Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: numpy

https://packages.ecosyste.ms/registries/pypi.org/packages/numpy

Fundamental package for array computing in Python
142 versions
Latest release: about 1 year ago
24,932 dependent packages
196,497,842 downloads last month

Papers Mentioning numpy 832

10.3390/e23091165
The Problem of Fairness in Synthetic Healthcare Data
Cited by: 20
Author(s): Karan Bhanot, Qi Miao, John S. Erickson, Isabelle Guyon, Kristin P. Bennett
Software Mentions: 3
Published: about 3 years ago
10.3390/e23081018
Multifractal Behaviors of Stock Indices and Their Ability to Improve Forecasting in a Volatility Clustering Period
Cited by: 10
Author(s): Shuwen Zhang, Fang Wen
Software Mentions: 3
Published: over 3 years ago
10.3389/fimmu.2021.700782
Immune-Based Prediction of COVID-19 Severity and Chronicity Decoded Using Machine Learning
Cited by: 90
Author(s): Bruce K. Patterson, José Guevara-Coto, Ram Yogendra, Edgar B. Francisco, Emily Long, Amruta Pise, Hallison Rodrigues, Purvi Parikh, Javier Mora, Rodrigo Mora-Rodríguez
Software Mentions: 3
Published: over 3 years ago
10.7554/eLife.36928
Spatial sampling in human visual cortex is modulated by both spatial and feature-based attention
Cited by: 21
Author(s): Daniel Marten van Es, Jan Theeuwes, Tomas Knapen
Software Mentions: 3
Published: almost 6 years ago
10.3389/fmed.2021.714221
Disease Severity and Prognosis of SARS-CoV-2 Infection in Hospitalized Patients Is Not Associated With Viral Load in Nasopharyngeal Swab
Cited by: 8
Author(s): Elisabetta Cocconcelli, G. Castelli, Francesco Onelia, Enrico Lavezzo, Chiara Giraudo, Nicol Bernardinello, Giulia Fichera, Davide Leoni, Marco Trevenzoli, Marina Saetta, Annamaria Cattelan, Andrea Crisanti, Paolo Spagnolo, Elisabetta Balestro
Software Mentions: 3
Published: about 3 years ago
10.3390/s19132967
Smart Management Consumption in Renewable Energy Fed Ecosystems
Cited by: 7
Author(s): Francisco-Javier Ferrández-Pastor, Juan Manuel García‐Chamizo, Sergio Gómez-Trillo, Rafael J. Valdivieso-Sarabia, Mario Nieto-Hidalgo
Software Mentions: 3
Published: over 5 years ago
10.1186/2052-4374-26-15
Automation of Workplace Lifting Hazard Assessment for Musculoskeletal Injury Prevention
Cited by: 24
Author(s): June T. Spector, Max Lieblich, Stephen Bao, Kevin J. McQuade, Margaret Hughes
Software Mentions: 3
Published: over 10 years ago
10.7717/peerj.996
NxRepair: error correction in<i>de novo</i>sequence assembly using Nextera mate pairs
Cited by: 20
Author(s): Rebecca R. Murphy, Jared O’Connell, A.J. Cox, Ole Schulz-Trieglaff
Software Mentions: 3
Published: over 9 years ago
10.1002/brb3.1031
Differential patterns of age‐related cortical and subcortical functional connectivity in 6‐to‐10 year old children: A connectome‐wide association study
Cited by: 9
Author(s): Carolyn D. Langen, Ryan L. Muetzel, Laura M. E. Blanken, Aad van der Lugt, Henning Tiemeier, Frank C. Verhulst, Wiro J. Niessen, Tonya White
Software Mentions: 3
Published: over 6 years ago
10.7554/eLife.54507
Predicting geographic location from genetic variation with deep neural networks
Cited by: 57
Author(s): C. J. Battey, Peter L. Ralph, Andrew D. Kern
Software Mentions: 3
Published: over 4 years ago
10.3389/fmolb.2018.00115
Why the Energy Landscape of Barnase Is Hierarchical
Cited by: 5
Author(s): Maya J. Pandya, Stefanie Schiffers, Andrea M. Hounslow, Nicola J. Baxter, Mike Williamson
Software Mentions: 3
Published: almost 6 years ago
10.3390/diagnostics11081398
Colon Tissues Classification and Localization in Whole Slide Images Using Deep Learning
Cited by: 12
Author(s): Pushpanjali Gupta, Yen‐Lin Huang, Prasan Kumar Sahoo, Jeng-Fu You, Sum-Fu Chiang, Djeane Debora Onthoni, Yih‐Jong Chern, Kuo-Yu Chao, Jy-Ming Chiang, Chien-Yuh Yeh, Wen‐Sy Tsai
Software Mentions: 3
Published: over 3 years ago
10.1371/journal.pone.0195798
Automatic lesion detection and segmentation of 18F-FET PET in gliomas: A full 3D U-Net convolutional neural network study
Cited by: 105
Author(s): Paul Blanc-Durand, Axel Van Der Gucht, Niklaus Schaefer, Emmanuel Itti, John O. Prior
Software Mentions: 3
Published: over 6 years ago
10.3390/molecules23061242
Substructural Connectivity Fingerprint and Extreme Entropy Machines—A New Method of Compound Representation and Analysis
Cited by: 6
Author(s): Krzysztof Rataj, Wojciech Marian Czarnecki, Sabina Podlewska, Agnieszka Pocha, Andrzej J. Bojarski
Software Mentions: 3
Published: over 6 years ago
10.1016/j.dib.2020.105736
Dataset for supporting a modular autoinduction device for control of gene expression in Bacillus subtilis
Cited by: 3
Author(s): Graciely Gomes Corrêa, Milca Rachel da Costa Ribeiro Lins, Bruna Fernandes Silva, Gabriela Barbosa de Paiva, Vitória Fernanda Bertolazzi Zocca, Nathan Vinícius Ribeiro, Flávio Pereira Picheli, Matthias Mack, Danielle Biscaro Pedrolli
Software Mentions: 3
Published: over 4 years ago
10.1038/s41598-019-51489-y
NMR-based metabolic profiling and comparison of Japanese persimmon cultivars
Cited by: 9
Author(s): Shinsei Ryu, Tsuyoshi Muramatsu, Kazuo Furihata, Feifei Wei, Masanori Koda, Takuya Miyakawa, Masaru Tanokura
Software Mentions: 3
Published: about 5 years ago
10.1371/journal.pone.0226428
GLAMbox: A Python toolbox for investigating the association between gaze allocation and decision behaviour
Cited by: 7
Author(s): Felix Molter, Armin W. Thomas, Hauke R. Heekeren, Peter N. C. Mohr
Software Mentions: 3
Published: almost 5 years ago
10.1371/journal.pone.0229615
A simple model suggesting economically rational sample-size choice drives irreproducibility
Cited by: 3
Author(s): Oliver Braganza
Software Mentions: 3
Published: over 4 years ago
10.1371/journal.pone.0224524
Investigation into pathophysiology of naturally occurring palatal instability and intermittent dorsal displacement of the soft palate (DDSP) in racehorses: Thyro-hyoid muscles fatigue during exercise
Cited by: 7
Author(s): Marta Cercone, E. G. J. Olsen, Justin Perkins, Jonathan Cheetham, Lisa M. Mitchell, Norm G. Ducharme
Software Mentions: 3
Published: about 5 years ago
10.1016/j.bpj.2018.01.033
CONAN: A Tool to Decode Dynamical Information from Molecular Interaction Maps
Cited by: 70
Author(s): Davide Mercadante, Frauke Gräter, Csaba Daday
Software Mentions: 3
Published: over 6 years ago
10.16910/jemr.14.2.4
Optimizing the usage of pupillary based indicators for cognitive workload
Cited by: 5
Author(s): Benedict C. O. F. Fehringer
Software Mentions: 3
Published: over 3 years ago
10.1186/s12943-016-0554-y
Systems analysis identifies miR-29b regulation of invasiveness in melanoma
Cited by: 18
Author(s): Miles C. Andrews, Joseph Cursons, Daniel Hurley, Matthew Anaka, Jonathan Cebon, Andreas Behren, Edmund J. Crampin
Software Mentions: 3
Published: about 8 years ago
10.1155/2016/8496165
Long Noncoding RNA Identification: Comparing Machine Learning Based Tools for Long Noncoding Transcripts Discrimination
Cited by: 33
Author(s): Siyu Han, Yanchun Liang, Ying Li, Wei Du
Software Mentions: 3
Published: almost 9 years ago
10.1186/s13321-016-0125-7
Bioalerts: a python library for the derivation of structural alerts from bioactivity and toxicity data sets
Cited by: 23
Author(s): Isidro Cortés-Ciriano
Software Mentions: 3
Published: over 8 years ago
10.1186/s12862-021-01782-0
An interplay of resource availability, population size and mutation rate potentiates the evolution of metabolic signaling
Cited by: 1
Author(s): Bhaskar Kumawat, Ramray Bhat
Software Mentions: 3
Published: over 3 years ago
10.1038/s41598-019-41345-4
Single-trial classification of awareness state during anesthesia by measuring critical dynamics of global brain activity
Cited by: 17
Author(s): Leandro M. Alonso, Guillermo Solovey, Toru Yanagawa, Alex Proekt, Guillermo A. Cecchi, Marcelo O. Magnasco
Software Mentions: 3
Published: over 5 years ago
10.7554/eLife.36953
Wnt/PCP controls spreading of Wnt/β-catenin signals by cytonemes in vertebrates
Cited by: 96
Author(s): Benjamin Mattes, Yonglong Dang, Gediminas Greicius, Lilian T. Kaufmann, Benedikt Prunsche, Jakob Rosenbauer, Johannes Stegmaier, Ralf Mikut, Suat Özbek, G. Ulrich Nienhaus, Alexander Schug, David M. Virshup, Steffen Scholpp
Software Mentions: 3
Published: over 6 years ago
10.1186/s13321-019-0354-7
Bayesian optimization for conformer generation
Cited by: 34
Author(s): Lucian Chan, Geoffrey Hutchison, Garrett M. Morris
Software Mentions: 3
Published: over 5 years ago
10.1186/s13321-020-00429-4
AutoGrow4: an open-source genetic algorithm for de novo drug design and lead optimization
Cited by: 57
Author(s): Jacob O. Spiegel, Jacob D. Durrant
Software Mentions: 3
Published: over 4 years ago
10.3390/s18113743
Characterizing Focused Attention and Working Memory Using EEG
Cited by: 35
Author(s): Zainab Mohamed, Mohamed El Halaby, Tamer Said, Doaa M. Shawky, Ashraf H. Badawi
Software Mentions: 3
Published: about 6 years ago
10.3390/s17061263
Comparative Study of Neural Network Frameworks for the Next Generation of Adaptive Optics Systems
Cited by: 17
Author(s): Carlos González-Gutiérrez, Joana Santos, Mario Martínez‐Zarzuela, Alastair Basden, James Osborn, Francisco Javier Díaz Pernas, Francisco Javier de Cos Juez
Software Mentions: 3
Published: over 7 years ago
10.1107/S2052252518012149
Photocage-initiated time-resolved solution X-ray scattering investigation of protein dimerization
Cited by: 25
Author(s): Inokentijs Josts, Stephan Niebling, Yunyun Gao, Matteo Levantino, Henning Tidow, Diana C. F. Monteiro
Software Mentions: 3
Published: about 6 years ago
10.3390/s16030373
Estimating the Underwater Diffuse Attenuation Coefficient with a Low-Cost Instrument: The KdUINO DIY Buoy
Cited by: 29
Author(s): Raúl Bardají, Albert-Miquel Sánchez, Carine Simon, Marcel Robert Wernand, Jaume Piera
Software Mentions: 3
Published: over 8 years ago
10.1038/s41598-017-17071-0
Bayesian Analysis of MicroScale Thermophoresis Data to Quantify Affinity of Protein:Protein Interactions with Human Survivin
Cited by: 7
Author(s): María-José García-Bonete, Mikael Jensen, Christian V. Recktenwald, Sandra Rocha, Volker Stadler, Maria Bokarewa, Gergely Katona
Software Mentions: 3
Published: almost 7 years ago
10.3390/jcm10132753
Fecal Microbial Transplantation versus Mesalamine Enema for Treatment of Active Left-Sided Ulcerative Colitis—Results of a Randomized Controlled Trial
Cited by: 19
Author(s): Jan Březina, Lukáš Bajer, Pavel Wohl, Dana Ďuricová, P Hrabák, Aleš Novotný, Jana Koželuhová, Milan Lukáš, Jakub Mrázek, K. Fliegerová, Simona Kvasnová, Chahrazed Mekadim, Jan Mareš, Julius Špičák, Pavel Drastich
Software Mentions: 3
Published: over 3 years ago
10.1007/s10822-014-9720-8
Efficient calculation of SAMPL4 hydration free energies using OMEGA, SZYBKI, QUACPAC, and Zap TK
Cited by: 13
Author(s): Benjamin A. Ellingson, Matthew T. Geballe, S. Włodek, Christopher I. Bayly, A. Geoffrey Skillman, Anthony Nicholls
Software Mentions: 3
Published: over 10 years ago
10.1038/s41598-019-41814-w
Meta-path Based Prioritization of Functional Drug Actions with Multi-Level Biological Networks
Cited by: 1
Author(s): Seyeol Yoon, Doheon Lee
Software Mentions: 3
Published: over 5 years ago
10.1093/bioinformatics/btaa578
Solubility-Weighted Index: fast and accurate prediction of protein solubility
Cited by: 33
Author(s): Bikash K. Bhandari, Paul P. Gardner, Chun Shen Lim
Software Mentions: 3
Published: over 4 years ago
10.1371/journal.pcbi.1004400
Controlled Measurement and Comparative Analysis of Cellular Components in E. coli Reveals Broad Regulatory Changes in Response to Glucose Starvation
Cited by: 38
Author(s): John R. Houser, Craig S. Barnhart, Daniel R. Boutz, Sean M. Carroll, Aurko Dasgupta, Joshua K. Michener, Brittany D. Needham, Ophelia Papoulas, Viswanadham Sridhara, Dariya K. Sydykova, Christopher J. Marx, M. Stephen Trent, Jeffrey E. Barrick, Edward M. Marcotte, Claus O. Wilke
Software Mentions: 3
Published: over 9 years ago
10.3390/ijerph18157974
“Better If They Laugh with Me than at Me”: The Role of Humor in Coping with Obesity-Related Stigma in Women
Cited by: 5
Author(s): Natalia Mazurkiewicz, Mariusz Lipowski, Jarosław Krefta, Małgorzata Lipowska
Software Mentions: 3
Published: over 3 years ago
10.3390/bioengineering8090129
In Situ Quantification of Polyhydroxybutyrate in Photobioreactor Cultivations of Synechocystis sp. Using an Ultrasound-Enhanced ATR-FTIR Spectroscopy Probe
Cited by: 4
Author(s): Philipp Doppler, Christoph Gasser, Ricarda Kriechbaum, Ardita Ferizi, Oliver Spadiut
Software Mentions: 3
Published: about 3 years ago
10.1080/14756366.2016.1260565
Exploring the first Rimonabant analog-opioid peptide hybrid compound, as bivalent ligand for CB1 and opioid receptors
Cited by: 26
Author(s): Adriano Mollica, Sveva Pelliccia, Valeria Famiglini, Azzurra Stefanucci, Giorgia Macedonio, Annalisa Chiavaroli, Giustino Orlando, Luigi Brunetti, Claudio Ferrante, Stefano Pieretti, Ettore Novellino, Sándor Benyhe, Ferenc Zádor, Anna Erdei, Edina Szűcs, Reza Samavati, Szalbolch Dvrorasko, Csaba Tömböly, Rino Ragno, Alexandros Patsilinakos, Romano Silvestri
Software Mentions: 3
Published: almost 8 years ago
10.1107/S2052252518012058
Unwarping GISAXS data
Cited by: 12
Author(s): Jiliang Liu, Kevin G. Yager
Software Mentions: 3
Published: about 6 years ago
10.1371/journal.pone.0192477
MEA Viewer: A high-performance interactive application for visualizing electrophysiological data
Cited by: 16
Author(s): Daniel Bridges, Kenneth R. Tovar, Bian Wu, Paul K. Hansma, Kenneth S. Kosik
Software Mentions: 2
Published: almost 7 years ago
10.1371/journal.pone.0076211
Sulfamethoxazole Induces a Switch Mechanism in T Cell Receptors Containing TCRVβ20-1, Altering pHLA Recognition
Cited by: 52
Author(s): Stephan Watkins, Werner J. Pichler
Software Mentions: 2
Published: about 11 years ago
10.1371/journal.pone.0251701
Real-time computer-aided diagnosis of focal pancreatic masses from endoscopic ultrasound imaging based on a hybrid convolutional and long short-term memory neural network model
Cited by: 23
Author(s): Ştefan Udriştoiu, Irina M. Cazacu, Lucian Gheorghe Gruionu, Gabriel Gruionu, Andreea Valentina Iacob, Daniela Elena Burtea, Bogdan Silviu Ungureanu, Mădălin Ionuț Costache, Alina Constantin, Carmen Popescu, Ştefan Udriştoiu, Adrian Săftoiu
Software Mentions: 2
Published: over 3 years ago
10.1002/xrs.2727
Increased zinc accumulation in mineralized osteosarcoma tissue measured by confocal synchrotron radiation micro X-ray fluorescence analysis
Cited by: 13
Author(s): Mirjam Rauwolf, Bernhard Pemmer, Andreas Roschger, Anna Turyanskaya, S. Smolek, A. Maderitsch, Peter Hischenhuber, Martin Foelser, R. Simon, Susanna Lang, Stefan Puchner, Reinhard Windhager, Klaus Klaushofer, P. Wobrauschek, Jochen G. Hofstaetter, Paul Roschger, Christina Streli
Software Mentions: 2
Published: almost 8 years ago
10.1371/journal.pone.0160334
MetLab: An In Silico Experimental Design, Simulation and Analysis Tool for Viral Metagenomics Studies
Cited by: 10
Author(s): Martin Norling, Oskar Karlsson Lindsjö, Hadrien Gourlé, Erik Bongcam‐Rudloff, Juliette Hayer
Software Mentions: 2
Published: over 8 years ago
10.1371/journal.pone.0236378
A promising approach for screening pulmonary hypertension based on frontal chest radiographs using deep learning: A retrospective study
Cited by: 16
Author(s): Xiaoling Zou, Yong Ren, Ding-Yun Feng, Xiaofeng He, Yi Guo, Hailing Yang, Xian Li, Jia Bin Fang, Quan Li, Junjie Ye, Lanqing Han, Tiantuo Zhang
Software Mentions: 2
Published: over 4 years ago
10.1371/journal.pone.0024051
A Global Clustering Algorithm to Identify Long Intergenic Non-Coding RNA - with Applications in Mouse Macrophages
Cited by: 27
Author(s): Lana X. Garmire, David Garmire, Wendy Huang, Joyee Yao, Christopher K. Glass, Shankar Subramaniam
Software Mentions: 2
Published: about 13 years ago
10.1371/journal.pone.0197949
Somatic mutations render human exome and pathogen DNA more similar
Cited by: 0
Author(s): Ehsan Ebrahimzadeh, Maggie Engler, David Tse, Rǎzvan Cristescu, Aslan Tchamkerten
Software Mentions: 2
Published: over 5 years ago
10.1186/s12859-020-3435-8
PyBSASeq: a simple and effective algorithm for bulked segregant analysis with whole-genome sequencing data
Cited by: 16
Author(s): Jian Bo Zhang, Dilip R. Panthee
Software Mentions: 2
Published: over 4 years ago
10.3390/molecules24040740
Fentanyl Family at the Mu-Opioid Receptor: Uniform Assessment of Binding and Computational Analysis
Cited by: 38
Author(s): Piotr F. J. Lipiński, Piotr Kossoń, Joanna Matalińska, Piotr Roszkowski, Zbigniew Czarnocki, Małgorzata Jarończyk, Aleksandra Misicka, Jan Cz. Dobrowolski, Joanna Sadlej
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0081177
Activity in a Premotor Cortical Nucleus of Zebra Finches Is Locally Organized and Exhibits Auditory Selectivity in Neurons but Not in Glia
Cited by: 19
Author(s): Michael Hubert Graber, Fritjof Helmchen, Richard H. R. Hahnloser
Software Mentions: 2
Published: almost 11 years ago
10.1371/journal.pone.0219481
The role of oxidant stress and gender in the erythrocyte arginine metabolism and ammonia management in patients with type 2 diabetes
Cited by: 20
Author(s): Martha Lucinda Contreras-Zentella, Lourdes Sánchez-Sevilla, Juan Antonio Suárez‐Cuenca, Marisela Olguín-Martínez, Martha G. Alatriste‐Contreras, Norberto García-García, Lorena Orozco, Rolando Hernández‐Muñoz
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0013981
The Cerebellar Nodulus/Uvula Integrates Otolith Signals for the Translational Vestibulo-Ocular Reflex
Cited by: 33
Author(s): Mark F. Walker, Jing Tian, Xiaoyan Shan, Rafael J. Tamargo, Howard S. Ying, David S. Zee
Software Mentions: 2
Published: about 14 years ago
10.1371/journal.pone.0242166
Using the National Trauma Data Bank (NTDB) and machine learning to predict trauma patient mortality at admission
Cited by: 14
Author(s): Evan J. Tsiklidis, Carrie A. Sims, Talid Sinno, Scott L. Diamond
Software Mentions: 2
Published: about 4 years ago
10.3390/cancers11111680
Radiomics Model Based on Non-Contrast CT Shows No Predictive Power for Complete Pathological Response in Locally Advanced Rectal Cancer
Cited by: 22
Author(s): Gordian Hamerla, Hans‐Jonas Meyer, Peter Hambsch, U. Wolf, Thomas Kuhnt, Karl‐Titus Hoffmann, Alexey Surov
Software Mentions: 2
Published: about 5 years ago
10.1107/S1600577520002362
Solution scattering at the Life Science X-ray Scattering (LiX) beamline
Cited by: 32
Author(s): Lin Yang, Stephen Antonelli, Shirish Chodankar, James R. Byrnes, Edwin Lazo, Kun Qian
Software Mentions: 2
Published: over 4 years ago
10.1093/molbev/msx061
Both maintenance and avoidance of RNA-binding protein interactions constrain coding sequence evolution
Cited by: 7
Author(s): Rosina Savisaar, Laurence D. Hurst
Software Mentions: 2
Published: almost 8 years ago
10.1002/cphc.202000040
The Atomic Partial Charges Arboretum: Trying to See the Forest for the Trees
Cited by: 36
Author(s): Minsik Cho, Nitai Sylvetsky, Sarah Eshafi, Golokesh Santra, Irena Efremenko, Jan M. L. Martin
Software Mentions: 2
Published: over 4 years ago
10.1038/s42003-021-02589-x
3D imaging of human organs with micrometer resolution - applied to the endocrine pancreas
Cited by: 7
Author(s): Max Hahn, Christoffer Nord, Maria Eriksson, Federico Morini, Tomas Alanentalo, Olle Korsgren, Ulf Ahlgren
Software Mentions: 2
Published: about 3 years ago
10.1155/2019/1353601
Generating Point Cloud from Measurements and Shapes Based on Convolutional Neural Network: An Application for Building 3D Human Model
Cited by: 3
Author(s): Mau Tung Nguyen, Dang Thanh Vu, Minh Kieu Tran Thi
Software Mentions: 2
Published: about 5 years ago
10.1155/2019/9682138
Model-Based Quantification of Left Ventricular Diastolic Function in Critically Ill Patients with Atrial Fibrillation from Routine Data: A Feasibility Study
Cited by: 1
Author(s): Nicholas Kiefer, Maximilian Oremek, Andreas Hoeft, Sven Zenker
Software Mentions: 2
Published: over 5 years ago
10.1155/2018/6367243
Understanding Dynamic Status Change of Hospital Stay and Cost Accumulation via Combining Continuous and Finitely Jumped Processes
Cited by: 1
Author(s): Yanqiao Zheng, Xiaobing Zhao, Xiaoqi Zhang
Software Mentions: 2
Published: over 6 years ago
10.7554/eLife.39217
Systematic identification of mutations and copy number alterations associated with cancer patient prognosis
Cited by: 101
Author(s): John K. Smith, Jason M. Sheltzer
Software Mentions: 2
Published: almost 6 years ago
10.3390/diagnostics11091650
A Radiomics Approach to Predict the Emergence of New Hepatocellular Carcinoma in Computed Tomography for High-Risk Patients with Liver Cirrhosis
Cited by: 1
Author(s): Eric Tietz, Daniel Truhn, Gustav Müller‐Franzes, Marie‐Luise Berres, Karim Hamesch, Sven A. Lang, Christiane Kühl, Philipp Bruners, Maximilian Schulze-Hagen
Software Mentions: 2
Published: about 3 years ago
10.3390/diagnostics11081309
Forecasting COVID-19 Severity by Intelligent Optical Fingerprinting of Blood Samples
Cited by: 5
Author(s): Simão Faria, Cristiana Carpinteiro, Vanessa Pinto, S Rodrigues, José Nuno Alves, Filipe Marques, Marta Ribeiro Alves Lourenço, Paulo Henrique dos Santos, Angélica Ramos, Maria João Cardoso, João Tiago Guimarães, Sara Rocha, Paula Sampaio, David A. Clifton, Mehak Mumtaz, Joana S. Paiva
Software Mentions: 2
Published: over 3 years ago
10.3390/e21121206
Patterns of Heart Rate Dynamics in Healthy Aging Population: Insights from Machine Learning Methods
Cited by: 6
Author(s): Danuta Makowiec, Joanna Wdowczyk
Software Mentions: 2
Published: almost 5 years ago
10.3390/e21030268
Implementing a Chaotic Cryptosystem by Performing Parallel Computing on Embedded Systems with Multiprocessors
Cited by: 21
Author(s): Abraham Flores-Vergara, Everardo Inzunza-González, E. E. García-Guerrero, Oscar Roberto López-Bonilla, Eduardo Rodríguez-Orozco, Juan Miguel Hernández-Ontiveros, José Ricardo Cárdenas-Valdez, Esteban Tlelo‐Cuautle
Software Mentions: 2
Published: over 5 years ago
10.1140/epjp/s13360-021-01339-6
A simplified estimate of the effective reproduction number $$R_t$$ using its relation with the doubling time and application to Italian COVID-19 data
Cited by: 13
Author(s): Gianluca Bonifazi, L. Lista, D. Menasce, M. Mezzetto, Д. Педрини, R. Spighi, À. Zoccoli
Software Mentions: 2
Published: over 3 years ago
10.3390/metabo3040853
A Computational Framework for High-Throughput Isotopic Natural Abundance Correction of Omics-Level Ultra-High Resolution FT-MS Datasets
Cited by: 30
Author(s): William J. Carreer, Robert M. Flight, Hunter N. B. Moseley
Software Mentions: 2
Published: about 11 years ago
10.12688/f1000research.24156.1
The impact of community containment implementation timing on the spread of COVID-19: A simulation study
Cited by: 2
Author(s): Attayeb Mohsen, Ahmed B. Alarabi
Software Mentions: 2
Published: over 4 years ago
10.3389/fnbeh.2021.693698
Distinct Profiles of 50 kHz Vocalizations Differentiate Between Social Versus Non-social Reward Approach and Consumption
Cited by: 8
Author(s): Mohammad Seidisarouei, Sander van Gurp, Nicole M. Pranic, Irina Noguer Calabus, Marijn van Wingerden, Tobias Kalenscher
Software Mentions: 2
Published: over 3 years ago
10.3389/fnbeh.2018.00237
Human Vicarious Trial and Error Is Predictive of Spatial Navigation Performance
Cited by: 15
Author(s): Diogo Santos-Pata, Paul F. M. J. Verschure
Software Mentions: 2
Published: about 6 years ago
10.3389/fbioe.2020.00324
Characterization and Classification of Electrophysiological Signals Represented as Visibility Graphs Using the Maxclique Graph
Cited by: 1
Author(s): Erika Elizabeth Rodríguez-Torres, Ulises Paredes-Hernández, Enrique Vázquez-Mendoza, Margarita Tetlalmatzi Montiel, Consuelo Morgado-Valle, Luis Beltrán-Parrazal, Rafael Villarroel-Flores
Software Mentions: 2
Published: over 4 years ago
10.3389/fbioe.2020.00049
Getting CD19 Into Shape: Expression of Natively Folded “Difficult-to- Express” CD19 for Staining and Stimulation of CAR-T Cells
Cited by: 8
Author(s): Elisabeth Lobner, Anna Wachernig, Venugopal Gudipati, Patrick Mayrhofer, Benjamin Salzer, Manfred Lehner, Johannes B. Huppa, Renate Kunert
Software Mentions: 2
Published: almost 5 years ago
10.3389/fchem.2019.00315
Ligand Binding Induces Agonistic-Like Conformational Adaptations in Helix 12 of Progesterone Receptor Ligand Binding Domain
Cited by: 5
Author(s): Lihe Zheng, Kelin Xia, Yuguang Mu
Software Mentions: 2
Published: over 5 years ago
10.3389/fncom.2017.00048
Cliques of Neurons Bound into Cavities Provide a Missing Link between Structure and Function
Cited by: 279
Author(s): Michael Reimann, Max Nolte, Martina Scolamiero, Katharine Turner, Rodrigo Perin, Giuseppe Chindemi, Paweł Dłotko, Ran Levi, Kathryn Hess, Henry Markram
Software Mentions: 2
Published: over 7 years ago
10.3389/fncom.2017.00021
Feature Detection in Visual Cortex during Different Functional States
Cited by: 1
Author(s): Pavel M. Esir, Alexander Simonov, Misha Tsodyks
Software Mentions: 2
Published: over 7 years ago
10.1186/s13756-021-00956-1
Long-term antimicrobial effectiveness of a silver-impregnated foil on high-touch hospital surfaces in patient rooms
Cited by: 1
Author(s): Andreas F. Widmer, Sonja Kuster, Marc Dangel, Sammy Jäger, Reno Frei
Software Mentions: 2
Published: over 3 years ago
10.3389/fgene.2016.00166
Time Hierarchies and Model Reduction in Canonical Non-linear Models
Cited by: 3
Author(s): Hannes Löwe, Andreas Kremling, Alberto Marı́n-Sanguino
Software Mentions: 2
Published: about 8 years ago
10.3389/fnhum.2020.509075
Variance and Scale-Free Properties of Resting-State Blood Oxygenation Level-Dependent Signal After Fear Memory Acquisition and Extinction
Cited by: 5
Author(s): Alina Tetereva, Sergey Kartashov, Alexey Ivanitsky, Olga Martynova
Software Mentions: 2
Published: about 4 years ago
10.3389/fimmu.2017.00143
Investigating Substitutions in Antibody–Antigen Complexes Using Molecular Dynamics: A Case Study with Broad-spectrum, Influenza A Antibodies
Cited by: 10
Author(s): William D. Lees, Lenka Stejskal, David S. Moss, Adrian J. Shepherd
Software Mentions: 2
Published: almost 8 years ago
10.1523/ENEURO.0102-15.2015
Robust and Rapid Air-Borne Odor Tracking without Casting
Cited by: 28
Author(s): Urvashi Bhattacharyya, Upinder S. Bhalla
Software Mentions: 2
Published: about 9 years ago
10.3390/brainsci10120991
Predictive Values of Location and Volumetric MRI Injury Patterns for Neurodevelopmental Outcomes in Hypoxic-Ischemic Encephalopathy Neonates
Cited by: 12
Author(s): Peter D. Chang, Daniel Chow, Anna Alber, Yen Kuang Lin, Young Ah Youn
Software Mentions: 2
Published: almost 4 years ago
10.1186/s13068-015-0379-8
Mechanism of lignin inhibition of enzymatic biomass deconstruction
Cited by: 183
Author(s): Josh V. Vermaas, Loukas Petridis, Xianghong Qi, Roland Schulz, Benjamin Lindner, Jeremy C. Smith
Software Mentions: 2
Published: almost 9 years ago
10.3389/fmolb.2020.00132
Time-Lagged t-Distributed Stochastic Neighbor Embedding (t-SNE) of Molecular Simulation Trajectories
Cited by: 25
Author(s): Vojtêch Spiwok, Pavel Kříž
Software Mentions: 2
Published: over 4 years ago
10.3389/fncir.2014.00084
GABAergic and glycinergic inhibitory synaptic transmission in the ventral cochlear nucleus studied in VGAT channelrhodopsin-2 mice
Cited by: 22
Author(s): Ruili Xie, Paul B. Manis
Software Mentions: 2
Published: over 10 years ago
10.7554/eLife.62386
Osmolarity-independent electrical cues guide rapid response to injury in zebrafish epidermis
Cited by: 24
Author(s): Andrew S. Kennard, Julie A. Theriot
Software Mentions: 2
Published: almost 4 years ago
10.7554/eLife.34176
Modulation of formin processivity by profilin and mechanical tension
Cited by: 38
Author(s): Luyan Cao, Mikaël Kerleau, Emiko Suzuki, Hugo Wioland, Sandy Jouet, Bérengère Guichard, Martin Lenz, Guillaume Romet-Lemonne, Antoine Jégou
Software Mentions: 2
Published: over 6 years ago
10.3390/biom8040131
Improving Chemical Autoencoder Latent Space and Molecular De Novo Generation Diversity with Heteroencoders
Cited by: 108
Author(s): Esben Jannik Bjerrum, Boris Sattarov
Software Mentions: 2
Published: about 6 years ago
10.1155/2020/6950576
Machine Learning Algorithms Identify Pathogen-Specific Biomarkers of Clinical and Metabolomic Characteristics in Septic Patients with Bacterial Infections
Cited by: 8
Author(s): Lingling Zheng, Fangqin Lin, Changxi Zhu, Guangjian Liu, Xiaohui Wu, Zhiyuan Wu, Jianbin Zheng, Huimin Xia, Yi Cai, Huiying Liang
Software Mentions: 2
Published: over 4 years ago
10.3389/fninf.2014.00073
PyNCS: a microkernel for high-level definition and configuration of neuromorphic electronic systems
Cited by: 14
Author(s): Fabio Stefanini, Emre Neftci, Sadique Sheik, Giacomo Indiveri
Software Mentions: 2
Published: about 10 years ago
10.1186/1745-6150-3-49
Activating and inhibiting connections in biological network dynamics
Cited by: 11
Author(s): Daniel McDonald, Laura Waterbury, Rob Knight, Meredith D. Betterton
Software Mentions: 2
Published: almost 16 years ago
10.3389/fninf.2012.00028
The UCLA multimodal connectivity database: a web-based platform for brain connectivity matrix sharing and analysis
Cited by: 107
Author(s): Jesse A. Brown, Jeffrey D. Rudie, Anita Bandrowski, John D. Van Horn, Susan Y. Bookheimer
Software Mentions: 2
Published: almost 13 years ago
10.3389/fonc.2018.00627
Data-Driven Discovery of Immune Contexture Biomarkers
Cited by: 19
Author(s): Lars Ole Schwen, Emilia Andersson, Konstanty Korski, Nick Weiss, Sabrina Haase, Fabien Gaire, Horst K. Hahn, André Homeyer, Oliver Grimm
Software Mentions: 2
Published: almost 6 years ago
10.3389/fpsyt.2019.00011
Morning Plasma Melatonin Differences in Autism: Beyond the Impact of Pineal Gland Volume
Cited by: 20
Author(s): Anna Maruani, Guillaume Dumas, Anita Beggiato, Nicolas Traut, Hugo Peyre, Alicia Cohen-Freoua, Frédérique Amsellem, Monique Elmaleh, David Germanaud, Jean‐Marie Launay, Thomas Bourgeron, Roberto Toro, Richard Delorme
Software Mentions: 2
Published: almost 6 years ago
10.3389/fpsyt.2020.510366
Interactive Psychometrics for Autism With the Human Dynamic Clamp: Interpersonal Synchrony From Sensorimotor to Sociocognitive Domains
Cited by: 5
Author(s): Florence Baillin, Aline Lefebvre, Amandine Pedoux, Yann Beauxis, Denis A. Engemann, Anna Maruani, Frédérique Amsellem, J. A. Scott Kelso, Thomas Bourgeron, Richard Delorme, Guillaume Dumas
Software Mentions: 2
Published: almost 4 years ago
10.3389/frobt.2019.00086
Combining Differential Kinematics and Optical Flow for Automatic Labeling of Continuum Robots in Minimally Invasive Surgery
Cited by: 4
Author(s): Benoît Rosa, Valentin Bordoux, Florent Nageotte
Software Mentions: 2
Published: about 5 years ago