pypi: package | Projects | Ecosyste.ms: Papers

10.1186/s12891-015-0697-9

Virtual mapping of 260 three-dimensional hemipelvises to analyse gender-specific differences in minimally invasive retrograde lag screw placement in the posterior acetabular column using the anterior pelvic and midsagittal plane as reference
Cited by: 6
Author(s): Björn Gunnar Ochs, Fabian Stuby, Ulrich Stoeckle, Christoph Gonser
Software Mentions: 1
Published: about 11 years ago

10.3390/jcm9051245

Breakpoint Mapping of Symptomatic Balanced Translocations Links the EPHA6, KLF13 and UBR3 Genes to Novel Disease Phenotype
Cited by: 4
Author(s): Victor Murcia Pienkowski, Marzena Kucharczyk, Małgorzata Rydzanicz, Barbara Poszewiecka, Katarzyna A. Pachota, Marlena Młynek, Piotr Stawiński, Agnieszka Pollak, Joanna Kosińska, Katarzyna Wojciechowska, Monika Lejman, Agata Cieślikowska, Dorota Wicher, Agnieszka Stembalska, Karolina Matuszewska, Anna Materna‐Kiryluk, Anna Gambin, K Chrzanowska, Małgorzata Krajewska‐Walasek, Rafał Płoski
Software Mentions: 1
Published: over 6 years ago

10.3390/jcm10112291

Common Mental Disorders, Functional Limitation and Diet Quality Trends and Related Factors among COPD Patients in Spain, 2006–2017: Evidence from Spanish National Health Surveys
Cited by: 2
Author(s): Silvia Portero de la Cruz, Jesús Cebrino
Software Mentions: 1
Published: over 5 years ago

10.3390/jcm10112304

Higher EU-TIRADS-Score Correlated with BRAF V600E Positivity in the Early Stage of Papillary Thyroid Carcinoma
Cited by: 4
Author(s): Karolina Skubisz, Joanna Januszkiewicz-Caulier, Patrycja Cybula, Elwira Bakuła‐Zalewska, Krzysztof Goryca, Agnieszka Paziewska, Filip Ambrożkiewicz, Kosma Woliński, Michał Mikula, Jerzy Ostrowski, Marek Dedecjus
Software Mentions: 1
Published: over 5 years ago

10.1186/s13063-016-1457-3

Bayesian accrual prediction for interim review of clinical studies: open source R package and smartphone application
Cited by: 10
Author(s): Yu Jiang, Peter Guarino, Shuangge Ma, Steve Simon, Matthew S. Mayo, Raghavan Rama, Byron J. Gajewski
Software Mentions: 1
Published: about 10 years ago

10.1177/0022034521997112

Frequent and Persistent Salivary Gland Ectasia and Oral Disease After COVID-19
Cited by: 52
Author(s): Enrico Gherlone, Elisabetta Polizzi, Giulia Tetè, Rebecca De Lorenzo, Cristiano Magnaghi, Patrizia Rovere Querini, Fabio Ciceri
Software Mentions: 1
Published: over 5 years ago

10.1093/jxb/eru423

QTL analysis of root morphology, flowering time, and yield reveals trade-offs in response to drought in Brassica napus
Cited by: 91
Author(s): Richard S. Fletcher, Jack L. Mullen, Annie Heiliger, John McKay
Software Mentions: 1
Published: almost 12 years ago

10.1186/s13613-016-0202-0

Increased mortality in hematological malignancy patients with acute respiratory failure from undetermined etiology: a Groupe de Recherche en Réanimation Respiratoire en Onco-Hématologie (Grrr-OH) study
Cited by: 60
Author(s): Adrien Contejean, Virginie Lemiale, Matthieu Resche‐Rigon, Djamel Mokart, Frédéric Pène, Achille Kouatchet, Julien Mayaux, François Vincent, Martine Nyunga, Fabrice Bruneel, Antoine Rabbat, Pierre Perez, Anne-Pascale Meert, Dominique Benoît, Rébecca Hamidfar, Michaël Darmon, M. Jourdain, Anne Renault, Benoı̂t Schlemmer, Élie Azoulay
Software Mentions: 1
Published: almost 10 years ago

10.1186/s13613-015-0056-x

Withholding or withdrawal of treatment under French rules: a study performed in 43 intensive care units
Cited by: 53
Author(s): Olivier Lesieur, Maxime Leloup, Frédéric Gonzalez, Marie‐France Mamzer
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.ppat.1001024

Discovery of a New Human Polyomavirus Associated with Trichodysplasia Spinulosa in an Immunocompromized Patient
Cited by: 408
Author(s): E. van der Meijden, René Janssens, Chris Lauber, Jan Nico Bouwes Bavinck, Alexander E. Gorbalenya, Mariet C.W. Feltkamp
Software Mentions: 1
Published: about 16 years ago

10.1371/journal.ppat.1002310

A Phenome-Based Functional Analysis of Transcription Factors in the Cereal Head Blight Fungus, Fusarium graminearum
Cited by: 258
Author(s): Hokyoung Son, Young-Su Seo, Kyung-Hee Min, Ae Ran Park, Jungkwan Lee, Jian‐Ming Jin, Yang Lin, Peijian Cao, Sae-Yeon Hong, Min Jung Kim, Seungho Lee, Aram Cho, Seung‐Hoon Lee, Myung-Gu Kim, Yongsoo Kim, Jung-Eun Kim, Jin-Cheol Kim, Gyung Ja Choi, Sung-Hwan Yun, Jae Yun Lim, Minkyun Kim, Yong-Hwan Lee, Yang Do Choi, Yin-Won Lee
Software Mentions: 1
Published: almost 15 years ago

10.1371/journal.ppat.1003047

Neutrophil-derived IL-1β Is Sufficient for Abscess Formation in Immunity against Staphylococcus aureus in Mice
Cited by: 187
Author(s): John S. Cho, Yi Guo, Romela Irene Ramos, Frank Hebroni, Seema B. Plaisier, Caiyun Xuan, Jennifer L. Granick, Hironori Matsushima, Akira Takashima, Yoichiro Iwakura, Ambrose L. Cheung, Genhong Cheng, Delphine J. Lee, Scott I. Simon, Lloyd S. Miller
Software Mentions: 1
Published: almost 14 years ago

10.1371/journal.ppat.1003818

A Human Torque Teno Virus Encodes a MicroRNA That Inhibits Interferon Signaling
Cited by: 77
Author(s): Rodney P. Kincaid, James Burke, J. Colin Cox, Ethel Michele De Villiers, Christopher S. Sullivan
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.ppat.1006666

Genetic economy in picornaviruses: Foot-and-mouth disease virus replication exploits alternative precursor cleavage pathways
Cited by: 29
Author(s): Morgan R. Herod, Sarah Gold, Lidia Lasecka-Dykes, Caroline F. Wright, Joseph C. Ward, Thomas C McLean, Sophie Forrest, Terry Jackson, Tobias J. Tuthill, David J. Rowlands, Nicola J. Stonehouse
Software Mentions: 1
Published: almost 9 years ago

10.1186/1471-2474-15-282

Primum non nocere: shared informed decision making in low back pain – a pilot cluster randomised trial
Cited by: 24
Author(s): Shilpa Patel, Anne Ngũnjiri, Siew Wan Hee, Yaling Yang, Sally Brown, Tim Friede, Frances Griffiths, Joanne Lord, Harbinder Sandhu, Jill Thistlethwaite, Colin Tysall, Martin Underwood
Software Mentions: 1
Published: about 12 years ago

10.1186/s12866-019-1560-1

Laboratory contamination in airway microbiome studies
Cited by: 31
Author(s): Christine Drengenes, Harald G. Wiker, Tharmini Kalananthan, Eli Nordeide, Tomas Mikal Eagan, Rune Nielsen
Software Mentions: 1
Published: about 7 years ago

10.1128/mBio.02007-18

BacCapSeq: a Platform for Diagnosis and Characterization of Bacterial Infections
Cited by: 31
Author(s): Orchid M Allicock, Cheng Guo, Anne‐Catrin Uhlemann, Susan Whittier, Lokendra V. Chauhan, Joel A. Garcia, Adam Price, Stephen S. Morse, Nischay Mishra, Thomas Briese, W. Ian Lipkin
Software Mentions: 1
Published: almost 8 years ago

10.1186/s12920-021-00948-5

Characterizing sensitivity and coverage of clinical WGS as a diagnostic test for genetic disorders
Cited by: 14
Author(s): Yan Sun, Fengxia Liu, Chunna Fan, Yaoshen Wang, Lijie Song, Zhonghai Fang, Rui Han, Zhonghua Wang, Xiaodan Wang, Ziying Yang, Zhenpeng Xu, Jiguang Peng, Cheng Shi, Hongyun Zhang, Wei Dong, Hui Huang, Yun Li, Yanqun Le, Jun Sun, Zhiyu Peng
Software Mentions: 1
Published: over 5 years ago

10.1186/s12881-017-0427-2

Novel APC gene mutations associated with protein alteration in diffuse type gastric cancer
Cited by: 22
Author(s): Souvik Ghatak, Payel Chakraborty, S. Sarkar, Biswajit Chowdhury, Arup Kumar Bhaumik, Nachimuthu Senthil Kumar
Software Mentions: 1
Published: over 9 years ago

10.1186/1477-5956-6-19

Proteomic profiling of urine for the detection of colon cancer
Cited by: 57
Author(s): Douglas G. Ward, Stephen Nyangoma, Howard Joy, Emma Hamilton, Wenbin Wei, Chris Tselepis, Neil Steven, Michael J.O. Wakelam, Philip J. Johnson, Tariq Ismail, Ashley Martin
Software Mentions: 1
Published: about 18 years ago

10.1186/1477-5956-11-26

Nuclear proteome response to cell wall removal in rice (Oryza sativa)
Cited by: 19
Author(s): Hana Mujahid, Feng Tan, Jian Zhang, Babi Ramesh Reddy Nallamilli, Ken Pendarvis, Zhaohua Peng
Software Mentions: 1
Published: about 13 years ago

10.1186/s12909-021-02640-9

Validity evidence for a novel instrument assessing medical student attitudes toward instruction in implicit bias recognition and management
Cited by: 7
Author(s): Cristina M. González, Joseph H. Grochowalski, Ramya Garba, Shacelles Bonner, Paul R. Marantz
Software Mentions: 1
Published: over 5 years ago

10.1017/S0033291714000026

Common versus psychopathology-specific risk factors for psychotic experiences and depression during adolescence
Cited by: 32
Author(s): Daphne‐Zacharenia Kounali, Stanley Zammit, Nicola Wiles, Sarah Sullivan, Mary Cannon, Jan Štochl, Peter B. Jones, Liam Mahedy, Suzanne H. Gage, Jon Heron, Glyn Lewis
Software Mentions: 1
Published: over 12 years ago

10.1111/psyp.13309

The reality of “food porn”: Larger brain responses to food‐related cues than to erotic images predict cue‐induced eating
Cited by: 26
Author(s): Francesco Versace, David W. Frank, Elise M. Stevens, Menton M. Deweese, Michele Guindani, Susan M. Schembre
Software Mentions: 1
Published: over 7 years ago

10.1098/rsos.171707

Combined morphological and phylogenomic re-examination of malawimonads, a critical taxon for inferring the evolutionary history of eukaryotes
Cited by: 32
Author(s): Aaron A. Heiss, Martin Kolísko, Fleming Ekelund, Matthew W. Brown, Andrew J. Roger, Alastair G. B. Simpson
Software Mentions: 1
Published: over 8 years ago

10.3390/ani9100707

Comparison of Defined Course Doses (DCDvet) for Blanket and Selective Antimicrobial Dry Cow Therapy on Conventional and Organic Farms
Cited by: 9
Author(s): Clair L. Firth, Annemarie Käsbohrer, C. Egger-Danner, Klemens Fuchs, Beate Pinior, Franz-Ferdinand Roch, W. Obritzhauser
Software Mentions: 1
Published: almost 7 years ago

10.1093/rb/rbu012

Gene expression profiling and mechanism study of neural stem cells response to surface chemistry
Cited by: 14
Author(s): Ying Wang, Shenglian Yao, Qing‐Yuan Meng, Xiaolong Yu, Xiumei Wang, Fuzhai Cui
Software Mentions: 1
Published: almost 12 years ago

10.1128/mBio.03235-19

Syntrophy via Interspecies H 2 Transfer between Christensenella and Methanobrevibacter Underlies Their Global Cooccurrence in the Human Gut
Cited by: 62
Author(s): Albane Ruaud, Sofia Esquivel-Elizondo, Jacobo de la Cuesta-Zuluaga, Jillian L. Waters, Largus T. Angenent, Nicholas D. Youngblut, Ruth E. Ley
Software Mentions: 1
Published: over 6 years ago

10.1186/s12909-020-02176-4

Attitudes towards Interprofessional education in the medical curriculum: a systematic review of the literature
Cited by: 30
Author(s): Joana Berger-Estilita, Alexander Fuchs, Markus Hahn, Hsin Chiang, Robert Greif
Software Mentions: 1
Published: about 6 years ago

10.34133/2019/2198906

Facilitating Lithium-Ion Diffusion in Layered Cathode Materials by Introducing Li + /Ni 2+ Antisite Defects for High-Rate Li-Ion Batteries
Cited by: 27
Author(s): Zhongfeng Tang, Sen Wang, Jiaying Liao, Shuo Wang, Xiaodong He, Bicai Pan, Hong He, Chunhua Chen
Software Mentions: 1
Published: over 7 years ago

10.1186/s12284-020-00431-2

Genome wide association studies for japonica rice resistance to blast in field and controlled conditions
Cited by: 11
Author(s): Andrea Volante, Alessandro Tondelli, Francesca Desiderio, Pamela Abbruscato, Barbara Menin, Chiara Biselli, Laura Casella, Namrata Singh, Susan R. McCouch, Didier Tharreau, Elisa Zampieri, L. Cattivelli, Giampiero Valè
Software Mentions: 1
Published: almost 6 years ago

10.1186/s13049-017-0471-0

Prognostic value of coagulation tests for in-hospital mortality in patients with traumatic brain injury
Cited by: 39
Author(s): Qiang Yuan, Jian Yu, Xing Wu, Yirui Sun, Zhiqi Li, Zhuoying Du, Xuehai Wu, Jin Hu
Software Mentions: 1
Published: over 8 years ago

10.1111/sjos.12423

Combined multiple testing of multivariate survival times by censored empirical likelihood
Cited by: 0
Author(s): Judith H. Parkinson
Software Mentions: 1
Published: over 6 years ago

10.1186/s12916-020-01662-2

A complex systems approach to the study of change in psychotherapy
Cited by: 41
Author(s): Adele M. Hayes, Leigh A. Andrews
Software Mentions: 1
Published: about 6 years ago

10.3390/ani10010132

Innovations in Camera Trapping Technology and Approaches: The Integration of Citizen Science and Artificial Intelligence
Cited by: 39
Author(s): Sian Green, Jonathan P. Rees, Philip A. Stephens, Russell A. Hill, Anthony J. Giordano
Software Mentions: 1
Published: over 6 years ago

10.1186/s12916-021-01974-x

The impact of child health interventions and risk factors on child survival in Kenya, 1993–2014: a Bayesian spatio-temporal analysis with counterfactual scenarios
Cited by: 2
Author(s): Peter M. Macharia, Noel K. Joseph, Robert W. Snow, Benn Sartorius, Emelda A. Okiro
Software Mentions: 1
Published: over 5 years ago

10.1186/s12879-020-05121-4

Simulating transmission of ESKAPE pathogens plus C. difficile in relevant clinical scenarios
Cited by: 5
Author(s): Katharina L. Weber, Danielle S. LeSassier, Anthony D. Kappell, Kathleen Q. Schulte, Nicole Westfall, Nicolette C. Albright, Gene D. Godbold, Veena Palsikar, Carlos Acevedo, Krista Ternus, F. Curtis Hewitt
Software Mentions: 1
Published: about 6 years ago

10.1186/s12913-020-05742-0

Analyzing the impact of a state concussion law using an autoregressive integrated moving average intervention analysis
Cited by: 1
Author(s): Lihong Huang, Lindsay Sullivan, Jingzhen Yang
Software Mentions: 1
Published: almost 6 years ago

10.3390/ani10020222

Not in My Backyard: Public Perceptions of Wildlife and ‘Pest Control’ in and around UK Homes, and Local Authority ‘Pest Control’
Cited by: 21
Author(s): Sandra E. Baker, Stephanie A Maw, Paul J. Johnson, David W. Macdonald
Software Mentions: 1
Published: over 6 years ago

10.1101/2021.02.05.21251235

Emergence of an early SARS-CoV-2 epidemic in the United States
Cited by: 5
Author(s): Mark Zeller, Karthik Gangavarapu, Catelyn Anderson, Allison R. Smither, John A. Vanchiere, Rebecca Rose, Gytis Dudas, Donald R. Snyder, Alexander Watts, Nathaniel L. Matteson, Refugio Robles‐Sikisaka, Maximilian Marshall, Amy K. Feehan, Gilberto Sabino‐Santos, Antoinette R. Bell-Kareem, Laura D. Hughes, Manar Alkuzweny, Patricia Snarski, Julia Garcia‐Diaz, Rona S. Scott, Lilia I. Melnik, Raphaëlle Klitting, Michelle McGraw, Pedro Belda-Ferre, Peter DeHoff, Shashank Sathe, Clarisse Marotz, Nathan D. Grubaugh, David J. Nolan, Arnaud Drouin, Kaylynn J. Genemaras, Karissa Chao, Sarah E. Topol, Emily Spencer, Laura Nicholson, Stefan Aigner, G Yeo, Lauge Farnaes, Charlotte A. Hobbs, Louise C. Laurent, Rob Knight, Emma B. Hodcroft, Kamran Khan, Dahlene N. Fusco, Vaughn S. Cooper, Phillipe Lemey, Lauren Gardner, Susanna L. Lamers, Jeremy P. Kamil, Robert F. Garry, Marc A. Suchard, Kristian G. Andersen
Software Mentions: 1
Published: over 5 years ago

10.1186/1471-2164-15-991

Unraveling Mycobacterium tuberculosis genomic diversity and evolution in Lisbon, Portugal, a highly drug resistant setting
Cited by: 49
Author(s): João Perdigão, Hugo Silva, Diana Machado, Rita Macedo, Fernando Maltêz, Carla Silva, Luísa Jordão, Isabel Couto, Kim Mallard, Francesc Español i Coll, Grant A. Hill-Cawthorne, Ruth McNerney, Arnab Pain, Taane G. Clark, Miguel Viveiros, Isabel Portugal
Software Mentions: 1
Published: almost 12 years ago

10.1038/srep31523

Cytoplasmic dynein binding, run length, and velocity are guided by long-range electrostatic interactions
Cited by: 34
Author(s): Lin Li, Joshua Alper, Emil Alexov
Software Mentions: 1
Published: about 10 years ago

10.1038/srep36819

Systems-level chromosomal parameters represent a suprachromosomal basis for the non-random chromosomal arrangement in human interphase nuclei
Cited by: 5
Author(s): S. N. Fatakia, Ishita Mehta, Basuthkar J. Rao
Software Mentions: 1
Published: almost 10 years ago

10.1101/2021.05.13.21257065

A common allele of HLA mediates asymptomatic SARS-CoV-2 infection
Cited by: 5
Author(s): Danillo G. Augusto, Tasneem Yusufali, Noah D. Peyser, Xochitl Butcher, Gregory M. Marcus, Jeffrey E. Olgin, Mark J. Pletcher, Martin Maiers, Jill A. Hollenbach
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-017-00189-6

Genome-wide association analysis identifies loci governing mercury accumulation in maize
Cited by: 10
Author(s): Zhan Zhao, Zhongjun Fu, Yanan Lin, Hao Chen, Kun Liu, Xiaolong Xing, Zonghua Liu, Weihua Li, Jihua Tang
Software Mentions: 1
Published: over 9 years ago

10.1186/s12864-015-1688-9

RNA-seq analysis of an apical meristem time series reveals a critical point in Arabidopsis thaliana flower initiation
Cited by: 66
Author(s): Anna V. Klepikova, Maria D. Logacheva, Sergey E. Dmitriev, Aleksey A. Penin
Software Mentions: 1
Published: about 11 years ago

10.1038/s41598-017-05439-1

Large Scale Metabolic Profiling identifies Novel Steroids linked to Rheumatoid Arthritis
Cited by: 23
Author(s): Noha A. Yousri, Karim Bayoumy, Wessam Gad Elhaq, Robert P. Mohney, Samar Al Emadi, Mohammed Hammoudeh, Hussein Halabi, Basel Masri, Humeira Badsha, Imad Uthman, Robert M. Plenge, Richa Saxena, Karsten Suhre, Thurayya Arayssi
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-10989-5

The overlaying oil type influences in vitro embryo production: differences in composition and compound transfer into incubation medium between oils
Cited by: 21
Author(s): Cristina A. Martínez, Alicia Nohalez, Inmaculada Parrilla, Miguel Motas, Jordi Roca, Inmaculada Romero, Diego L. García‐González, C. Cuello, Heriberto Rodríguez-Martinez, Emilio A. Martı́nez, M.A. Gil
Software Mentions: 1
Published: about 9 years ago

10.3390/ijerph17030958

Effect of the Financial Crisis on Socioeconomic Inequalities in Mortality in Small Areas in Seven Spanish Cities
Cited by: 7
Author(s): Mercè Gotsens, Josep Ferrando, Marc Marí-Dell’Olmo, Laia Palència, Xavier Bartoll, Ana Gandarillas, Pablo Sánchez‐Villegas, Santi Esnaola, Antonio Daponte, Carme Borrell
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-017-14791-1

Molecular Insights into Antimicrobial Resistance Traits of Multidrug Resistant Enteric Pathogens isolated from India
Cited by: 30
Author(s): Promod Kumar, Satyabrata Bag, Tarini Shankar Ghosh, Prasanta Kumar Dey, Mayanka Dayal, Bipasa Saha, Jyoti Verma, Archana Pant, Shruti Saxena, Anbumani Desigamani, Preety Rana, Dhirendra Kumar, Neetu Sharma, Pranita Hanpude, Tushar Kanti Maiti, Asish K. Mukhopadhyay, Rupak K. Bhadra, G. Balakrish Nair, Thandavarayan Ramamurthy, Bhabatosh Das
Software Mentions: 1
Published: almost 9 years ago

10.3390/ijerph17072587

Accumulated Long-Term Exposure to Workplace Bullying Impairs Psychological Hardiness: A Five-Year Longitudinal Study among Nurses
Cited by: 11
Author(s): Kristina Vaktskjold Hamre, Ståle Einarsen, Øystein Løvik Hoprekstad, Ståle Pallesen, Bjørn Bjorvatn, Siri Waage, Bente E. Moen, Anette Harris
Software Mentions: 1
Published: over 6 years ago

10.1038/ismej.2016.47

Genetic and life-history traits associated with the distribution of prophages in bacteria
Cited by: 268
Author(s): Marie Touchon, Aude Bernheim, Eduardo P. C. Rocha
Software Mentions: 1
Published: over 10 years ago

10.1038/s41598-017-18276-z

Active State Organization of Spontaneous Behavioral Patterns
Cited by: 12
Author(s): Christopher Hillar, G. Onnis, Darren Rhea, Laurence H. Tecott
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-21695-1

Matched case-control study of the influence of inland waters surrounding poultry farms on avian influenza outbreaks in Japan
Cited by: 9
Author(s): Yumiko Shimizu, Yoko Hayama, Takehisa Yamamoto, Kiyokazu Murai, Toshiyuki Tsutsui
Software Mentions: 1
Published: over 8 years ago

10.3390/ijerph17082750

Naive Forecast for COVID-19 in Utah Based on the South Korea and Italy Models-the Fluctuation between Two Extremes
Cited by: 15
Author(s): Fares Qeadan, Trenton Honda, Lisa H. Gren, Jennifer Dailey-Provost, L. Scott Benson, James VanDerslice, Christina A. Porucznik, Abigail Waters, Sajni Lacey, Kimberley Shoaf
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-018-23044-8

3.4 million real-world learning management system logins reveal the majority of students experience social jet lag correlated with decreased performance
Cited by: 43
Author(s): Benjamin L. Smarr, Aaron E. Schirmer
Software Mentions: 1
Published: over 8 years ago

10.1186/s12864-019-5839-2

Genome-wide identification and characterization of ABA receptor PYL/RCAR gene family reveals evolution and roles in drought stress in Nicotiana tabacum
Cited by: 32
Author(s): Ge Bai, He Xie, Huaiying Yao, Liang Feng, Xuejun Chen, Yihan Zhang, Bingguan Xiao, Jun Yang, Yongping Li, Da-Hai Yang
Software Mentions: 1
Published: about 7 years ago

10.1186/1756-9966-33-49

A 41-gene signature derived from breast cancer stem cells as a predictor of survival
Cited by: 24
Author(s): Zhiqiang Yin, Jing Liu, Yingchun Xu, Jian Yu, Guohui Ding, Feng Yang, Lei Tang, Baohong Liu, Yue Ma, Yuwei Xia, Xiaolin Lin, Hongxia Wang
Software Mentions: 1
Published: over 12 years ago

10.1038/s41598-018-26000-8

Novel internal regulators and candidate miRNAs within miR-379/miR-656 miRNA cluster can alter cellular phenotype of human glioblastoma
Cited by: 22
Author(s): Subhashree Nayak, Meghali Aich, Anupam Kumar, Suman Sengupta, Prajakta Bajad, Parashar Dhapola, Deepanjan Paul, Kiran Narta, Suvendu Purkrait, Bharati Mehani, Ashish Suri, Debojyoti Chakraborty, Arijit Mukhopadhyay, Chitra Sarkar
Software Mentions: 1
Published: over 8 years ago

10.1186/s12864-021-07607-0

Long-read metagenomics retrieves complete single-contig bacterial genomes from canine feces
Cited by: 37
Author(s): Anna Cuscó, Daniel Catalá Pérez, Joaquim Viñes, Norma Fàbregas, Olga Francino
Software Mentions: 1
Published: over 5 years ago

10.1186/1471-2164-12-316

Comparative genomics of Escherichia coli isolated from patients with inflammatory bowel disease
Cited by: 44
Author(s): Rebecca Munk Vejborg, Viktoria Hancock, Andreas Munk Petersen, Karen A. Krogfelt, Per Klemm
Software Mentions: 1
Published: about 15 years ago

10.1186/1471-2164-6-62

In vitro identification and in silico utilization of interspecies sequence similarities using GeneChip® technology
Cited by: 38
Author(s): Dmitry N. Grigoryev, Shwu Fan, Brett A. Simon, Rafael A. Irizarry, Shui Q. Ye, Joe G.N. Garcia
Software Mentions: 1
Published: over 21 years ago

10.1186/s12864-016-3056-9

Comparative genomics reveals Lysinibacillus sphaericus group comprises a novel species
Cited by: 16
Author(s): Camilo Gómez-Garzón, Alejandra Hernández-Santana, Jenny Dussán
Software Mentions: 1
Published: about 10 years ago

10.1186/1471-2164-13-S7-S17

MicroRNA-centric measurement improves functional enrichment analysis of co-expressed and differentially expressed microRNA clusters
Cited by: 10
Author(s): Su Yeon Lee, Kyung-Ah Sohn, Ju Han Kim
Software Mentions: 1
Published: almost 14 years ago

10.1186/1471-2164-13-594

Molecular evidence for the bi-clonal origin of neuroendocrine tumor derived metastases
Cited by: 14
Author(s): Beate Rinner, Birgit Gallè, Slave Trajanoski, Carina Fischer, Martina Hatz, Theresa Maierhofer, Gabriele Michelitsch, Farid Moinfar, Ingeborg Stelzer, Roswitha Pfragner, Christian Godballe
Software Mentions: 1
Published: almost 14 years ago

10.1002/ajmg.a.36017

Confirmation of GRHL2 as the gene for the DFNA28 locus
Cited by: 39
Author(s): Barbara Vona, Indrajit Nanda, Cordula Neuner, Tobias Müller, Thomas Haaf
Software Mentions: 1
Published: about 13 years ago

10.1038/s41598-019-40058-y

Identification of novel population clusters with different susceptibilities to type 2 diabetes and their impact on the prediction of diabetes
Cited by: 18
Author(s): Seongbeom Cho, Sang Cheol Kim, Myung Guen Chung
Software Mentions: 1
Published: over 7 years ago

10.1186/s12864-016-3338-2

Carbohydrate metabolism in Oenococcus oeni: a genomic insight
Cited by: 17
Author(s): Alice Cibrario, Claire Peanne, Marine Lailheugue, Hugo Campbell-Sills, Marguerite Dols‐Lafargue
Software Mentions: 1
Published: almost 10 years ago

10.1111/acel.12608

Identification of tissue-specific transcriptional markers of caloric restriction in the mouse and their use to evaluate caloric restriction mimetics
Cited by: 41
Author(s): Jamie L. Barger, James M. Vann, Nicole Cray, Thomas D. Pugh, Angela Mastaloudis, Shelly N. Hester, Steven Wood, Michael A. Newton, Richard Weindruch, Tomas A. Prolla
Software Mentions: 1
Published: over 9 years ago

10.1002/jev2.12064

Molecular and functional profiling of apical versus basolateral small extracellular vesicles derived from primary human proximal tubular epithelial cells under inflammatory conditions
Cited by: 13
Author(s): Xiangju Wang, Rachel Wilkinson, Katrina Kildey, Jacobus Ungerer, Michelle M. Hill, Alok K. Shah, Ahmed Mohamed, Mriga Dutt, Jeffrey Molendijk, Helen Healy, Andrew J. Kassianos
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-015-1563-8

Ribosome profiling reveals translation control as a key mechanism generating differential gene expression in Trypanosoma cruzi
Cited by: 104
Author(s): Pablo Smircich, Guillermo Eastman, Saloê Bispo, Marı́a Ana Duhagon, Eloise Pavão Guerra-Slompo, Beatríz Garat, Samuel Goldenberg, David J. Munroe, Bruno Dallagiovanna, Fabíola Holetz, José Sotelo‐Silveira
Software Mentions: 1
Published: about 11 years ago

10.1038/s41598-019-46398-z

Whole genome sequencing of amplified Plasmodium knowlesi DNA from unprocessed blood reveals genetic exchange events between Malaysian Peninsular and Borneo subpopulations
Cited by: 26
Author(s): Ernest Diez Benavente, Ana Gomes, Jeremy Ryan De Silva, Matthew J. Grigg, Harriet Walker, Bridget E. Barber, Timothy William, Tsin Wen Yeo, Paola Flórez de Sessions, Abhinay Ramaprasad, Amy Ibrahim, James Charleston, Martin L. Hibberd, Arnab Pain, Robert W. Moon, Sarah Auburn, Yee Ling Lau, Nicholas M. Anstey, Taane G. Clark, Susana Campino
Software Mentions: 1
Published: about 7 years ago

10.1186/1471-2164-10-385

Microbial comparative pan-genomics using binomial mixture models
Cited by: 94
Author(s): Lars Snipen, Trygve Almøy, David W. Ussery
Software Mentions: 1
Published: over 17 years ago

10.1038/s41598-019-46804-6

Neurotoxicity of organophosphate pesticides could reduce the ability of fish to escape predation under low doses of exposure
Cited by: 46
Author(s): Natalia Ivone Sandoval-Herrera, Freylan Mena, Mario Espinoza, Adarli Romero
Software Mentions: 1
Published: about 7 years ago

10.18632/aging.101990

CA-30, an oligosaccharide fraction derived from Liuwei Dihuang decoction, ameliorates cognitive deterioration via the intestinal microbiome in the senescence-accelerated mouse prone 8 strain
Cited by: 21
Author(s): Jianhui Wang, Lei Xi, Zhitao Xie, Xiaorui Zhang, Xiaorui Cheng, Wenxia Zhou, Yongxiang Zhang
Software Mentions: 1
Published: over 7 years ago

10.1186/s12864-017-4162-z

eRP arrangement: a strategy for assembled genomic contig rearrangement based on replication profiling in bacteria
Cited by: 4
Author(s): Nobuaki Kono, Masaru Tomita, Kazuharu Arakawa
Software Mentions: 1
Published: almost 9 years ago

10.1007/s00384-017-2802-z

Diversion colitis 25 years later: the phenomenon of the disease
Cited by: 16
Author(s): Marek Szczepkowski, Tomasz Banasiewicz, Adam Kobus
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0084517

Angiotensin-Induced Abdominal Aortic Aneurysms in Hypercholesterolemic Mice: Role of Serum Cholesterol and Temporal Effects of Exposure
Cited by: 13
Author(s): Petra Prins, Michael Hill, David Airey, Sam Nwosu, Prudhvidhar R. Perati, Hagai Tavori, MacRae F. Linton, Valentina Kon, Sergio Fazio, Uchechukwu K.A. Sampson
Software Mentions: 1
Published: over 12 years ago

10.1186/1471-2164-9-355

Correlation between the secondary structure of pre-mRNA introns and the efficiency of splicing in Saccharomyces cerevisiae
Cited by: 42
Author(s): Sanja Rogić, Ben Montpetit, Holger H. Hoos, Alan K. Mackworth, B. F. Francis Ouellette, Philip Hieter
Software Mentions: 1
Published: over 18 years ago

10.1371/journal.pone.0215794

Research applications of primary biodiversity databases in the digital age
Cited by: 69
Author(s): Joan E. Ball-Damerow, Laura Brenskelle, Narayani Barve, Pamela S. Soltis, Petra Sierwald, Rüdiger Bieler, Raphael LaFrance, Arturo H. Ariño, Robert Guralnick
Software Mentions: 1
Published: almost 7 years ago

10.1186/1471-2156-15-41

Genome-wide association studies for hematological traits in Chinese Sutai pigs
Cited by: 35
Author(s): Feng Zhang, Zhiyan Zhang, Xueming Yan, Hao Chen, Wanchang Zhang, Hong Yuan, Lusheng Huang
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0235141

Differences in the frequency of genetic variants associated with iron imbalance among global populations
Cited by: 14
Author(s): Momodou W. Jallow, Anthony Cerami, Taane G. Clark, Andrew M. Prentice, Susana Campino
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0156096

Evaluation of the Effects of Pasireotide LAR Administration on Lymphocele Prevention after Axillary Node Dissection for Breast Cancer: Results of a Randomized Non-Comparative Phase 2 Study
Cited by: 5
Author(s): E. Chéreau, Catherine Uzan, Emmanuelle Boutmy, Sarah Zohar, C. Bézu, Chafika Mazouni, Jean-Rémi Garbay, Émile Daraı̈, Roman Rouzier
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0194571

Detection of sister-species in invasive populations of the fall armyworm Spodoptera frugiperda (Lepidoptera: Noctuidae) from Uganda
Cited by: 76
Author(s): Michael Otim, Wee Tek Tay, Tom Walsh, Dalton Kanyesigye, Stella Adumo, Joseph Abongosi, Stephen Ochen, Julius Pyton Sserumaga, Simon Alibu, Grace Abalo, Godfrey Asea, A. Agona
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0128651

Evidence for Immune Response, Axonal Dysfunction and Reduced Endocytosis in the Substantia Nigra in Early Stage Parkinson’s Disease
Cited by: 103
Author(s): Anke A. Dijkstra, Angela Ingrassia, Renée X. de Menezes, Ronald E. van Kesteren, Annemieke Rozemüller, Peter Heutink, Wilma D. J. van de Berg
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0118847

Genetic Dissection of Grain Size and Grain Number Trade-Offs in CIMMYT Wheat Germplasm
Cited by: 80
Author(s): Simon Griffiths, Luzie U. Wingen, Julian Pietragalla, Guillermo García, Ahmed Khairul Hasan, Daniel J. Miralles, Daniel F. Calderini, Jignaben Bipinchandra Ankleshwaria, Michelle Leverington Waite, James Simmonds, J. W. Snape, M.P. Reynolds
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0007155

Identification by Automated Screening of a Small Molecule that Selectively Eliminates Neural Stem Cells Derived from hESCs but Not Dopamine Neurons
Cited by: 38
Author(s): Yi Han, Aaron W. Miller, Julie Mangada, Ying Liu, Andrzej Swistowski, Ming Zhan, Mahendra S. Rao, Xianmin Zeng
Software Mentions: 1
Published: almost 17 years ago

10.1371/journal.pone.0216928

Transcriptional changes associated with advancing stages of heart failure underlie atrial and ventricular arrhythmogenesis
Cited by: 2
Author(s): Mariana Argenziano, Michael Xavier Doss, Megan Tabler, Agapios Sachinidis, Charles Antzelevitch
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-50339-1

New insights on lake sediment DNA from the catchment: importance of taphonomic and analytical issues on the record quality
Cited by: 59
Author(s): Charline Giguet-Covex, Gentile Francesco Ficetola, Kevin Walsh, Jérôme Poulenard, Manon Bajard, Laurent Fouinat, Pierre Sabatier, Ludovic Gielly, Erwan Messager, Anne‐Lise Develle, Fernand David, Pierre Taberlet, Élodie Brisset, Frédéric Guiter, Rémi Sinet, Fabien Arnaud
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0141697

Characterising Uncertainty in Expert Assessments: Encoding Heavily Skewed Judgements
Cited by: 3
Author(s): Rebecca A. O’Leary, Samantha Low‐Choy, Rebecca Fisher, Kerrie Mengersen, M. Julian Caley
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0032166

Monocyte Gene Expression Signature of Patients with Early Onset Coronary Artery Disease
Cited by: 32
Author(s): Suthesh Sivapalaratnam, Hanneke Basart, Nicholas A. Watkins, Stephanie Maiwald, Augusto Rendon, Unni Krishnan, Brigitte M. Sondermeijer, Esther E. Creemers, S.J. Pinto-Sietsma, Kees Hovingh, Willem H. Ouwehand, John J.P. Kastelein, Alison H. Goodall, Mieke D. Trip
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0152760

Protection against SHIV Challenge by Subcutaneous Administration of the Plant-Derived PGT121 Broadly Neutralizing Antibody in Macaques
Cited by: 11
Author(s): Yvonne J. Rosenberg, David C. Montefiori, Celia C. LaBranche, Mark G. Lewis, Markus Sack, Jonathan Lees, Xiaoming Jiang
Software Mentions: 1
Published: over 10 years ago

10.1186/1471-2156-4-S1-S38

Stability of exploratory multivariate data modeling in longitudinal data
Cited by: 2
Author(s): Haydar Sengul, M. Michael Barmada
Software Mentions: 1
Published: over 23 years ago

10.1371/journal.pone.0012141

NMDA Receptors on Non-Dopaminergic Neurons in the VTA Support Cocaine Sensitization
Cited by: 36
Author(s): Yu Luo, Cameron H. Good, Oscar Dı́az-Ruiz, Yajun Zhang, Alexander F. Hoffman, Lufei Shan, Serena Y. Kuang, Nasir Malik, Vladimir I. Chefer, Andreas C. Tomac, Carl R. Lupica, Cristina M. Bäckman
Software Mentions: 1
Published: about 16 years ago

10.1371/journal.pone.0000795

Simple Sequence Repeats Provide a Substrate for Phenotypic Variation in the Neurospora crassa Circadian Clock
Cited by: 65
Author(s): Todd P. Michael, Sohyun Park, Tae Sung Kim, Jim Booth, Amanda Byer, Qi Sun, Joanne Chory, Kwangwon Lee
Software Mentions: 1
Published: about 19 years ago

Projects: pypi: package

Science Score: 65/100

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Papers Mentioning package 1,300