Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: package

https://packages.ecosyste.ms/registries/pypi.org/packages/package

package is a package to package your package
1 version
Latest release: over 13 years ago
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Papers Mentioning package 1,300

10.15252/emmm.201910491
Macrophages induce malignant traits in mammary epithelium via IKKε/TBK1 kinases and the serine biosynthesis pathway
Cited by: 9
Author(s): Ewa Wilcz-Villega, Edward Carter, Alastair Ironside, Ruoyan Xu, Isabella Mataloni, Julie Holdsworth, William Edward Jones, Rocío Moreno Béjar, Lukas Uhlik, Robert Bentham, Susana A. Godinho, Jesmond Dalli, Richard Grose, György Szabadkai, Louise Jones, Kairbaan Hodivala‐Dilke, Katiuscia Bianchi
Software Mentions: 2
Published: almost 5 years ago
10.15252/emmm.201910852
A thiol‐bound drug reservoir enhances APR‐246‐induced mutant p53 tumor cell death
Cited by: 20
Author(s): Sophia Ceder, Sofi Eriksson, Emarndeena H Cheteh, Swati Dawar, Mariana Corrales Benitez, Vladimir J. N. Bykov, Kenji M. Fujihara, Mélodie Grandin, Xiaodun Li, Susanne Ramm, Corina Behrenbruch, Kaylene J. Simpson, Frédéric Hollande, Lars Abrahmsén, Nicholas J. Clemons, Klas G. Wiman
Software Mentions: 2
Published: almost 4 years ago
10.17179/excli2017-752
The predictive value of pre- and post-induction chemotherapy plasma EBV DNA level and tumor volume for the radiosensitivity of locally advanced nasopharyngeal carcinoma.
Cited by: 6
Author(s): Yang Song, He Xiao, Zhenzhou Yang, Mingying Geng, Jungang Ma, Yujiang Ren, Yun Liu, Ge Wang
Software Mentions: 2
Published: almost 8 years ago
10.1002/ece3.3116
A novel meta-analytical approach to improve systematic review of rates and patterns of microevolution
Cited by: 3
Author(s): Lucas D. Gorné, Sandra Dı́az
Software Mentions: 2
Published: over 7 years ago
10.1002/ece3.736
Multivariate sexual selection on male song structure in wild populations of sagebrush crickets,Cyphoderris strepitans(Orthoptera: Haglidae)
Cited by: 11
Author(s): Geoffrey D. Ower, Kevin A. Judge, Sandra Steiger, Kyle J. Caron, Rebecca A. Smith, John Hunt, Scott K. Sakaluk
Software Mentions: 2
Published: over 11 years ago
10.1002/ece3.7668
Range‐wide breeding habitat use of the critically endangered Yellow‐breasted Bunting<i>Emberiza aureola</i>after population collapse
Cited by: 3
Author(s): Ilka Beermann, Alexander Thomas, Yury Anisimov, Marc Bastardot, Nyambayar Batbayar, Batmunkh Davaasuren, Yu.N. Gerasimov, Makoto Hasebe, G. L. Nakul, Jugdernamjil Nergui, Pavel Ktitorov, Olga Kulikova, Wieland Heim
Software Mentions: 2
Published: over 3 years ago
10.1002/ece3.2570
Dominance in a ground‐dwelling ant community of banana agroecosystem
Cited by: 12
Author(s): Dominique Carval, Violaine Cotté, Rémi Resmond, Benjamin Perrin, Philippe Tixier
Software Mentions: 2
Published: about 8 years ago
10.1002/ece3.897
Invasion biology in non‐free‐living species: interactions between abiotic (climatic) and biotic (host availability) factors in geographical space in crayfish commensals (Ostracoda, Entocytheridae)
Cited by: 14
Author(s): Alexandre Mestre, Josep A. Aguilar-Alberola, D. A. T. Baldry, Hüsamettin Balkıs, Adam Ellis, José A. Gil‐Delgado, Karsten Grabow, Göran Klobučar, Antonín Kouba, Ivana Maguire, Andreas Martens, Ayşegül Mülayim, Juan Rueda, Burkhard Scharf, Menno Soes, Juan S. Monrós, Francesc Mesquita‐Joanes
Software Mentions: 2
Published: almost 11 years ago
10.1002/ece3.7490
Ancestral ecological regime shapes reaction to food limitation in the Least Killifish, <i>Heterandria</i><i> </i><i>formosa</i>
Cited by: 3
Author(s): Anja Felmy, Jeff Leips, Joseph Travis
Software Mentions: 2
Published: over 3 years ago
10.1002/ecy.3181
Scale‐dependent effects of host patch traits on species composition in a stickleback parasite metacommunity
Cited by: 17
Author(s): Daniel I. Bolnick, Emlyn J. Resetarits, Kimberly M. Ballare, Yoel E. Stuart, William E. Stutz
Software Mentions: 2
Published: about 4 years ago
10.1111/1462-2920.14297
Bacterial interactions during sequential degradation of cyanobacterial necromass in a sulfidic arctic marine sediment
Cited by: 39
Author(s): Albert Müller, Claus Pelikan, Júlia R. de Rezende, Kenneth Wasmund, Martina Putz, Clemens Glombitza, Kasper Urup Kjeldsen, Bo Barker Jørgensen, Alexander Loy
Software Mentions: 2
Published: over 6 years ago
10.1111/1758-2229.12684
Newly designed 16S rRNA metabarcoding primers amplify diverse and novel archaeal taxa from the environment
Cited by: 80
Author(s): Mohammad Bahram, Sten Anslan, Falk Hildebrand, Peer Bork, Leho Tedersoo
Software Mentions: 2
Published: about 6 years ago
10.1186/1756-8935-7-5
The PEG13-DMR and brain-specific enhancers dictate imprinted expression within the 8q24 intellectual disability risk locus
Cited by: 43
Author(s): Franck Court, Cristina Camprubí, Cristina Vicente-García, Amy Guillaumet-Adkins, Ángela Sparago, Davide Seruggia, Juan Sandoval, Manel Esteller, Alex Martín‐Trujillo, Andrea Riccio, Lluı́s Montoliu, David Gabriel Monk
Software Mentions: 2
Published: over 10 years ago
10.1007/s10654-015-0039-0
Reference ranges and determinants of total hCG levels during pregnancy: the Generation R Study
Cited by: 83
Author(s): Tim I M Korevaar, Eric A.P. Steegers, Yolanda B. de Rijke, Sarah Schalekamp‐Timmermans, Willy Visser, Albert Hofman, Vincent W. V. Jaddoe, Henning Tiemeier, Theo J. Visser, Marco Medici, Robin P. Peeters
Software Mentions: 2
Published: over 9 years ago
10.1038/s41431-019-0563-6
TCTEX1D1 is a genetic modifier of disease progression in Duchenne muscular dystrophy
Cited by: 29
Author(s): Pietro Spitali, Irina Zaharieva, Stefan Böhringer, Monika Hiller, Amina Chaouch, Andreas Roos, C. Scotton, Mireille Claustres, Luca Bello, Craig McDonald, Eric P. Hoffman, Cinrg Investigators, Z. Koeks, H. Eka D. Suchiman, Sebahattin Çırak, Mariacristina Scoto, Mojgan Reza, Peter A C ‘t Hoen, Erik H. Niks, Sylvie Tuffery‐Giraud, Hanns Lochmüller, Alessandra Ferlini, Francesco Muntoni, Annemieke Aartsma‐Rus
Software Mentions: 2
Published: almost 5 years ago
10.12688/f1000research.25593.1
SARS-CoV-2 meta-interactome suggests disease-specific, autoimmune pathophysiologies and therapeutic targets
Cited by: 11
Author(s): Gianmarco Bellucci, Chiara Ballerini, Rosella Mechelli, Rachele Bigi, Virginia Rinaldi, Roberta Reniè, Maria Chiara Buscarinu, Sergio E. Baranzini, Lohith Madireddy, Giuseppe Matarese, Marco Salvetti, Giovanni Ristori
Software Mentions: 2
Published: over 4 years ago
10.12688/f1000research.53874.2
Rates and predictors of data and code sharing in the medical and health sciences: Protocol for a systematic review and individual participant data meta-analysis.
Cited by: 5
Author(s): Daniel G Hamilton, Hannah Fraser, Fiona Fidler, Steve McDonald, Anisa Rowhani-Farid, Kyungwan Hong, Matthew J. Page
Software Mentions: 2
Published: about 3 years ago
10.1002/2211-5463.12964
LMTK3 promotes tumorigenesis in bladder cancer via the ERK/MAPK pathway
Cited by: 15
Author(s): Tao Jiang, Xia Lu, Feiya Yang, Mingshuai Wang, Hua Yang, Nianzeng Xing
Software Mentions: 2
Published: about 4 years ago
10.1186/s12987-020-00208-1
Contribution of brain pericytes in blood–brain barrier formation and maintenance: a transcriptomic study of cocultured human endothelial cells derived from hematopoietic stem cells
Cited by: 27
Author(s): Marjolein Heymans, Ricardo Figueiredo, Lucie Dehouck, David Francisco, Yuichi Sano, Fumitaka Shimizu, Takashi Kanda, Rémy Bruggmann, Britta Engelhardt, Peter Winter, Fabien Gosselet, Maxime Culot
Software Mentions: 2
Published: over 4 years ago
10.3389/fnagi.2018.00155
Associations of MAP2K3 Gene Variants With Superior Memory in SuperAgers
Cited by: 19
Author(s): Matthew J. Huentelman, Ignazio S. Piras, Ashley L. Siniard, Matthew De Both, Ryan Richholt, Chris Balak, Pouya Jamshidi, Eileen H. Bigio, Sandra Weıntraub, Emmaleigh Loyer, Marek-Marsel Mesulam, Changiz Geula, Emily Rogalskı
Software Mentions: 2
Published: over 6 years ago
10.3389/fcell.2020.00629
A Novel Ten-Gene Signature Predicting Prognosis in Hepatocellular Carcinoma
Cited by: 52
Author(s): Taicheng Zhou, Zhihua Cai, Ning Ma, Wenzhuan Xie, Chan Gao, Mengli Huang, Yuezong Bai, Yangpeng Ni, Yunqiang Tang
Software Mentions: 2
Published: over 4 years ago
10.3389/fgene.2020.00963
Correlation Analysis of Expression Profile and Quantitative iTRAQ-LC-MS/MS Proteomics Reveals Resistance Mechanism Against TuMV in Chinese Cabbage (Brassica rapa ssp. pekinensis)
Cited by: 10
Author(s): Shanwu Lyu, Liwei Gao, Rujia Zhang, Changwei Zhang, Xilin Hou
Software Mentions: 2
Published: over 4 years ago
10.3389/fgene.2017.00231
Using RNA Sequence and Structure for the Prediction of Riboswitch Aptamer: A Comprehensive Review of Available Software and Tools
Cited by: 29
Author(s): Deborah Antunes, Natasha Andressa Nogueira Jorge, Ernesto R. Caffarena, Fábio Passetti
Software Mentions: 2
Published: almost 7 years ago
10.3389/fgene.2020.00664
The Chromosome-Level Genome Assembly and Comprehensive Transcriptomes of the Razor Clam (Sinonovacula constricta)
Cited by: 15
Author(s): Yan Dong, Qifan Zeng, Jianfeng Ren, Hanhan Yao, Liyuan Lv, Lin He, Wenbin Ruan, Qinggang Xue, Zhenmin Bao, Shi Wang, Lin Zhang
Software Mentions: 2
Published: over 4 years ago
10.3389/fgene.2019.00274
Assessment of Autozygosity Derived From Runs of Homozygosity in Jinhua Pigs Disclosed by Sequencing Data
Cited by: 40
Author(s): Zhi-Hong Xu, Hao Sun, Zhe Zhang, Qi Zhao, Babatunde Shittu Olasege, Qiumeng Li, Yumei Yang, Peipei Ma, Xiangzhe Zhang, Qishan Wang, Yuchun Pan
Software Mentions: 2
Published: over 5 years ago
10.3390/genes11020172
Altered miRNA and mRNA Expression in Sika Deer Skeletal Muscle with Age
Cited by: 13
Author(s): Boyin Jia, Yuan Liu, Qining Li, Jiali Zhang, Chao Ge, Wang Gui-wu, Guang Chen, Dongdong Liu, Fenghuan Yang
Software Mentions: 2
Published: almost 5 years ago
10.3390/genes12050764
Characteristics of the AT-Hook Motif Containing Nuclear Localized (AHL) Genes in Carrot Provides Insight into Their Role in Plant Growth and Storage Root Development
Cited by: 4
Author(s): Gabriela Machaj, Dariusz Grzebelus
Software Mentions: 2
Published: over 3 years ago
10.1186/1297-9686-44-3
Long-term response to genomic selection: effects of estimation method and reference population structure for different genetic architectures
Cited by: 49
Author(s): J.W.M. Bastiaansen, Albart Coster, M.P.L. Calus, J.A.M. van Arendonk, H. Bovenhuis
Software Mentions: 2
Published: almost 13 years ago
10.1016/j.gdata.2014.04.006
A definitive haplotype map of structural variations determined by microarray analysis of duplicated haploid genomes
Cited by: 1
Author(s): Tomoko Tahira, Koji Yahara, Yoji Kukita, Koichiro Higasa, Kiyoko Kato, Norio Wake, Kenshi Hayashi
Software Mentions: 2
Published: almost 10 years ago
10.1186/s13059-018-1601-3
Exploring the genetic basis of human population differences in DNA methylation and their causal impact on immune gene regulation
Cited by: 86
Author(s): Lucas T. Husquin, Maxime Rotival, Maud Fagny, Hélène Quach, Nora Zidane, Lisa M. McEwen, Julia L. MacIsaac, Michæl S. Kobor, Hugues Aschard, Étienne Patin, Lluís Quintana‐Murci
Software Mentions: 2
Published: almost 6 years ago
10.1093/gbe/evz073
The Unique Evolutionary Trajectory and Dynamic Conformations of DR and IR/DR-Coexisting Plastomes of the Early Vascular Plant Selaginellaceae (Lycophyte)
Cited by: 24
Author(s): Hongrui Zhang, Qiao‐Ping Xiang, Xian‐Chun Zhang
Software Mentions: 2
Published: over 5 years ago
10.1093/gbe/evaa104
Viviparous Reptile Regarded to Have Temperature-Dependent Sex Determination Has Old XY Chromosomes
Cited by: 32
Author(s): Paola Cornejo‐Páramo, Duminda S. B. Dissanayake, Andrés Lira‐Noriega, Mónica Martínez-Pacheco, Armando Acosta, Ciro Ramírez-Suástegui, Fausto Méndez-de-la-Cruz, Tamás Székely, Araxi O. Urrutia, Arthur Georges, Diego Cortez
Software Mentions: 2
Published: over 4 years ago
10.1186/s13073-015-0131-9
The Sweden Cancerome Analysis Network - Breast (SCAN-B) Initiative: a large-scale multicenter infrastructure towards implementation of breast cancer genomic analyses in the clinical routine
Cited by: 113
Author(s): Lao H. Saal, Johan Vallon‐Christersson, Jari Häkkinen, Cecilia Hegardt, Dorthe Grabau, Christof Winter, Christian Brueffer, Man-Hung Eric Tang, Christel Reuterswärd, Ralph Schulz, Anna Karlsson, Anna Ehinger, Janne Malina, Jonas Manjer, Martin Malmberg, Christer Larsson, Lisa Rydén, Niklas Loman, Åke Borg
Software Mentions: 2
Published: almost 10 years ago
10.1186/s13073-016-0305-0
Epigenetic changes mediated by polycomb repressive complex 2 and E2a are associated with drug resistance in a mouse model of lymphoma
Cited by: 12
Author(s): Colin Flinders, Larry Lam, Liudmilla Rubbi, Roberto Ferrari, Sorel Fitz‐Gibbon, Pao‐Yang Chen, Michael J. Thompson, Heather R. Christofk, David B. Agus, Daniel Ruderman, Parag Mallick, Matteo Pellegrini
Software Mentions: 2
Published: over 8 years ago
10.1093/gigascience/giaa115
Pyntacle: a parallel computing-enabled framework for large-scale network biology analysis
Cited by: 11
Author(s): Luca Parca, Mauro Truglio, Tommaso Biagini, Stefano Castellana, Francesco Petrizzelli, Daniele Capocefalo, Ferenc Jordán, Massimo Carella, Tommaso Mazza
Software Mentions: 2
Published: about 4 years ago
10.1007/s00420-015-1051-0
Shift work and quality of sleep: effect of working in designed dynamic light
Cited by: 28
Author(s): Hanne Irene Jensen, Jakob Markvart, René Holst, Tina Damgaard Thomsen, Jette West Larsen, Dorthe Maria Eg, Lisa Seest Nielsen
Software Mentions: 2
Published: over 9 years ago
10.1111/1365-2656.13376
No evidence for fitness signatures consistent with increasing trophic mismatch over 30 years in a population of European shag <i>Phalacrocorax aristotelis</i>
Cited by: 7
Author(s): Katharine Keogan, Sue Lewis, Richard J. Howells, Mark A. Newell, Michael Harris, Sarah J. Burthe, Richard A. Phillips, Sarah Wanless, Albert B. Phillimore, Francis Daunt
Software Mentions: 2
Published: about 4 years ago
10.7150/jca.33250
Genome-wide analysis to identify a novel microRNA signature that predicts survival in patients with stomach adenocarcinoma
Cited by: 9
Author(s): Shuang Luo, Xiwen Liao, Xiaodong Zhu
Software Mentions: 2
Published: almost 6 years ago
10.7150/jca.46156
Application of cAMP-dependent catalytic subunit β (PRKACB) Low Expression in Predicting Worse Overall Survival: A Potential Therapeutic Target for Colorectal Carcinoma
Cited by: 10
Author(s): Xiaoya Yao, Weixian Hu, Jie Zhang, Chengzhi Huang, Haibi Zhao, Xueqing Yao
Software Mentions: 2
Published: almost 5 years ago
10.1007/s12265-012-9401-8
Next Generation Diagnostics in Inherited Arrhythmia Syndromes
Cited by: 31
Author(s): James S. Ware, Shibu John, Angharad Roberts, Rachel Buchan, Sungsam Gong, Nicholas S. Peters, David Robinson, Anneke Lucassen, Elijah R. Behr, Stuart A. Cook
Software Mentions: 2
Published: about 12 years ago
10.1007/s10877-020-00574-z
Artifacts annotations in anesthesia blood pressure data by man and machine
Cited by: 5
Author(s): Wietze Pasma, Esther M. Wesselink, Stef van Buuren, Jurgen C. de Graaff, Wilton A. van Klei
Software Mentions: 2
Published: over 4 years ago
10.1093/jxb/erw276
Stay-green traits to improve wheat adaptation in well-watered and water-limited environments
Cited by: 137
Author(s): Jack Christopher, Mandy Christopher, Andrew Borrell, S. Fletcher, Karine Chenu
Software Mentions: 2
Published: over 8 years ago
10.1093/jxb/eraa265
Genetic basis of phenotypic plasticity and genotype × environment interactions in a multi-parental tomato population
Cited by: 37
Author(s): Isidore Diouf, Laurent Derivot, Shai Koussevitzky, Yolande Carretero, Frédérique Bitton, Laurence Moreau, Mathilde Causse
Software Mentions: 2
Published: over 4 years ago
10.1098/rspb.2015.2323
Monitoring chicken flock behaviour provides early warning of infection by human pathogen <i>Campylobacter</i>
Cited by: 44
Author(s): Frances M. Colles, Russell Cain, Thomas E. Nickson, Adrian L. Smith, Stephen Roberts, Martin C. J. Maiden, Daniel Lunn, Marian Stamp Dawkins
Software Mentions: 2
Published: almost 9 years ago
10.1098/rsos.181800
Stable isotopes reveal winter feeding in different habitats in blue, fin and sei whales migrating through the Azores
Cited by: 24
Author(s): Mónica Silva, Asunción Borrell, Rui Prieto, Pauline Gauffier, Martine Bérubé, Per J. Palsbøl, Ana Colaço
Software Mentions: 2
Published: over 5 years ago
10.21203/rs.3.rs-62758/v1
Modeling COVID-19 with Human Pluripotent Stem Cell-Derived Cells Reveals Synergistic Effects of Anti-inflammatory Macrophages with ACE2 Inhibition Against SARS-CoV-2
Cited by: 18
Author(s): Fuyu Duan, Liyan Guo, Liuliu Yang, Yanxiao Han, Abhimanyu Thakur, Benjamin E. Nilsson-Payant, Pengfei Wang, Zhao Zhang, Chui Yan, Xin Zhou, Teng Han, Tuo Zhang, Xing Wang, Dong Xu, Xiaohua Duan, Jenny Xiang, Hung‐Fat Tse, Can Liao, Weiren Luo, Fang-Ping Huang, Yawen Chen, Todd Evans, Robert E. Schwartz, Benjamin R. tenOever, David D. Ho, Shuibing Chen, Qizhou Lian, Huanhuan Joyce Chen
Software Mentions: 2
Published: over 4 years ago
10.1038/s41597-019-0240-1
Transcriptome profiling for floral development in reblooming cultivar ‘High Noon’ of Paeonia suffruticosa
Cited by: 9
Author(s): Yanting Chang, Tao Hu, Wenbo Zhang, Lin Zhou, Yan Wang, Zehui Jiang
Software Mentions: 2
Published: about 5 years ago
10.1038/srep23690
Structure Based Docking and Molecular Dynamic Studies of Plasmodial Cysteine Proteases against a South African Natural Compound and its Analogs
Cited by: 66
Author(s): Thommas M. Musyoka, Aquillah M. Kanzi, Kevin A. Lobb, Özlem Tastan Bishop
Software Mentions: 2
Published: over 8 years ago
10.1038/srep23719
Transcriptome analysis in different rice cultivars provides novel insights into desiccation and salinity stress responses
Cited by: 156
Author(s): Rama Shankar, Annapurna Bhattacharjee, Mukesh Jain
Software Mentions: 2
Published: over 8 years ago
10.1038/srep42593
Chilling Affects Phytohormone and Post-Embryonic Development Pathways during Bud Break and Fruit Set in Apple (Malus domestica Borkh.)
Cited by: 19
Author(s): Gulshan Kumar, Khushboo Gupta, Shivalika Pathania, Mohit Kumar Swarnkar, Usha Kumari Rattan, Gagandeep Singh, Ram Kumar Sharma, Anil Kumar Singh
Software Mentions: 2
Published: almost 8 years ago
10.1038/s41598-017-11508-2
Computational Cell Cycle Profiling of Cancer Cells for Prioritizing FDA-Approved Drugs with Repurposing Potential
Cited by: 25
Author(s): Yu‐Chen Lo, Silvia Senese, Bryan France, Ankur A. Gholkar, Robert Damoiseaux, Jorge Z. Torres
Software Mentions: 2
Published: about 7 years ago
10.1038/s41598-017-16673-y
A Novel Communication Value Task Demonstrates Evidence of Response Bias in Cases with Presbyacusis
Cited by: 3
Author(s): Mark A. Eckert, Kenneth I. Vaden, Susan Teubner‐Rhodes, Brandon S. Bentzley
Software Mentions: 2
Published: almost 7 years ago
10.1038/s41598-017-16627-4
A flexible ontology for inference of emergent whole cell function from relationships between subcellular processes
Cited by: 24
Author(s): Jens Hansen, David Meretzky, Simeneh Woldesenbet, Gustavo Stolovitzky, Ravi Iyengar
Software Mentions: 2
Published: almost 7 years ago
10.1038/s41598-018-22471-x
A Prognostic Nomogram for Postoperative Bone Remodeling in Patients with ADDWoR
Cited by: 13
Author(s): Xiaohan Liu, Pei Shen, Xiangyu Wang, Sam Zhang, Jiawei Zheng, Yang Chen
Software Mentions: 2
Published: over 6 years ago
10.1038/s41598-018-25826-6
Transcriptome and Co-Expression Network Analyses Identify Key Genes Regulating Nitrogen Use Efficiency in Brassica juncea L.
Cited by: 31
Author(s): Parul Goel, Nitesh Kumar Sharma, Monika Bhuria, Vishal Sharma, Rashi Chauhan, Shivalika Pathania, Mohit Kumar Swarnkar, Vandna Chawla, Vishal Acharya, Ravi Shankar, Anil Kumar Singh
Software Mentions: 2
Published: over 6 years ago
10.1038/s41598-019-39040-5
Removing the no-analogue bias in modern accelerated tree growth leads to stronger medieval drought
Cited by: 15
Author(s): Tobias Scharnweber, Karl Uwe Heußner, Marko Smiljanić, Ingo Heinrich, Marieke van der Maaten‐Theunissen, Ernst van der Maaten, Thomas Struwe, Allan Buras, Martin Wilmking
Software Mentions: 2
Published: almost 6 years ago
10.1038/s41598-019-40834-w
Genetic overlap between birthweight and adult cardiometabolic diseases has implications for genomic medicine
Cited by: 5
Author(s): Fasil Tekola‐Ayele, Anthony Lee, Tsegaselassie Workalemahu, Wei Emma Zhang, Deepika Shrestha, Azmeraw T. Amare, Marion Ouidir
Software Mentions: 2
Published: over 5 years ago
10.1038/s41598-019-43036-6
Long-term trends, current status, and transitions of water quality in Chesapeake Bay
Cited by: 48
Author(s): Lawrence W. Harding, Michael E. Mallonee, Elgin S. Perry, W. David Miller, Jason E. Adolf, Charles L. Gallegos, Hans W. Paerl
Software Mentions: 2
Published: over 5 years ago
10.1038/s41598-019-48227-9
Metabolomic characterization of myocardial ischemia-reperfusion injury in ST-segment elevation myocardial infarction patients undergoing percutaneous coronary intervention
Cited by: 30
Author(s): Arun Surendran, Michel Aliani, Amir Ravandi
Software Mentions: 2
Published: over 5 years ago
10.1038/s41598-019-49836-0
Temporal changes in transcriptome profile provide insights of White Spot Syndrome Virus infection in Litopenaeus vannamei
Cited by: 27
Author(s): Luca Peruzza, M. S. Shekhar, Karthik Kumar, A. Swathi, K. Karthic, Chris Hauton, K.K. Vijayan
Software Mentions: 2
Published: about 5 years ago
10.1038/s41598-020-61017-y
Transcriptomic and computational analysis identified LPA metabolism, KLHL14 and KCNE3 as novel regulators of Epithelial-Mesenchymal Transition
Cited by: 7
Author(s): Valeria Di Lollo, Angelo Canciello, Massimiliano Orsini, Nicola Bernabò, Massimo Ancora, Marta Di Federico, Valentina Curini, Mauro Mattioli, Valentina Russo, Annunziata Mauro, Cesare Cammà, Barbara Barboni
Software Mentions: 2
Published: over 4 years ago
10.1038/s41598-020-63538-y
Phenology of reproductive condition varies with age and spring weather conditions in male Myotis daubentonii and M. nattereri (Chiroptera: Vespertilionidae)
Cited by: 12
Author(s): Danielle M. Linton, David W. Macdonald
Software Mentions: 2
Published: over 4 years ago
10.1038/s41598-020-64031-2
Common genetic variation in obesity, lipid transfer genes and risk of Metabolic Syndrome: Results from IDEFICS/I.Family study and meta-analysis
Cited by: 21
Author(s): Rajini Nagrani, Ronja Foraita, Francesco Gianfagna, Licia Iacoviello, Staffan Mårild, Nathalie Michels, Dénes Molnár, Luís A. Moreno, Paola Russo, Toomas Veidebaum, Wolfgang Ahrens, Manuela Marron
Software Mentions: 2
Published: over 4 years ago
10.1038/s41598-020-67874-x
Genome-wide mapping and allelic fingerprinting provide insights into the genetics of resistance to wheat stripe rust in India, Kenya and Mexico
Cited by: 7
Author(s): Philomin Juliana, Ravi P. Singh, Julio Huerta Espino, Sridhar Bhavani, M. S. Randhawa, Uttam Kumar, Arun Kumar Joshi, Pradeep Kumar Bhati, Héctor Eduardo Villaseñor Mir, C. N. Mishra, Gyanendra Pratap Singh
Software Mentions: 2
Published: over 4 years ago
10.1038/s41598-020-77547-4
Immunoinformatic design of a COVID-19 subunit vaccine using entire structural immunogenic epitopes of SARS-CoV-2
Cited by: 41
Author(s): Esmaeil Behmard, Bijan Soleymani, Ali Najafi, Ebrahim Barzegari
Software Mentions: 2
Published: almost 4 years ago
10.1038/s41598-021-81240-5
Capture and return of sexual genomes by hybridogenetic frogs provides clonal genome enrichment in a sexual species
Cited by: 4
Author(s): Marie Doležálková-Kaštánková, Glib Mazepa, Daniel L. Jeffries, Nicolas Perrin, Marcela Plötner, Jörg Plötner, Gaston‐Denis Guex, Peter Mikulíček, Albert J. Poustka, José Horacio Grau, Lukáš Choleva
Software Mentions: 2
Published: almost 4 years ago
10.1038/s41598-021-85376-2
Drivers and constraints on offshore foraging in harbour seals
Cited by: 9
Author(s): Heather Vance, Sascha K. Hooker, Lonnie Mikkelsen, Abbo van Neer, Jonas Teilmann, Ursula Siebert, Mark Johnson
Software Mentions: 2
Published: over 3 years ago
10.1038/s41598-021-98536-1
Dissection of the bone marrow microenvironment in hairy cell leukaemia identifies prognostic tumour and immune related biomarkers
Cited by: 6
Author(s): Rachel Koldej, Ashvind Prabahran, Chin Wee Tan, Ashley P Ng, Melissa J. Davis, David Ritchie
Software Mentions: 2
Published: about 3 years ago
10.1038/s41598-021-99396-5
A prediction model using 2-propanol and 2-butanone in urine distinguishes breast cancer
Cited by: 3
Author(s): Shoko Kure, Sera Satoi, T Kitayama, Yuta Nagase, Nobuo Nakano, Marina Yamada, Noboru Uchiyama, Satoshi Miyashita, S. Iida, Hiroyuki Takei, Masao Miyashita
Software Mentions: 2
Published: about 3 years ago
10.3390/s150101825
Inertial Sensor Self-Calibration in a Visually-Aided Navigation Approach for a Micro-AUV
Cited by: 21
Author(s): Francisco Bonin‐Font, Miquel Massot-Campos, Pep Lluis Negre-Carrasco, Gabriel Oliver-Codina, Joan Pau Beltrán
Software Mentions: 2
Published: almost 10 years ago
10.3390/s21113927
Application of Low-Cost MEMS Spectrometers for Forest Topsoil Properties Prediction
Cited by: 4
Author(s): Felix Thomas, Rainer Petzold, Carina Becker, Ulrike Werban
Software Mentions: 2
Published: over 3 years ago
10.1007/s00127-020-01843-7
Network structure of depression symptomology in participants with and without depressive disorder: the population-based Health 2000–2011 study
Cited by: 16
Author(s): Christian Hakulinen, Eiko I. Fried, Laura Pulkki‐Råback, Marianna Virtanen, Jaana Suvisaari, Marko Elovainio
Software Mentions: 2
Published: almost 5 years ago
10.1186/s40064-016-2809-x
SentiHealth: creating health-related sentiment lexicon using hybrid approach
Cited by: 46
Author(s): Muhammad Zubair Asghar, Shakeel Ahmad, Maria Qasim, Syeda Rabail Zahra, Fazal Masud Kundi
Software Mentions: 2
Published: over 8 years ago
10.1038/tp.2016.268
The early growth response protein 1-miR-30a-5p-neurogenic differentiation factor 1 axis as a novel biomarker for schizophrenia diagnosis and treatment monitoring
Cited by: 47
Author(s): S Liu, F Zhang, Yin Yao Shugart, Lei Yang, X Li, Z Liu, Ning Sun, Chunxia Yang, Xiangjie Guo, Jie Shi, L Wang, Li Cheng, K Zhang, Taisheng Yang, Yong Xu
Software Mentions: 2
Published: almost 8 years ago
10.1038/s41398-020-01097-6
Alterations in acylcarnitines, amines, and lipids inform about the mechanism of action of citalopram/escitalopram in major depression
Cited by: 39
Author(s): Siamak MahmoudianDehkordi, Ahmed T. Ahmed, Sudeepa Bhattacharyya, Xianlin Han, Rebecca Baillie, Matthias Arnold, Michelle Skime, Lisa St. John-Williams, M. Arthur Moseley, J. Will Thompson, Gregory Louie, Patricio Riva‐Posse, W. Edward Craighead, William M. McDonald, Ranga Krishnan, A. John Rush, Mark A. Frye, Boadie W. Dunlop, Richard M. Weinshilboum, Rima Kaddurah‐Daouk, Rima Kaddurah‐Daouk, A. John Rush, Jessica D. Tenenbaum, Arthur Moseley, Will J. Thompson, Gregory Louie, Colette Blach, Siamak Mahmoudiandehkhordi, Rebecca Baillie, Xianlin Han, Sudeepa Bhattacharyya, Mark A. Frye, Richard M. Weinshilboum, Ahmed Ahmed, Drew Neavin, Duan Liu, Michelle Skime, Piero Rinaldo, Oliver Fiehn, Christopher Brydges, Helen S. Mayberg, Ki Sueng Choi, Jung-Ho Cha, Gabi Kastenmüller, Matthias Arnold, Elisabeth B. Binder, Janine Knauer-Arloth, Alejo J. Nevado‐Holgado, Lei Shi, Boadie W. Dunlop, Ed Craighead, William M. McDonald, Patricio Riva Posse, Brenda W. J. H. Penninx, Yuri Milaneschi, Rick Jansen, Ranga Krishnan
Software Mentions: 2
Published: over 3 years ago
10.1186/s40246-019-0202-x
Shared genetic underpinnings of childhood obesity and adult cardiometabolic diseases
Cited by: 17
Author(s): Fasil Tekola‐Ayele, Anthony Lee, Tsegaselassie Workalemahu, Katy Sánchez-Pozos
Software Mentions: 2
Published: over 5 years ago
10.1038/s41396-018-0214-x
Environmental radiation alters the gut microbiome of the bank vole Myodes glareolus
Cited by: 45
Author(s): Anton Lavrinienko, Tapio Mappes, Eugene Tukalenko, Timothy A. Mousseau, Anders Pape Møller, Rob Knight, James T. Morton, Luke R. Thompson, Phillip C. Watts
Software Mentions: 2
Published: over 6 years ago
10.1186/s12966-019-0892-4
Isotemporal substitution of inactive time with physical activity and time in bed: cross-sectional associations with cardiometabolic health in the PREDIMED-Plus study
Cited by: 22
Author(s): Aina María Galmés-Panadés, Verónica Varela-Mato, Jadwiga Konieczna, Julia Wärnberǵ, Miguel Ángel Martínez‐González, Dolores Corella, Helmut Schröder, Jesús Vioque, Ángel M. Alonso‐Gómez, J. Alfredo Martínéz, Luís Serra-Majem, Ramón Estruch, Francisco J. Tinahones, José Lapetra, Xavier Pintó, Josep A. Tur, Antonio García‐Rios, Blanca Riquelme-Gallego, José J. Gaforio, Pilar Matía‐Martín, Lidia Daimiel, Rafael Manuel Micó Pérez, Josep Vidal, Clotilde Vázquez, Emilio Ros, Ana García‐Arellano, Andrés Díaz‐López, Eva M. Asensio, Olga Castañer, Francisca Fiol, Luis Alfredo Mira-Castejón, Anai Moreno Rodríguez, Juan Carlos Benavente Marín, Itziar Abete, Laura Tomaino, Rosa Casas, F. Javier Barón López, José Carlos Fernández-García, José Manuel Santos‐Lozano, Ana Galera, Catalina M. Mascaró, Cristina Razquín, Christopher Papandreou, Olga Portolés, Karla Alejandra Pérez-Vega, Miguel Fiol, Laura Compañ-Gabucio, Jessica Vaquero-Luna, Miguel Ruiz‐Canela, Nerea Becerra‐Tomás, Montserrat Fitó, Dora Romaguera
Software Mentions: 2
Published: almost 5 years ago
10.1155/2016/8346198
Bioinformatics Analysis of the Human Surfaceome Reveals New Targets for a Variety of Tumor Types
Cited by: 13
Author(s): André Fonseca, Vandeclécio L. da Silva, Maira Christina Marques Fonseca, Isabella Tanus Job e Meira, Thayná E. da Silva, José Eduardo Kroll, André M. Ribeiro-dos-Santos, Cléber R. Freitas, Raimundo Furtado, Jorge E. de Souza, Beatriz Stransky, Sandro J. de Souza
Software Mentions: 2
Published: almost 9 years ago
10.1186/s12942-015-0027-3
Assessing opportunities for physical activity in the built environment of children: interrelation between kernel density and neighborhood scale
Cited by: 14
Author(s): Christoph Buck, Thomas Kneib, Tobias Tkaczick, Kenn Konstabel, Iris Pigeot
Software Mentions: 2
Published: almost 9 years ago
10.1007/s00414-020-02493-9
Aquaporin-1 and aquaporin-9 gene variations in sudden infant death syndrome
Cited by: 6
Author(s): Siri Hauge Opdal, Linda Ferrante, Torleiv O. Rognum, Arne Stray-Pedersen
Software Mentions: 2
Published: almost 4 years ago
10.1155/2012/201389
Diversity across Seasons of Culturable<i>Pseudomonas</i>from a Desiccation Lagoon in Cuatro Cienegas, Mexico
Cited by: 20
Author(s): Alejandra Rodríguez‐Verdugo, Valeria Souza, Luis E. Eguiarte, Ana E. Escalante
Software Mentions: 2
Published: almost 13 years ago
10.22038/ijbms.2020.43535.10224
Spermatogonia apoptosis induction as a possible mechanism of Toxoplasma gondii-induced male infertility.
Cited by: 1
Author(s): Jasem Saki, Mohamad Sabaghan, Reza Arjmand, Ali Teimoori, Mohammad Rashno, Ghasem Saki, Saeedeh Shojaee
Software Mentions: 2
Published: about 4 years ago
10.2196/24205
Transforming a Patient Registry Into a Customized Data Set for the Advanced Statistical Analysis of Health Risk Factors and for Medication-Related Hospitalization Research: Retrospective Hospital Patient Registry Study
Cited by: 5
Author(s): Zhivko Taushanov, Henk Verloo, Boris Wernli, Saviana Di Giovanni, Armin von Gunten, Filipa Pereira
Software Mentions: 2
Published: over 3 years ago
10.3892/ol.2014.2613
Pathogenesis analysis of pituitary adenoma based on gene expression profiling
Cited by: 9
Author(s): Weimin Wang, Zhiming Xu, Li Fu, Wei Liu, Xingang Li
Software Mentions: 2
Published: about 10 years ago
10.7554/eLife.70676
The roles of history, chance, and natural selection in the evolution of antibiotic resistance
Cited by: 17
Author(s): Alfonso Santos-López, C. W. Marshall, Allison L Haas, Caroline B. Turner, Javier Rasero, Vaughn S. Cooper
Software Mentions: 2
Published: about 3 years ago
10.7554/eLife.61036
Deletion of Stk11 and Fos in mouse BLA projection neurons alters intrinsic excitability and impairs formation of long-term aversive memory
Cited by: 5
Author(s): David Levitan, Chenghao Liu, Tracy Yang, Yasuyuki Shima, Jian-You Lin, Joseph Wachutka, Yasmin Marrero, Ramin Ali Marandi Ghoddousi, Eduardo da Veiga Beltrame, Troy A. Richter, Donald B. Katz, Sacha B. Nelson
Software Mentions: 2
Published: over 4 years ago
10.3390/ijms21165649
Appraising the Genetic Architecture of Kernel Traits in Hexaploid Wheat Using GWAS
Cited by: 16
Author(s): Muhammad Ali, Weicheng Hu, Zhaoyang Li, Jianguo Li, Guosheng Xie, Jibin Wang, Lingqiang Wang
Software Mentions: 2
Published: over 4 years ago
10.3390/ijms21186895
Novel Gene Rearrangement and the Complete Mitochondrial Genome of Cynoglossus monopus: Insights into the Envolution of the Family Cynoglossidae (Pleuronectiformes)
Cited by: 6
Author(s): Chen Wang, Hao Chen, Silin Tian, Cheng Yang, Xiao Chen
Software Mentions: 2
Published: about 4 years ago
10.3390/ijms22168789
TF–RBP–AS Triplet Analysis Reveals the Mechanisms of Aberrant Alternative Splicing Events in Kidney Cancer: Implications for Their Possible Clinical Use as Prognostic and Therapeutic Biomarkers
Cited by: 5
Author(s): Meng Xiao He, Fuyan Hu
Software Mentions: 2
Published: over 3 years ago
10.2196/jmir.9644
Online Information Infrastructure Increases Inter-Rater Reliability of Medical Coders: A Quasi-Experimental Study (Preprint)
Cited by: 6
Author(s): Julian Varghese, Sarah Sandmann, Martin Dugas
Software Mentions: 2
Published: almost 7 years ago
10.1186/1869-5760-3-32
Ocular tolerability and efficacy of intravitreal and subconjunctival injections of sirolimus in patients with non-infectious uveitis: primary 6-month results of the SAVE Study
Cited by: 83
Author(s): Quan Dong Nguyen, Mohamed Ibrahim, Anthony Watters, Millena Bittencourt, Jithin Yohannan, Yasir J. Sepah, James P. Dunn, Joel Naor, Naveed Shams, Ovais Shaikh, Henry A. Leder, V. Diana
Software Mentions: 2
Published: almost 12 years ago
10.18632/oncotarget.15136
<i>PIGN</i> gene expression aberration is associated with genomic instability and leukemic progression in acute myeloid leukemia with myelodysplastic features
Cited by: 9
Author(s): Emmanuel K. Teye, Abigail Sido, Ping Xin, Niklas Finnberg, Prashanth Gokare, Yuka Imamura Kawasawa, Anna C. Salzberg, Sara Shimko, Michael G. Bayerl, W. Christopher Ehmann, David F. Claxton, Witold B. Rybka, Joseph J. Drabick, Hong Gang Wang, Thomas Abraham, Wafik S. El‐Deiry, Robert A. Brodsky, Raymond J. Hohl, Jeffrey J. Pu
Software Mentions: 2
Published: almost 8 years ago
10.18632/oncotarget.16221
Unique properties of thymic antigen-presenting cells promote epigenetic imprinting of alloantigen-specific regulatory T cells
Cited by: 20
Author(s): Garima Garg, Eirini Nikolouli, Matthias Hardtke‐Wolenski, Aras Toker, Naganari Ohkura, Michael Beckstette, Takahisa Miyao, Robert Geffers, Stefan Floess, Norbert Gerdes, Esther Lutgens, Anke Osterloh, Shohei Hori, Shimon Sakaguchi, Elmar Jaeckel, Jochen Huehn
Software Mentions: 2
Published: over 7 years ago
10.18632/oncotarget.24973
Comprehensive genomic transcriptomic tumor-normal gene panel analysis for enhanced precision in patients with lung cancer
Cited by: 9
Author(s): Shahrooz Rabizadeh, Chad Garner, J. Zachary Sanborn, Stephen C. Benz, Sandeep K. Reddy, Patrick Soon‐Shiong
Software Mentions: 2
Published: over 6 years ago
10.1002/jts.22361
A Cross‐Cultural Comparison of <i>ICD‐11</i> Complex Posttraumatic Stress Disorder Symptom Networks in Austria, the United Kingdom, and Lithuania
Cited by: 27
Author(s): Matthias Knefel, Jonathan I. Bisson, Thanos Karatzias, Evaldas Kazlauskas, Neil P. Roberts
Software Mentions: 2
Published: almost 6 years ago
10.1007/s10964-019-01072-5
Risk Factors for School Absenteeism and Dropout: A Meta-Analytic Review
Cited by: 194
Author(s): Jeanne Gubbels, Claudia E. van der Put, Mark Assink
Software Mentions: 2
Published: over 5 years ago
10.3390/nu10091307
Diet: Cause or Consequence of the Microbial Profile of Cholelithiasis Disease?
Cited by: 15
Author(s): Isabel Gutiérrez-Díaz, Natalia Molinero, Ana Cabrera, José Ignacio Rodrı́guez, Abelardo Margollés, Susana Delgado, Sonia González
Software Mentions: 2
Published: about 6 years ago
10.3390/nu10101488
Family History of Premature Coronary Artery Disease (P-CAD)—A Non-Modifiable Risk Factor? Dietary Patterns of Young Healthy Offspring of P-CAD Patients: A Case-Control Study (MAGNETIC Project)
Cited by: 12
Author(s): Tadeusz Osadnik, Natalia Pawlas, Marta Lonnie, Kamila Osadnik, Mateusz Lejawa, Lidia Wądołowska, Kamil Bujak, Martyna Fronczek, Rafał Reguła, Marcin Gawlita, Joanna Katarzyna Strzelczyk, Marta Góral, Marek Gierlotka, Lech Poloński, Mariusz Gąsior
Software Mentions: 2
Published: about 6 years ago
10.3390/genes6030577
Alu Elements as Novel Regulators of Gene Expression in Type 1 Diabetes Susceptibility Genes?
Cited by: 7
Author(s): Simranjeet Kaur, Flemming Pociot
Software Mentions: 2
Published: over 9 years ago