lymphoma‐educated macrophages are linked to matrix‐remodeling and lymphoma disseminationCited by: 23
Author(s): Annekatrin Arlt, Frederike von Bonin, Thorsten Rehberg, Paula Pérez-Rubio, Julia C. Engelmann, Katharina Limm, Sarah Reinke, Christian Dullin, Xueni Sun, Rieke Specht, Markus Maulhardt, Franziska Linke, Gertrude Bunt, Wolfram Klapper, Martina Vockerodt, Jörg Wilting, Tobias Pukrop, Katja Dettmer, Wolfram Gronwald, Peter J. Oefner, Rainer Spang, Dieter Kube
Software Mentions: 5
Published: almost 5 years ago
10.1002/1878-0261.12694
SUMOylation modulates the LIN28A‐let‐7 signaling pathway in response to cellular stresses in cancer cellsCited by: 5
Author(s): Jinzhuo Dou, Hailong Zhang, Ran Chen, Zimei Shu, Yuanfei Han, Xian Zhao, Yanli Wang, Jian Huang, Aiwu Zhou, Jianxiu Yu
Software Mentions: 4
Published: over 4 years ago
10.1186/s13059-016-0882-7
Characterization of chromatin accessibility with a transposome hypersensitive sites sequencing (THS-seq) assayCited by: 50
Author(s): Brandon C. Sos, Ho-Lim Fung, Derek Gao, Trina Osothprarop, Amirali Kia, M.M. He, Kun Zhang
Software Mentions: 4
Published: almost 9 years ago
10.1002/1878-0261.12776
Fine‐needle aspiration as an alternative to core needle biopsy for tumour molecular profiling in precision oncology: prospective comparative study of next‐generation sequencing in cancer patients included in the SHIVA02 trialCited by: 9
Author(s): Célia Dupain, Julien Masliah‐Planchon, Céline Gu, Elodie Girard, Pierre Gestraud, Pauline du Rusquec, Édith Borcoman, Diana Bello, Francesco Ricci, Ségolène Hescot, Marie‐Paule Sablin, Patricia Tresca, Alexandre de Moura, Delphine Loirat, Maxime Frélaut, Anne Vincent‐Salomon, Charlotte Lecerf, Céline Callens, Samantha Antonio, Coralie Franck, Odette Mariani, Ivan Bièche, Maud Kamal, Christophe Le Tourneau, Vincent Servois
Software Mentions: 4
Published: about 4 years ago
10.1002/1878-0261.12364
A drug‐repositioning screen for primary pancreatic ductal adenocarcinoma cells identifies 6‐thioguanine as an effective therapeutic agent for TPMT‐low cancer cellsCited by: 15
Author(s): Inki Kim, Yong-Sung Choi, Jae Yen Song, Eun A Choi, Sojung Park, Eun Ji Lee, Je-Keun Rhee, Song Cheol Kim, Suhwan Chang
Software Mentions: 4
Published: about 6 years ago
10.1002/2211-5463.13252
Knockdown of DNA methyltransferase 1 reduces DNA methylation and alters expression patterns of cardiac genes in embryonic cardiomyocytesCited by: 4
Author(s): Xiefan Fang, Ryan Poulsen, Lu Zhao, Jingjing Wang, Scott A. Rivkees, Christopher C. Wendler
Software Mentions: 4
Published: over 3 years ago
10.1002/2211-5463.13062
Chondroitin polymerizing factor promotes breast carcinoma cell proliferation, invasion and migration and affects expression of epithelial‐mesenchymal transition‐related markersCited by: 6
Author(s): Li Yang, Hui Gong, Lei Feng, Dan Mao, Yujie Xiao, Yunqi Wang, Huang Li-zhong
Software Mentions: 4
Published: almost 4 years ago
10.1038/s41416-021-01335-8
The amino acid metabolism is essential for evading physical plasma-induced tumour cell deathCited by: 9
Author(s): Rajesh Kumar Gandhirajan, Dorothee Meyer, Sanjeev Kumar Sagwal, Klaus‐Dieter Weltmann, Thomas von Woedtke, Sander Bekeschus
Software Mentions: 4
Published: over 3 years ago
10.1111/pcmr.12568
An ongoing role for <i>Wnt</i> signaling in differentiating melanocytes in vivoCited by: 28
Author(s): Laura Vibert, Gerardo Aquino, Ines Gehring, Tatiana Subkankulova, Thomas F. Schilling, Andrea Rocco, Robert N. Kelsh
Software Mentions: 4
Published: over 7 years ago
10.1038/s41598-020-80512-w
Tumor cytotoxicity and immunogenicity of a novel V-jet neon plasma source compared to the kINPenCited by: 21
Author(s): Lea Miebach, Eric Freund, Stefan Horn, Felix Nießner, Sanjeev Kumar Sagwal, Thomas von Woedtke, Steffen Emmert, Klaus‐Dieter Weltmann, Ramona Clemen, Anke Schmidt, Torsten Gerling, Sander Bekeschus
Software Mentions: 4
Published: almost 4 years ago
10.1155/2020/7061972
Electroacupuncture Alleviates Experimental Chronic Inflammatory Pain by Inhibiting Calcium Voltage-Gated Channel-Mediated InflammationCited by: 5
Author(s): Jie Zhou, Jiang Ying, Ruijie Ma, Hongyun Song, Qin Chen, Yueyang Chai, Yi Liang, You Zhou, Jianqiao Fang
Software Mentions: 4
Published: almost 5 years ago
10.4269/ajtmh.19-0244
Environmental Determinants of Aedes albopictus Abundance at a Northern Limit of Its Range in the United StatesCited by: 16
Author(s): Pallavi A Kache, Gillian Eastwood, Kaitlin Collins-Palmer, Marly B. Katz, Richard C. Falco, Waheed I. Bajwa, Philip M. Armstrong, Theodore G. Andreadis, Maria A. Diuk‐Wasser
Software Mentions: 4
Published: almost 5 years ago
10.1002/advs.201903438
Medical Gas Plasma Jet Technology Targets Murine Melanoma in an Immunogenic FashionCited by: 75
Author(s): Sander Bekeschus, Ramona Clemen, Felix Nießner, Sanjeev Kumar Sagwal, Eric Freund, Anke Schmidt
Software Mentions: 4
Published: over 4 years ago
10.1002/1878-0261.12796
CircFNDC3B sequestrates miR‐937‐5p to derepress TIMP3 and inhibit colorectal cancer progressionCited by: 52
Author(s): Wei Zeng, Yi Liu, Wenting Li, Yang Li, Jin-Feng Zhu
Software Mentions: 4
Published: about 4 years ago
10.1002/2211-5463.13032
Delivery of a mitochondria‐targeted antioxidant from biocompatible, polymeric nanofibrous scaffoldsCited by: 7
Author(s): Yasaman Hamedani, Rayane Brinck Teixeira, Catherine Karbasiafshar, Peter Wipf, Sankha Bhowmick, M. Ruhul Abid
Software Mentions: 4
Published: almost 4 years ago
10.1111/jth.13613
Clustering of glycoprotein VI (GPVI) dimers upon adhesion to collagen as a mechanism to regulate GPVI signaling in plateletsCited by: 82
Author(s): Natalie S. Poulter, Alice Y. Pollitt, Dylan M. Owen, Elizabeth E. Gardiner, Robert K. Andrews, Hiroyuki Shimizu, Daisuke Ishikawa, Dominique Bihan, Richard W. Farndale, Masaaki Moroi, Steve P. Watson, Stéphanie Jung
Software Mentions: 4
Published: over 7 years ago
10.1371/journal.pone.0032453
Astrocyte-Specific Expression Patterns Associated with the PDGF-Induced Glioma MicroenvironmentCited by: 66
Author(s): Amanda Katz, Nduka Amankulor, Kenneth L. Pitter, Karim Y. Helmy, Massimo Squatrito, Eric C. Holland
Software Mentions: 4
Published: over 12 years ago
10.1111/jne.12920
Activation and expression of endogenous CREB‐regulated transcription coactivators (CRTC) 1, 2 and 3 in the rat adrenal glandCited by: 3
Author(s): Lorna Smith, Zidong Zhao, Jamie J. Walker, Stafford L. Lightman, Francesca Spiga
Software Mentions: 4
Published: almost 4 years ago
10.1002/2211-5463.12484
Induction of <i>ubiquitin C</i> (<i><scp>UBC</scp></i>) gene transcription is mediated by <scp>HSF</scp>1: role of proteotoxic and oxidative stressCited by: 22
Author(s): Marzia Bianchi, Rita Crinelli, Vanessa Arbore, Mauro Magnani
Software Mentions: 4
Published: over 6 years ago
10.1002/2211-5463.12521
In silico identification and biochemical characterization of the human dicarboxylate clamp TPR protein interaction networkCited by: 4
Author(s): Alexandra Bernadotte, Rajnish Kumar, Bengt Winblad, Pavel F. Pavlov
Software Mentions: 4
Published: about 6 years ago
10.1111/acel.12352
Eicosapentaenoic acid but not docosahexaenoic acid restores skeletal muscle mitochondrial oxidative capacity in old miceCited by: 50
Author(s): Matthew L. Johnson, Antigoni Z. Lalia, Surendra Dasari, Maximilian Pallauf, Mark Fitch, Marc K. Hellerstein, Ian R. Lanza
Software Mentions: 4
Published: over 9 years ago
10.3390/biom10040527
Aspirin: A Suicide Inhibitor of Carbonic Anhydrase IICited by: 10
Author(s): Jacob T. Andring, Jacob Combs, Robert McKenna
Software Mentions: 4
Published: over 4 years ago
10.1038/cr.2017.135
Endothelial cell-derived GABA signaling modulates neuronal migration and postnatal behaviorCited by: 66
Author(s): Suyan Li, Peeyush Kumar T, Sampada Joshee, Timo Kirschstein, Sivan Subburaju, Jahan S. Khalili, Jonas Kloepper, Chuang Du, Abdallah Elkhal, Gábor Szabó, Rakesh K. Jain, Rüdiger Köhling, Anju Vasudevan
Software Mentions: 4
Published: about 7 years ago
10.1080/15476286.2019.1621625
NET-prism enables RNA polymerase-dedicated transcriptional interrogation at nucleotide resolutionCited by: 5
Author(s): Constantine Mylonas, Peter Tessarz
Software Mentions: 4
Published: over 5 years ago
10.1002/2211-5463.12942
Chemokine‐like factor 1 (CKLF1) aggravates neointimal hyperplasia through activating the NF‐κB /VCAM‐1 pathwayCited by: 3
Author(s): Xinnong Liu, Chengjia Qu, Yongbao Zhang, Jie Fang, Lequn Teng, Rujiao Zhang, Xiangyu Zhang, Chenyang Shen
Software Mentions: 3
Published: over 4 years ago
10.1111/acel.12256
Depletion of Rictor, an essential protein component of m <scp>TORC</scp> 2, decreases male lifespanCited by: 97
Author(s): Dudley W. Lamming, Maria M. Mihaylova, Pekka Katajisto, Emma L. Baar, Ömer H. Yılmaz, Amanda W. Hutchins, Yetiş Gültekin, Rachel Gaither, David M. Sabatini
Software Mentions: 3
Published: over 10 years ago
10.1002/2211-5463.12197
miR-127-5p negatively regulates enterovirus 71 replication by directly targeting SCARB2Cited by: 10
Author(s): Cheng Feng, Yuxuan Fu, Deyan Chen, Huanru Wang, Airong Su, Li Zhang, Liang Chang, Nan Zheng, Zhiwei Wu
Software Mentions: 3
Published: over 7 years ago
10.1002/2211-5463.12124
Drosophila ataxin‐2 gene encodes two differentially expressed isoforms and its function in larval fat body is crucial for development of peripheral tissuesCited by: 3
Author(s): Murilo Carlos Bizam Vianna, Deise Cristina Poleto, Paula Fernanda Gomes, Valéria Valente, Maria Luísa Paçó-Larson
Software Mentions: 3
Published: about 8 years ago
10.1002/2211-5463.12371
Tip60 is associated with resistance to X-ray irradiation in prostate cancerCited by: 8
Author(s): Xin Xie, Zifeng Xu, Chenghe Wang, Fang Chen, Juping Zhao, Liang Xu, Xiaoqiang Qian, Jun Dai, Fenyong Sun, Danfeng Xu, Wei He
Software Mentions: 3
Published: almost 7 years ago
10.1186/s12865-019-0294-z
Immunoglobulin G responses against falciparum malaria specific antigens are higher in children with homozygous sickle cell trait than those with normal hemoglobinCited by: 4
Author(s): George M. Bwire, Mtebe Majigo, Robert Makalla, Lillian Nkinda, Akili Mawazo, Mucho Mizinduko, Julie Makani
Software Mentions: 3
Published: over 5 years ago
10.1002/1878-0261.12346
Modulating <scp>ATP</scp> binding cassette transporters in papillary renal cell carcinoma type 2 enhances its response to targeted molecular therapyCited by: 11
Author(s): Rola Saleeb, Mina Farag, Zsuzsanna Lichner, Fadi Brimo, Jenni Bartlett, Georg A. Bjarnason, Antonio Finelli, Fabio Rontondo, Michelle Downes, George M. Yousef
Software Mentions: 3
Published: about 6 years ago
10.1002/1878-0261.12456
Clinical factors associated with circulating tumor <scp>DNA</scp> (ct <scp>DNA</scp> ) in primary breast cancerCited by: 29
Author(s): Yidong Zhou, Yaping Xu, Yuhua Gong, Yanyan Zhang, Yaping Lu, Changjun Wang, Ru Yao, Peng Li, Yanfang Guan, Jiayin Wang, Xuefeng Xia, Ling Yang, Xin Yi, Qiang Sun
Software Mentions: 3
Published: almost 6 years ago
10.1002/2211-5463.12830
Hypoxia potentiates the capacity of melanoma cells to evade cisplatin and doxorubicin cytotoxicity via glycolytic shiftCited by: 6
Author(s): Ming Zhuo, Falih M. Gorgun, Douglas S. Tyler, Ella W. Englander
Software Mentions: 3
Published: over 4 years ago
10.1002/2211-5463.13098
Uptake of circulating extracellular vesicles from rectal cancer patients and differential responses by human monocyte culturesCited by: 3
Author(s): Tonje Bjørnetrø, Lilly Alice Steffensen, Beate Vestad, Berit Sletbakk Brusletto, Ole Kristoffer Olstad, Anne-Marie Siebke Trøseid, Hans Christian Dalsbotten Aass, Kari Bente Foss Haug, Alicia Llorente, Stig Ove Bøe, Anna Lång, Rampradeep Samiappan, Kathrine Røe Redalen, Reidun Øvstebø, Anne Hansen Ree
Software Mentions: 3
Published: almost 4 years ago
10.1002/1878-0261.12734
The MSP‐RON axis stimulates cancer cell growth in models of triple negative breast cancerCited by: 10
Author(s): Rhona Millar, Anna Kilbey, Sarah-Jane Remak, Tesa Severson, Sandeep Dhayade, Emma Sandilands, Kyla Foster, David M. Bryant, Karen Blyth, Seth B. Coffelt
Software Mentions: 3
Published: over 4 years ago
10.1002/1878-0261.12566
TRPM4 is highly expressed in human colorectal tumor buds and contributes to proliferation, cell cycle, and invasion of colorectal cancer cellsCited by: 30
Author(s): Sven Kappel, Paulina Stokłosa, Barbara Hauert, Daniela Ross‐Kaschitza, Anna Borgström, Roland Baur, José A. Galván, Inti Zlobec, Christine Peinelt
Software Mentions: 3
Published: about 5 years ago
10.1002/1878-0261.12757
Genome‐wide profiling of circulating tumor DNA depicts landscape of copy number alterations in pancreatic cancer with liver metastasisCited by: 11
Author(s): Wei Tao, Jian Zhang, Jin Li, Qi Chen, Xiaoqin Zhi, Wei Tao, Jingjiao Ma, Jiaqi Yang, Yiting Lou, Tao Ma, Xiang Li, Qi Zhang, Wei Chen, Risheng Que, Shunliang Gao, Xueli Bai, Tingbo Liang
Software Mentions: 3
Published: over 4 years ago
10.1002/2211-5463.12634
Blueberry juice protects osteocytes and bone precursor cells against oxidative stress partly through <scp>SIRT</scp> 1Cited by: 16
Author(s): Vladana Domazetovic, Gemma Marcucci, Federica Pierucci, Gennaro Bruno, Lorenzo Di Cesare Mannelli, Carla Ghelardini, Maria Luisa Brandi, Teresa Iantomasi, Elisabetta Meacci, Massimo Vincenzini
Software Mentions: 3
Published: over 5 years ago
10.1002/2211-5463.13212
C188‐9 reduces TGF‐β1‐induced fibroblast activation and alleviates ISO‐induced cardiac fibrosis in miceCited by: 3
Author(s): Jiao Liu, Yuxuan Jin, Bei Wang, Jinying Zhang, Shengkai Zuo
Software Mentions: 3
Published: over 3 years ago
10.1002/1878-0261.12429
<scp>FAM</scp> 134B induces tumorigenesis and epithelial‐to‐mesenchymal transition via Akt signaling in hepatocellular carcinomaCited by: 21
Author(s): Zhaoqi Zhang, Cheqing Jin, Wanqiu Huang, Ning Deng, Qiumeng Liu, Chao Wang, Long Zhang, Li Ren, Liang Chu, Huifang Liang, Haining Fan, Bi‐xiang Zhang, Xiaoping Chen
Software Mentions: 3
Published: almost 6 years ago
10.1002/1878-0261.12384
Metformin blocks <scp>MYC</scp> protein synthesis in colorectal cancer via m<scp>TOR</scp>‐4<scp>EBP</scp>‐e<scp>IF</scp>4E and MNK1‐e<scp>IF</scp>4G‐e<scp>IF</scp>4E signalingCited by: 31
Author(s): Peng Shen, Lucas C. Reineke, Erik Knutsen, Meng Chen, Martin Pichler, Hui Ling, George A. Calin
Software Mentions: 3
Published: about 6 years ago
10.1002/2211-5463.13014
The sodium–glucose cotransporter 2 inhibitor tofogliflozin prevents diabetic kidney disease progression in type 2 diabetic miceCited by: 9
Author(s): Zi Li, Maki Murakoshi, Saki Ichikawa, Takeo Koshida, Eri Adachi, Chigure Suzuki, Seinosuke Ueda, Tomohito Gohda, Yusuke Suzuki
Software Mentions: 3
Published: about 4 years ago
10.1002/1878-0261.12374
Human cancer evolution in the context of a human immune system in miceCited by: 10
Author(s): Odd L. Gammelgaard, Mikkel Green Terp, Birgitte Preiss, Henrik J. Ditzel
Software Mentions: 3
Published: about 6 years ago
10.1002/2211-5463.13240
In vitro and in vivo safety studies indicate that R15, a synthetic polyarginine peptide, could safely reverse the effects of unfractionated heparinCited by: 0
Author(s): Tong Li, Meng Zhang, Xue-Ming Zhu, Hui Gan, Ruixia Gu, Zhiyong Wu, Taoyun Liu, Peng Han, Jiarui Gao, Shuang Han, Guifang Dou
Software Mentions: 3
Published: over 3 years ago
10.1002/2211-5463.12924
A mouse model of Timothy syndrome exhibits altered social competitive dominance and inhibitory neuron developmentCited by: 6
Author(s): Shin Ichiro Horigane, Yukihiro Ozawa, Jun Zhang, Hiroe Todoroki, Miao Pan, Asahi Haijima, Yuchio Yanagawa, Shuhei Ueda, Shigeo Nakamura, Masaki Kakeyama, Sayaka Takemoto-Kimura
Software Mentions: 3
Published: over 4 years ago
10.1002/2211-5463.12749
Disorder‐to‐order transition in PE–PPE proteins of <i>Mycobacterium tuberculosis</i> augments the pro‐pathogen immune responseCited by: 18
Author(s): Javeed Ahmad, Mohd Khubaib, Javaid A. Sheikh, Rita Pancsa, Saroj Kumar, Alagiri Srinivasan, M. Madan Babu, Seyed E. Hasnain, Nasreen Z. Ehtesham
Software Mentions: 3
Published: almost 5 years ago
10.1002/2211-5463.12950
Inhibition of the proteasome and proteaphagy enhances apoptosis in FLT3‐ITD‐driven acute myeloid leukemiaCited by: 4
Author(s): Rosa G. Lopez-Reyes, Grégoire Quinet, María Gonzalez-Santamarta, Clément Larrue, Jean-Emmanuel Sarry, Manuel Sánchez Rodríguez
Software Mentions: 3
Published: almost 4 years ago
10.1002/2211-5463.12690
Comparative analysis of <scp>CDR</scp>3 regions in paired human αβ <scp>CD</scp>8 T cellsCited by: 6
Author(s): Kun Yu, Jingwei Shi, Dan Lü, Qiong Yang
Software Mentions: 3
Published: over 5 years ago
10.1002/2211-5463.12937
Hyperoside ameliorates periodontitis in rats by promoting osteogenic differentiation of BMSCs via activation of the NF‐κB pathwayCited by: 10
Author(s): Tan Xu, Xiao Wu, Zhou Zhou, Yu Ye, Chaoting Yan, Nanshan Zhuge, Jinhua Yu
Software Mentions: 3
Published: over 4 years ago
10.1002/2211-5463.12603
Annexin A1 peptide and endothelial cell‐conditioned medium modulate cervical tumorigenesisCited by: 6
Author(s): Laila Toniol Cardin, Janesly Prates, Bianca Rodrigues da Cunha, Eloíza H. Tajara, Sônia Maria Oliani, Flávia Cristina Rodrigues-Lisoni
Software Mentions: 3
Published: over 5 years ago
10.1002/2211-5463.13165
METTL3 mediates bone marrow mesenchymal stem cell adipogenesis to promote chemoresistance in acute myeloid leukaemiaCited by: 20
Author(s): Zhipeng Pan, Bin Wang, Diyu Hou, Ruolan You, Xiao‐ting Wang, Wenhui Xie, Huifang Huang
Software Mentions: 3
Published: over 3 years ago
10.1002/2211-5463.12581
Differential regulation of brain‐derived neurotrophic factor (BDNF) expression in sensory neuron axons by miRNA‐206Cited by: 6
Author(s): Shiva Shrestha, Monichan Phay, Hak Hee Kim, Pedram Pouladvand, Seung Joon Lee, Soonmoon Yoo
Software Mentions: 3
Published: almost 6 years ago
10.1111/febs.14744
<i>In vivo</i> inactivation of glycosidases by conduritol B epoxide and cyclophellitol as revealed by activity‐based protein profilingCited by: 37
Author(s): C.J. Kuo, Wouter W. Kallemeijn, Lindsey T. Lelieveld, Mina Mirzaian, Iris Zoutendijk, Ayelet Vardi, Anthony H. Futerman, Annemarie H. Meijer, Herman P. Spaink, Herman S. Overkleeft, Johannes M. F. G. Aerts, Marta Artola
Software Mentions: 3
Published: almost 6 years ago
10.1111/acel.12800
FOXO are required for intervertebral disk homeostasis during aging and their deficiency promotes disk degenerationCited by: 48
Author(s): Óscar Álvarez-García, Takashi Matsuzaki, Merissa Olmer, Koichiro Miyata, Sho Mokuda, Daisuke Sakai, Koichi Masuda, Hiroshi Asahara, Martin Lotz
Software Mentions: 3
Published: over 6 years ago
10.1002/2211-5463.13207
The mitochondrial fission factor FIS1 promotes stemness of human lung cancer stem cells via mitophagyCited by: 11
Author(s): Rachel Liu, Zhiwei Sun, Ting Ye, Jingyuan Li, Bin Zeng, Qiting Zhao, Yunlong Wang, H. Rosie Xing
Software Mentions: 3
Published: over 3 years ago
10.1111/j.1460-9568.2008.06256.x
Inflammation reduces mechanical thresholds in a population of transient receptor potential channel A1‐expressing nociceptors in the ratCited by: 51
Author(s): James P. Dunham, Sara Kelly, Lucy F. Donaldson
Software Mentions: 3
Published: over 16 years ago
10.1111/ejn.13766
MAP6 interacts with Tctex1 and Ca<sub>v</sub>2.2/N-type calcium channels to regulate calcium signalling in neuronsCited by: 5
Author(s): Jacques Brocard, Fabrice Dufour, Sylvie Gory-Fauré, Christophe Arnoult, Christophe Bosc, Éric Denarier, Leticia Peris, Yasmina Saoudi, Michel De Waard, Annie Andrieux
Software Mentions: 3
Published: almost 7 years ago
10.3390/antiox9040323
Gas Plasma-Treated Prostate Cancer Cells Augment Myeloid Cell Activity and CytotoxicityCited by: 15
Author(s): Sander Bekeschus, Verena Ressel, Eric Freund, Nadine Gelbrich, Alexander Mustea, Matthias B. Stope
Software Mentions: 3
Published: over 4 years ago
10.1002/2211-5463.12939
ADAMTS7 degrades Comp to fuel BMP2‐dependent osteogenic differentiation and ameliorate oncogenic potential in osteosarcomasCited by: 5
Author(s): Chao Wang, Yunqing Chen, Hongfei Xiang, Xiaolin Wu, Qian Tang, Xuexiao Ma, Lu Zhang
Software Mentions: 3
Published: over 4 years ago
10.1002/1878-0261.12449
<scp>TARBP</scp> 2‐mediated destabilization of Nanog overcomes sorafenib resistance in hepatocellular carcinomaCited by: 22
Author(s): Hui Huang Lai, Chih Wei Li, Chih Chen Hong, Hung Yu Sun, Ching-Feng Chiu, Da-Liang Ou, Pai Sheng Chen
Software Mentions: 3
Published: over 5 years ago
10.3390/cancers12092570
Plasma Treatment Limits Human Melanoma Spheroid Growth and Metastasis Independent of the Ambient Gas CompositionCited by: 19
Author(s): Sybille Hasse, Tita Meder, Eric Freund, Thomas von Woedtke, Sander Bekeschus
Software Mentions: 3
Published: about 4 years ago
10.3390/cancers12071993
Plasma Treatment Limits Cutaneous Squamous Cell Carcinoma Development In Vitro and In VivoCited by: 23
Author(s): Gabriella Pasqual-Melo, Thiago Henrique Daniel do Nascimento, Larissa Juliani Sanches, Fernanda Paschoal Blegniski, Julya Karen Bianchi, Sanjeev Kumar Sagwal, Julia Berner, Anke Schmidt, Steffen Emmert, Klaus‐Dieter Weltmann, Thomas von Woedtke, Rajesh Kumar Gandhirajan, Alessandra Lourenço Cecchini, Sander Bekeschus
Software Mentions: 3
Published: over 4 years ago
10.1002/1878-0261.12548
RAC1 inhibition reverses cisplatin resistance in esophageal squamous cell carcinoma and induces downregulation of glycolytic enzymesCited by: 39
Author(s): Ruijie Zeng, Chunwen Zheng, Jinge Gu, Haixia Zhang, Lei Xie, Li‐Yan Xu, En‐Min Li
Software Mentions: 3
Published: over 5 years ago
10.1002/1878-0261.12686
Novel C‐terminal heat shock protein 90 inhibitors target breast cancer stem cells and block migration, self‐renewal, and epithelial–mesenchymal transitionCited by: 12
Author(s): Chitra Subramanian, Patrick T. Grogan, Wang Ton, Joseph Bazzill, Ang Zuo, Peter White, Avinaash Kalidindi, Dawn Kuszynski, Grace Wang, Brian S. J. Blagg, Mark S. Cohen
Software Mentions: 3
Published: over 4 years ago
10.1002/1878-0261.12937
Cancer‐associated fibroblast migration in non‐small cell lung cancers is modulated by increased integrin α11 expressionCited by: 19
Author(s): Moe Iwai, Miniwan Tulafu, Shinsaku Togo, Hideya Kawaji, Kotaro Kadoya, Yukiko Namba, Jin Jin, Junko Watanabe, Takahiro Okabe, Moulid Hidayat, Issei Sumiyoshi, Masayoshi Itoh, Yu Koyama, Yasuhiko Ito, Akira Orimo, Kazuya Takamochi, Shiaki Oh, Kenji Suzuki, Yoshihide Hayashizaki, Kōji Yoshida, Kazuhisa Takahashi
Software Mentions: 3
Published: over 3 years ago
10.1002/1878-0261.12592
Regulation of the MDM2‐p53 pathway by the ubiquitin ligase HERC2Cited by: 25
Author(s): Jesús García-Cano, Susana Sánchez-Tena, Joan Sala-Gaston, Agnès Figueras, Francesc Viñals, Ramón Bartrons, Francesc Ventura, José Luís Rosa
Software Mentions: 3
Published: about 5 years ago
10.1371/journal.pone.0234958
Structural and biochemical characterization of a novel thermophilic Coh01147 proteaseCited by: 9
Author(s): Hossein Tarrahimofrad, Amir Meimandipour, Sareh Arjmand, Mohammadtaghi Beigi Nassiri, Ehsan Jahangirian, Hossein Tavana, Javad Zamani, Somayyeh Rahimnahal, Saeed Aminzadeh
Software Mentions: 3
Published: over 4 years ago
10.3390/cancers13112525
Murine Macrophages Modulate Their Inflammatory Profile in Response to Gas Plasma-Inactivated Pancreatic Cancer CellsCited by: 6
Author(s): Aydar Khabipov, Eric Freund, Kim Rouven Liedtke, André Käding, Janik Riese, Julia van der Linde, Stephan Kersting, Lars-Ivo Partecke, Sander Bekeschus
Software Mentions: 3
Published: over 3 years ago
10.1002/1878-0261.12572
Factors that influence the androgen receptor cistrome in benign and malignant prostate cellsCited by: 11
Author(s): Ben T. Copeland, Juan Du, Sumanta K. Pal, Jeremy O. Jones
Software Mentions: 3
Published: about 5 years ago
10.1002/2211-5463.13147
Dapagliflozin reverses the imbalance of T helper 17 and T regulatory cells by inhibiting SGK1 in a mouse model of diabetic kidney diseaseCited by: 15
Author(s): Dan Wang, Zikun Zhang, Zekun Si, Yanlin Yang, Shuangshuang Li, Yan Xue
Software Mentions: 3
Published: over 3 years ago
10.1002/1878-0261.12683
Long noncoding RNA SNHG12 induces proliferation, migration, epithelial–mesenchymal transition, and stemness of esophageal squamous cell carcinoma cells via post‐transcriptional regulation of BMI1 and CTNNB1Cited by: 29
Author(s): Duoguang Wu, Xiaotian He, Wenjian Wang, Xueqiang Hu, Kefeng Wang, Minghui Wang
Software Mentions: 3
Published: over 4 years ago
10.3390/cancers12040845
Combination Treatment with Cold Physical Plasma and Pulsed Electric Fields Augments ROS Production and Cytotoxicity in LymphomaCited by: 26
Author(s): Christina M. Wolff, Juergen F. Kolb, Klaus‐Dieter Weltmann, Thomas von Woedtke, Sander Bekeschus
Software Mentions: 3
Published: over 4 years ago
10.1002/1878-0261.12928
Mitochondrial STAT3 regulates antioxidant gene expression through complex I‐derived NAD in triple negative breast cancerCited by: 14
Author(s): Tanaya Lahiri, Lara Brambilla, Joshua Andrade, Manor Askenazi, Beatrix Ueberheide, David E. Levy
Software Mentions: 3
Published: over 3 years ago
10.1002/2211-5463.12684
<i>S</i> ‐allyl‐ <scp>l</scp> ‐cysteine (SAC) protects hepatocytes from alcohol‐induced apoptosisCited by: 13
Author(s): Peng Chen, Mei Chen Hu, Feng Liu, Henghai Yu, Chen Chen
Software Mentions: 3
Published: over 5 years ago
10.1002/1878-0261.12100
TRPM4 regulates Akt/GSK3-β activity and enhances β-catenin signaling and cell proliferation in prostate cancer cellsCited by: 61
Author(s): Alfredo I. Sagredo, E Sagredo, Claudio Cappelli, Pablo Baéz, Rodrigo Andaur, Constanza Blanco, Julio C. Tapia, César Echeverría, Oscar Cerda, Andrés Stutzin, Felipe Simón, Katherine Marcelain, Ricardo Armisén
Software Mentions: 3
Published: almost 7 years ago
10.1111/acel.12453
Calpain inhibition rescues troponin T3 fragmentation, increases Cav1.1 <i>,</i> and enhances skeletal muscle force in aging sedentary miceCited by: 23
Author(s): Tan Zhang, Andrea M. Pereyra, Zhong Min Wang, Alexander Birbrair, Julie A. Reisz, D. Clark Files, Lina D. Purcell, Xin Feng, Marı́a Laura Messi, Han‐Zhong Feng, Joseph M. Chalovich, Jian‐Ping Jin, Cristina M. Furdui, Osvaldo Delbono
Software Mentions: 3
Published: almost 9 years ago
10.1002/1878-0261.12177
Characterization of a novel OTX2-driven stem cell program in Group 3 and Group 4 medulloblastomaCited by: 14
Author(s): Margaret Stromecki, Nazanin Tatari, Ludivine Coudière Morrison, Ravinder Kaur, Jamie Zagozewski, Gareth Palidwor, Vijay Ramaswamy, Patryk Skowron, Matthias Wölfl, Till Milde, Marc R. Del Bigio, Michael D. Taylor, Tamra E. Werbowetski-Ogilvie
Software Mentions: 3
Published: over 6 years ago
10.1111/acel.12583
Insulin-like growth factor 1 deficiency exacerbates hypertension-induced cerebral microhemorrhages in mice, mimicking the aging phenotypeCited by: 71
Author(s): Stefano Tarantini, Noa M. Valcarcel-Ares, Andriy Yabluchanskiy, Zsolt Springó, Gábor Fülöp, Nicole M. Ashpole, Tripti Gautam, Cory B. Giles, Jonathan D. Wren, William E. Sonntag, Anna Csiszár, Zoltán Ungvári
Software Mentions: 3
Published: over 7 years ago
10.1002/1878-0261.12163
Inhibition of fucosylation in human invasive ductal carcinoma reduces E‐selectin ligand expression, cell proliferation, and<scp>ERK</scp>1/2 and p38<scp>MAPK</scp>activationCited by: 44
Author(s): Mylène A. Carrascal, Mariana Silva, José S. Ramalho, Cláudia Pen, Manuela Martins, Carlota Pascoal, Constança Pais do Amaral, Isabel Serrano, Maria José Oliveira, Robert Sackstein, Paula A. Videira
Software Mentions: 3
Published: over 6 years ago
10.1002/1878-0261.12145
Regulation of the prometastatic neuregulin–<scp>MMP</scp>13 axis by<scp>SRC</scp>family kinases: therapeutic implicationsCited by: 6
Author(s): Ana Orive-Ramos, Samuel Seoane, Alberto Ocaña, Atanasio Pandiella, Juan Carlos Montero
Software Mentions: 3
Published: about 7 years ago
10.1002/1878-0261.12800
Downregulation of miR‐326 and its host gene β‐arrestin1 induces pro‐survival activity of E2F1 and promotes medulloblastoma growthCited by: 8
Author(s): Evelina Miele, Agnese Pò, Angela Mastronuzzi, Andrea Carai, Zein Mersini Besharat, Natalia Pediconi, Luana Abballe, Giuseppina Catanzaro, Claudia Sabato, Enrico De Smaele, Gianluca Canettieri, Lucia Di Marcotullio, Alessandra Vacca, Antonello Mai, Massimo Levrero, Stefan M. Pfister, Marcel Kool, Felice Giangaspero, Franco Locatelli, Elisabetta Ferretti
Software Mentions: 3
Published: almost 4 years ago