Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: panphlan
https://packages.ecosyste.ms/registries/pypi.org/packages/panphlan
PanPhlAn is a strain-level metagenomic profiling tool for identifying the gene composition and *in-vivo* transcriptional activity of individual strains in metagenomic samples. PanPhlAn’s ability for strain-tracking and functional analysis of unknown pathogens makes it an efficient tool for culture-free infectious outbreak epidemiology and microbial population studies.
2 versions
Latest release: over 4 years ago
12 downloads last month
Papers Mentioning panphlan 1
10.1186/s40168-017-0292-4
Whole metagenome profiles of particulates collected from the International Space StationCited by: 50
Author(s): Nicholas A. Be, Aram Avila-Herrera, Jonathan Allen, Nitin Kumar Singh, Aleksandra Checinska Sielaff, Crystal Jaing, Kasthuri Venkateswaran
Software Mentions: 5
Published: over 7 years ago