pypi: numpy | Projects | Ecosyste.ms: Papers

10.1038/s42003-020-01419-w

Distortion of the bilayer and dynamics of the BAM complex in lipid nanodiscs
Cited by: 27
Author(s): M.G. Iadanza, Bob Schiffrin, Paul White, Matthew Watson, Jim E. Horne, A.J. Higgins, Antonio N. Calabrese, David J. Brockwell, Roman Tůma, Antreas C. Kalli, Sheena E. Radford, Neil A. Ranson
Software Mentions: 4
Published: almost 4 years ago

10.1186/s12859-019-2781-x

Computational enhancer prediction: evaluation and improvements
Cited by: 10
Author(s): Hasiba Asma, Marc S. Halfon
Software Mentions: 4
Published: over 5 years ago

10.3390/s20123520

Image-Processing-Based Low-Cost Fault Detection Solution for End-of-Line ECUs in Automotive Manufacturing
Cited by: 14
Author(s): Adrian Korodi, Denis Anitei, Alexandru Boitor, Ioan Silea
Software Mentions: 4
Published: over 4 years ago

10.1098/rsif.2019.0474

Modelling microbial communities using biochemical resource allocation analysis
Cited by: 13
Author(s): Suraj Sharma, Ralf Steuer
Software Mentions: 4
Published: about 5 years ago

10.2196/16117

Predicting Adverse Outcomes for Febrile Patients in the Emergency Department Using Sparse Laboratory Data: Development of a Time Adaptive Model
Cited by: 3
Author(s): Sungjoo Lee, Sungchul Hong, Won Chul, Kyunga Kim
Software Mentions: 4
Published: over 4 years ago

10.3390/s21093204

Hand Gesture Recognition Using EGaIn-Silicone Soft Sensors
Cited by: 10
Author(s): Sungtae Shin, Han Ul Yoon, Byung Hoon Yoo
Software Mentions: 4
Published: over 3 years ago

10.1364/OE.401117

Microscope-AOtools: a generalised adaptive optics implementation
Cited by: 10
Author(s): Nicholas Hall, Josh Titlow, Martin J. Booth, Ian M. Dobbie
Software Mentions: 4
Published: about 4 years ago

10.3390/sports9050068

An Analysis of Sport-Specific Pain Symptoms through Inter-Individual Training Differences in CrossFit
Cited by: 3
Author(s): Maria Alexandra Bernstorff, Norman Schumann, Nader Maai, Thomas A. Schildhauer, Matthias Königshausen
Software Mentions: 4
Published: over 3 years ago

10.1063/1.5132692

Liquid-like and rigid-body motions in molecular-dynamics simulations of a crystalline protein
Cited by: 14
Author(s): David C. Wych, James S. Fraser, David L. Mobley, Michael E. Wall
Software Mentions: 4
Published: about 5 years ago

10.1186/s40168-020-00909-7

Hill-based dissimilarity indices and null models for analysis of microbial community assembly
Cited by: 21
Author(s): Oskar Modin, Raquel Liébana, Soroush Saheb-Alam, Britt‐Marie Wilén, Carolina Suarez, Malte Hermansson, Frank Persson
Software Mentions: 4
Published: about 4 years ago

10.1186/s12859-021-04164-x

Comprehensive machine-learning-based analysis of microRNA–target interactions reveals variable transferability of interaction rules across species
Cited by: 5
Author(s): Gilad Ben Or, Isana Veksler-Lublinsky
Software Mentions: 4
Published: over 3 years ago

10.1186/s12859-019-2798-1

WASABI: a dynamic iterative framework for gene regulatory network inference
Cited by: 32
Author(s): Arnaud Bonnaffoux, Ulysse Herbach, Richard Angélique, Anissa Guillemin, Sandrine Gonin-Giraud, Pierre-Alexis Gros, Olivier Gandrillon
Software Mentions: 4
Published: over 5 years ago

10.1107/S2052252515006740

Serial snapshot crystallography for materials science with SwissFEL
Cited by: 18
Author(s): Catherine Dejoie, Stef Smeets, Christian Baerlocher, Nobumichi Tamura, Philip Pattison, R. Abela, Lynne B. McCusker
Software Mentions: 4
Published: over 9 years ago

10.1016/j.dib.2017.10.038

Programs for the calculation of the spinodal decomposition growth rate and the spinodal gap in nanoparticles
Cited by: 0
Author(s): Evgeny Pogorelov, Julia Kundin
Software Mentions: 4
Published: almost 7 years ago

10.3390/jof2010006

Proteomic Analysis of Pathogenic Fungi Reveals Highly Expressed Conserved Cell Wall Proteins
Cited by: 41
Author(s): Jackson Champer, James I. Ito, Karl V. Clemons, David A. Stevens, Markus Kalkum
Software Mentions: 4
Published: almost 9 years ago

10.1016/j.mex.2020.101208

Optimization methods for the imputation of missing values in Educational Institutions Data
Cited by: 0
Author(s): Davide Aureli, Renato Bruni, Cinzia Daraio
Software Mentions: 4
Published: almost 4 years ago

10.1371/journal.pone.0203839

Using wearable sensors to classify subject-specific running biomechanical gait patterns based on changes in environmental weather conditions
Cited by: 40
Author(s): Nizam Uddin Ahamed, Dylan Kobsar, Lauren C. Benson, Christian A. Clermont, Russell Kohrs, Sean T. Osis, Reed Ferber
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pone.0182056

Dynamics and asymmetry in the dimer of the norovirus major capsid protein
Cited by: 8
Author(s): Thibault Tubiana, Yves Boulard, Stéphane Bressanelli
Software Mentions: 4
Published: over 7 years ago

10.1371/journal.pone.0144782

SVM2Motif—Reconstructing Overlapping DNA Sequence Motifs by Mimicking an SVM Predictor
Cited by: 6
Author(s): Marina M.-C. Vidovic, Nico Görnitz, Klaus Robert Müller, Gunnar Rätsch, Marius Kloft
Software Mentions: 4
Published: almost 9 years ago

10.7717/peerj.10558

HiCEnterprise: identifying long range chromosomal contacts in Hi-C data
Cited by: 1
Author(s): Hanna Kranas, Irina Tuszyńska, Bartek Wilczyński
Software Mentions: 4
Published: over 3 years ago

10.1007/978-1-4939-9074-0_25

Sharing Programming Resources Between Bio* Projects
Cited by: 4
Author(s): Raoul Jean Pierre Bonnal, Andy Yates, Naohisa Goto, Laurent Gautier, Scooter Willis, Christopher J. Fields, Toshiaki Katayama, Pjotr Prins
Software Mentions: 4
Published: almost 6 years ago

10.1002/ece3.5567

Predicting species occurrences with habitat network models
Cited by: 1
Author(s): Damian O. Ortiz‐Rodríguez, Antoine Guisan, Rolf Holderegger, Maarten J. van Strien
Software Mentions: 4
Published: about 5 years ago

10.1007/s12020-020-02355-9

Mapping endocrine toxicity spectrum of immune checkpoint inhibitors: a disproportionality analysis using the WHO adverse drug reaction database, VigiBase
Cited by: 26
Author(s): Xuefeng Bai, Xiahong Lin, Kainan Zheng, Xiaoyu Chen, Xiaohong Wu, Yinqiong Huang, Yong Zhuang
Software Mentions: 4
Published: over 4 years ago

10.1371/journal.pone.0121233

Disease Specific Productivity of American Cancer Hospitals
Cited by: 0
Author(s): Jeffrey A. Goldstein, Vinay Prasad
Software Mentions: 4
Published: over 9 years ago

10.7717/peerj.7608

The effect of reverse transcription enzymes and conditions on high throughput amplicon sequencing of the 16S rRNA
Cited by: 2
Author(s): Adam Šťovíček, Smadar Cohen-Chalamish, Osnat Gillor
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0212189

Preprocessing 2D data for fast convex hull computations
Cited by: 2
Author(s): Oswaldo Cadenas, Graham M. Megson
Software Mentions: 4
Published: over 5 years ago

10.3390/metabo11070441

Hyperpolarized Dihydroxyacetone Is a Sensitive Probe of Hepatic Gluconeogenic State
Cited by: 7
Author(s): Mukundan Ragavan, Marc McLeod, Anthony Giacalone, Matthew E. Merritt
Software Mentions: 4
Published: over 3 years ago

10.1111/ejn.14292

Task‐dependent responses to muscle vibration during reaching
Cited by: 7
Author(s): Johannes Keyser, Rob Ramakers, W. Pieter Medendorp, Luc P. J. Selen
Software Mentions: 4
Published: almost 6 years ago

10.7554/eLife.11282

Population genomics of intrapatient HIV-1 evolution
Cited by: 205
Author(s): Fabio Zanini, Johanna Brodin, Lina Thebo, Christa Lanz, Göran Bratt, Jan Albert, Richard A. Neher
Software Mentions: 4
Published: almost 9 years ago

10.12688/f1000research.10783.2

A very simple, re-executable neuroimaging publication
Cited by: 10
Author(s): Samik Ghosh, Jean‐Baptiste Poline, David B. Keator, Yaroslav O. Halchenko, Adrian L. R. Thomas, Daniel Kessler, David N. Kennedy
Software Mentions: 4
Published: over 7 years ago

10.7554/eLife.32942

Single-cell transcriptional dynamics of flavivirus infection
Cited by: 126
Author(s): Fabio Zanini, Szu-Yuan Pu, Elena Bekerman, Shirit Einav, Stephen R. Quake
Software Mentions: 4
Published: almost 7 years ago

10.1186/s12859-020-3526-6

Substitution matrix based color schemes for sequence alignment visualization
Cited by: 3
Author(s): Patrick Kunzmann, Benjamin E. Mayer, Kay Hamacher
Software Mentions: 4
Published: over 4 years ago

10.3389/fncel.2021.668230

Impaired Adaptation and Laminar Processing of the Oddball Paradigm in the Primary Visual Cortex of Fmr1 KO Mouse
Cited by: 4
Author(s): Alexandr Pak, Samuel T. Kissinger, Alexander A. Chubykin
Software Mentions: 4
Published: over 3 years ago

10.15252/msb.20167233

A method for high‐throughput production of sequence‐verified <scp>DNA</scp> libraries and strain collections
Cited by: 36
Author(s): Justin D. Smith, Ulrich Schlecht, Weihong Xu, Sundari Suresh, Joe Horecka, Michael Proctor, Raeka S. Aiyar, Richard A. O. Bennett, Angela M. Chu, Yong Fuga Li, Kevin Roy, Ronald W. Davis, Lars M. Steinmetz, Richard W. Hyman, Sasha F. Levy, Robert P. St.Onge
Software Mentions: 4
Published: almost 8 years ago

10.1371/journal.pgen.1009774

A scalable Drosophila assay for clinical interpretation of human PTEN variants in suppression of PI3K/AKT induced cellular proliferation
Cited by: 4
Author(s): Payel Ganguly, Landiso Madonsela, Jesse T. Chao, Christopher Loewen, Timothy P. O’Connor, Esther M. Verheyen, Douglas W. Allan
Software Mentions: 4
Published: about 3 years ago

10.3389/fncom.2013.00112

Anisotropic connectivity implements motion-based prediction in a spiking neural network
Cited by: 10
Author(s): Bernhard Kaplan, Anders Lansner, Guillaume S. Masson, Laurent Perrinet
Software Mentions: 4
Published: almost 12 years ago

10.3389/fgene.2020.612840

Machine Learning Approaches Identify Genes Containing Spatial Information From Single-Cell Transcriptomics Data
Cited by: 3
Author(s): Phillipe Loher, Nestoras Karathanasis
Software Mentions: 4
Published: almost 4 years ago

10.1093/bib/bbw058

Graphics processing units in bioinformatics, computational biology and systems biology
Cited by: 53
Author(s): Marco S. Nobile, Paolo Cazzaniga, Andrea Tangherloni, Daniela Besozzi
Software Mentions: 4
Published: over 8 years ago

10.7554/eLife.31209

Mouse color and wavelength-specific luminance contrast sensitivity are non-uniform across visual space
Cited by: 59
Author(s): Daniel J. Denman, Jennifer Luviano, Douglas R. Ollerenshaw, Sissy Cross, Derric Williams, Michael A. Buice, Shawn R. Olsen, R. Clay Reid
Software Mentions: 4
Published: almost 7 years ago

10.1371/journal.pone.0009595

The Viscoelastic Properties of Passive Eye Muscle in Primates. III: Force Elicited by Natural Elongations
Cited by: 19
Author(s): Christian Quaia, Howard S. Ying, Lance M. Optican
Software Mentions: 4
Published: over 14 years ago

10.1371/journal.pone.0245368

Utilization of the Naranjo scale to evaluate adverse drug reactions at a free-standing children’s hospital
Cited by: 11
Author(s): Madhavi Murali, Sarah L. Suppes, Keith Feldman, Jennifer L. Goldman
Software Mentions: 4
Published: almost 4 years ago

10.3389/fncir.2014.00005

A spiking neural network model of self-organized pattern recognition in the early mammalian olfactory system
Cited by: 22
Author(s): Bernhard Kaplan, Anders Lansner
Software Mentions: 4
Published: almost 11 years ago

10.1371/journal.pone.0018539

Democratic Population Decisions Result in Robust Policy-Gradient Learning: A Parametric Study with GPU Simulations
Cited by: 13
Author(s): Paul Richmond, Lars Buesing, Michèle Giugliano, Eleni Vasilaki
Software Mentions: 4
Published: over 13 years ago

10.1155/2017/2794040

The Effect of Different Pollination on the Expression of Dangshan Su Pear MicroRNA
Cited by: 12
Author(s): Xi Cheng, Chongchong Yan, Jinyun Zhang, Chenhui Ma, Shumei Li, Qing Jin, Nan Zhang, Yunpeng Cao, Yi Lin, Yongping Cai
Software Mentions: 4
Published: almost 8 years ago

10.3389/fninf.2019.00064

The Dmipy Toolbox: Diffusion MRI Multi-Compartment Modeling and Microstructure Recovery Made Easy
Cited by: 44
Author(s): Rutger Fick, Demián Wassermann, Rachid Deriche
Software Mentions: 4
Published: about 5 years ago

10.1186/s12859-021-04329-8

DI2: prior-free and multi-item discretization of biological data and its applications
Cited by: 2
Author(s): Leonardo Alexandre, Rafael S. Costa, Rui Henriques
Software Mentions: 4
Published: about 3 years ago

10.1364/BOE.416737

Dual-view light-sheet imaging through a tilted glass interface using a deformable mirror
Cited by: 7
Author(s): Nikita Vladimirov, Friedrich Preußer, Jan Wiśniewski, Ziv Yaniv, Ravi A. Desai, Andrew Woehler, Stephan Preibisch
Software Mentions: 4
Published: over 3 years ago

10.1186/s12938-020-00795-y

Optimal length of R–R interval segment window for Lorenz plot detection of paroxysmal atrial fibrillation by machine learning
Cited by: 6
Author(s): Masaya Kisohara, Yoshio Masuda, Emi Yuda, Naonori Ueda, Junichiro Hayano
Software Mentions: 4
Published: over 4 years ago

10.1111/mec.15522

The role of introgression and ecotypic parallelism in delineating intraspecific conservation units
Cited by: 26
Author(s): Rebecca S. Taylor, Micheline Manseau, Rebekah L. Horn, Sonesinh Keobouasone, G. Brian Golding, Paul J. Wilson
Software Mentions: 4
Published: over 4 years ago

10.1371/journal.pcbi.1006077

New methods for computational decomposition of whole-mount in situ images enable effective curation of a large, highly redundant collection of Xenopus images
Cited by: 1
Author(s): Ilya Patrushev, Christina James-Zorn, Aldo Ciau-Uitz, Roger Patient, Michael J. Gilchrist
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pone.0119807

Protocols and Programs for High-Throughput Growth and Aging Phenotyping in Yeast
Cited by: 48
Author(s): Paul P. Jung, Nils Christian, Daniel P. Kay, Alexander Skupin, Carole L. Linster
Software Mentions: 4
Published: over 9 years ago

10.1371/journal.pcbi.1002952

Spatial Pattern Dynamics of 3D Stem Cell Loss of Pluripotency via Rules-Based Computational Modeling
Cited by: 31
Author(s): David W. White, Melissa A. Kinney, Todd C. McDevitt, Melissa L. Kemp
Software Mentions: 4
Published: over 11 years ago

10.1093/bioinformatics/btaa499

AlphaFamImpute: high-accuracy imputation in full-sib families from genotype-by-sequencing data
Cited by: 10
Author(s): Andrew Whalen, Gregor Gorjanc, John M. Hickey
Software Mentions: 4
Published: over 4 years ago

10.3389/fninf.2014.00015

Data management routines for reproducible research using the G-Node Python Client library
Cited by: 12
Author(s): Andrey Sobolev, Stoewer Adrian, Michael A. Pereira, Christian Johannes Kellner, Christian Garbers, Philipp L. Rautenberg, Thomas Wachtler
Software Mentions: 4
Published: over 10 years ago

10.3390/nu13093195

An Innovative Machine Learning Approach to Predict the Dietary Fiber Content of Packaged Foods
Cited by: 14
Author(s): Tazman Davies, Jimmy Chun Yu Louie, Tailane Scapin, Simone Pettigrew, Jason Wu, Matti Marklund, Daisy H. Coyle
Software Mentions: 4
Published: about 3 years ago

10.3390/bioengineering8020026

An Open-Source COVID-19 CT Dataset with Automatic Lung Tissue Classification for Radiomics
Cited by: 19
Author(s): Paolo Zaffino, Aldo Marzullo, Sara Moccia, Francesco Calimeri, Elena De Momi, Bernardo Bertucci, Pier Paolo Arcuri, Maria Francesca Spadea
Software Mentions: 4
Published: almost 4 years ago

10.1186/1756-0500-7-533

FASTQSim: platform-independent data characterization and in silico read generation for NGS datasets
Cited by: 35
Author(s): Anna Shcherbina
Software Mentions: 4
Published: almost 11 years ago

10.1186/1756-0500-7-806

DivA: detection of non-homologous and very divergent regions in protein sequence alignments
Cited by: 9
Author(s): Marie Lisandra Zepeda Mendoza, Sanne Nygaard, Rute R. da Fonseca
Software Mentions: 4
Published: about 10 years ago

10.1186/s40360-018-0282-6

eToxPred: a machine learning-based approach to estimate the toxicity of drug candidates
Cited by: 77
Author(s): Limeng Pu, Misagh Naderi, Tairan Liu, Hsiao-Chun Wu, Supratik Mukhopadhyay, Michał Bryliński
Software Mentions: 4
Published: almost 6 years ago

10.3389/fonc.2021.694102

CEUS-Based Radiomics Can Show Changes in Protein Levels in Liver Metastases After Incomplete Thermal Ablation
Cited by: 5
Author(s): Haiwei Bao, Ting Chen, Jianjun Zhu, Haiyang Xie, Fen Chen
Software Mentions: 4
Published: about 3 years ago

10.1186/s13015-015-0061-5

Interpretation and approximation tools for big, dense Markov chain transition matrices in population genetics
Cited by: 7
Author(s): Katja Reichel, Valentin Bahier, Cédric Midoux, Nicolas Parisey, Jean-Pierre Masson, Solenn Stoeckel
Software Mentions: 4
Published: almost 9 years ago

10.1371/journal.pone.0230327

Simulation model of CA1 pyramidal neurons reveal opposing roles for the Na+/Ca2+ exchange current and Ca2+-activated K+ current during spike-timing dependent synaptic plasticity
Cited by: 2
Author(s): Damien M. O’Halloran
Software Mentions: 4
Published: over 4 years ago

10.3389/fpsyt.2020.532623

Identification of Veterans With PTSD Based on EEG Features Collected During Sleep
Cited by: 3
Author(s): Swamy Laxminarayan, Chao Wang, Tatsuya Oyama, J David Cashmere, Anne Germain, Jaques Reifman
Software Mentions: 4
Published: about 4 years ago

10.1371/journal.pone.0163556

Separating Predicted and Perceived Sensory Consequences of Motor Learning
Cited by: 23
Author(s): Bernard Marius ’t Hart, Denise Y. P. Henriques
Software Mentions: 4
Published: about 8 years ago

10.3389/fpubh.2019.00081

Crowdbreaks: Tracking Health Trends Using Public Social Media Data and Crowdsourcing
Cited by: 41
Author(s): Martin Müller, Marcel Salathé
Software Mentions: 4
Published: over 5 years ago

10.1074/mcp.O117.067728

Covariation of Peptide Abundances Accurately Reflects Protein Concentration Differences
Cited by: 62
Author(s): Bo Zhang, Mohammad Pirmoradian, Roman A. Zubarev, Lukas Käll
Software Mentions: 4
Published: over 7 years ago

10.1534/g3.119.400757

Machine Learning Enables High-Throughput Phenotyping for Analyses of the Genetic Architecture of Bulliform Cell Patterning in Maize
Cited by: 9
Author(s): Pengfei Qiao, Lin Meng, Miguel Vasquez, Susanne Matschi, James Chamness, Matheus Baseggio, Laurie G. Smith, Mert R. Sabuncu, Michael A. Gore, Michael J. Scanlon
Software Mentions: 4
Published: almost 5 years ago

10.1186/1471-2202-13-S1-P13

A high-level, simulator independent, Python library for simulating small networks of multicompartmental neurons
Cited by: 0
Author(s): Michael Hull, David Willshaw
Software Mentions: 4
Published: over 12 years ago

10.1186/s12911-019-0805-0

Identifying clinically important COPD sub-types using data-driven approaches in primary care population based electronic health records
Cited by: 54
Author(s): Maria Pikoula, Jennifer K Quint, Francis Nissen, Harry Hemingway, Liam Smeeth, Spiros Denaxas
Software Mentions: 4
Published: over 5 years ago

10.3390/ijms22147415

Compatibility of Distinct Label-Free Proteomic Workflows in Absolute Quantification of Proteins Linked to the Oocyte Quality in Human Follicular Fluid
Cited by: 5
Author(s): Aleksandra Lewandowska, Anna Fel, Marcel Thiel, Paulina Czaplewska, Krzysztof Łukaszuk, Jacek R. Wiśniewski, Stanisław Ołdziej
Software Mentions: 4
Published: over 3 years ago

10.1186/s13059-015-0721-2

OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy
Cited by: 2,420
Author(s): David Emms, Steven Kelly
Software Mentions: 4
Published: over 9 years ago

10.1371/journal.pone.0238090

Simulation of the COVID-19 epidemic on the social network of Slovenia: Estimating the intrinsic forecast uncertainty
Cited by: 22
Author(s): Žiga Zaplotnik, Aleksandar Gavrić, Luka Medic
Software Mentions: 4
Published: about 4 years ago

10.1186/s13059-019-1829-6

RaGOO: fast and accurate reference-guided scaffolding of draft genomes
Cited by: 406
Author(s): Michael Alonge, Sebastian Soyk, S. Ramakrishnan, Xingang Wang, Sara Goodwin, Fritz J. Sedlazeck, Zachary B. Lippman, Michael C. Schatz
Software Mentions: 4
Published: about 5 years ago

10.1186/s12864-018-4912-6

Shoelaces: an interactive tool for ribosome profiling processing and visualization
Cited by: 13
Author(s): Åsmund Birkeland, Katarzyna Chyżyńska, Eivind Valen
Software Mentions: 4
Published: over 6 years ago

10.1186/s12864-021-07491-8

A first insight into the genome of Prototheca wickerhamii, a major causative agent of human protothecosis
Cited by: 8
Author(s): Zofia Bakuła, Paweł Siedlecki, Robert Gromadka, Jan Gawor, Agnieszka Gromadka, Jan J. Pomorski, Hanna Panagiotopoulou, Tomasz Jagielski
Software Mentions: 4
Published: over 3 years ago

10.1186/s12863-016-0388-z

Rare sex or out of reach equilibrium? The dynamics of F IS in partially clonal organisms
Cited by: 40
Author(s): Katja Reichel, Jean-Pierre Masson, Florent Malrieu, Sophie Arnaud‐Haond, Solenn Stoeckel
Software Mentions: 4
Published: over 8 years ago

10.1186/s12862-017-0999-7

Minimal tool set for a prokaryotic circadian clock
Cited by: 42
Author(s): Nicolas Schmelling, Robert Lehmann, Paushali Chaudhury, Christian Beck, Sonja‐Verena Albers, Ilka M. Axmann, Anika Wiegard
Software Mentions: 4
Published: over 7 years ago

10.1038/s41437-018-0177-8

MHC class I diversity predicts non-random mating in Chinese alligators (Alligator sinensis)
Cited by: 8
Author(s): Quan Han, Ru-Na Sun, Hai-Qiong Yang, Zhenwei Wang, Qiu‐Hong Wan, Sheng‐Guo Fang
Software Mentions: 4
Published: almost 6 years ago

10.1002/hbm.25144

High‐density intracranial recordings reveal a distinct site in anterior dorsal precentral cortex that tracks perceived speech
Cited by: 10
Author(s): Julia Berezutskaya, Clarissa Baratin, Zachary V. Freudenburg, N.F. Ramsey
Software Mentions: 4
Published: over 4 years ago

10.1109/tbdata.2020.3035935

COVID-19-CT-CXR: A Freely Accessible and Weakly Labeled Chest X-Ray and CT Image Collection on COVID-19 From Biomedical Literature
Cited by: 47
Author(s): Yifan Peng, Yuxing Tang, Sungwon Lee, Yingying Zhu, Ronald M. Summers, Zhiyong Lu
Software Mentions: 4
Published: over 3 years ago

10.1016/j.molcel.2019.11.010

Functional Translatome Proteomics Reveal Converging and Dose-Dependent Regulation by mTORC1 and eIF2α
Cited by: 70
Author(s): Kevin Klann, Georg Tascher, Christian Münch
Software Mentions: 4
Published: almost 5 years ago

10.1107/S1600576717016600

CAPOW: a standalone program for the calculation of optimal weighting parameters for least-squares crystallographic refinements
Cited by: 0
Author(s): Natalie T. Johnson, Holger Ott, Michael R. Probert
Software Mentions: 4
Published: almost 7 years ago

10.1371/journal.pcbi.1006844

A new clustering and nomenclature for beta turns derived from high-resolution protein structures
Cited by: 50
Author(s): Maxim V. Shapovalov, Slobodan Vučetić, Roland L. Dunbrack
Software Mentions: 4
Published: over 5 years ago

10.1186/1471-2105-15-180

PBHoney: identifying genomic variants via long-read discordance and interrupted mapping
Cited by: 135
Author(s): Adam C. English, William Salerno, Jeffrey G. Reid
Software Mentions: 4
Published: over 10 years ago

10.1007/s10858-019-00265-1

Using Deep Neural Networks to Reconstruct Non-uniformly Sampled NMR Spectra
Cited by: 58
Author(s): D. Flemming Hansen
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0233336

Artificial intelligence may offer insight into factors determining individual TSH level
Cited by: 7
Author(s): Prasanna Santhanam, Tanmay Nath, Faiz Khan Mohammad, Rexford S. Ahima
Software Mentions: 4
Published: over 4 years ago

10.3390/cancers12040825

Pan-Cancer Analysis of Mitochondria Chaperone-Client Co-Expression Reveals Chaperone Functional Partitioning
Cited by: 8
Author(s): Geut Galai, Hila Ben-David, Liron Levin, Martin F. Orth, Thomas Grünewald, Shai Pilosof, Shimon Berstein, Barak Rotblat
Software Mentions: 4
Published: over 4 years ago

10.1186/s12915-020-00911-3

CloneSifter: enrichment of rare clones from heterogeneous cell populations
Cited by: 11
Author(s): David Feldman, FuNien Tsai, Anthony J. Garrity, Ryan O’Rourke, Lisa Brenan, Patricia Ho, Elizabeth M. Gonzalez, Silvana Konermann, Cory M. Johannessen, Rameen Beroukhim, Pratiti Bandopadhayay, Paul C. Blainey
Software Mentions: 4
Published: almost 4 years ago

10.1007/s10278-017-9965-6

Toolkits and Libraries for Deep Learning
Cited by: 110
Author(s): Bradley J. Erickson, Panagiotis Korfiatis, Zeynettin Akkus, Timothy L. Kline, Kenneth A. Philbrick
Software Mentions: 4
Published: over 7 years ago

10.1186/s40337-018-0191-5

Literary reading and eating disorders: survey evidence of therapeutic help and harm
Cited by: 11
Author(s): Emily T. Troscianko
Software Mentions: 4
Published: over 6 years ago

10.3390/cancers13030576

Cooperative Blockade of CK2 and ATM Kinases Drives Apoptosis in VHL-Deficient Renal Carcinoma Cells through ROS Overproduction
Cited by: 17
Author(s): Sofía Giacosa, Catherine Pillet, Irinka Séraudie, Laurent Guyon, Yann Wallez, Caroline Roelants, Christophe Battail, Bertrand Evrard, Frédéric Chalmel, Caroline Barette, Emmanuelle Soleilhac, Marie-Odile Fauvarque, Q. Franquet, Clément Sarrazin, N. Peilleron, G. Fiard, Jean-Alexandre Long, Jean‐Luc Descotes, Claude Cochet, Odile Filhol
Software Mentions: 4
Published: almost 4 years ago

10.7717/peerj-cs.165

Tools4MSP: an open source software package to support Maritime Spatial Planning
Cited by: 17
Author(s): Stefano Menegon, Alessandro Sarretta, Daniel Depellegrin, Giulio Farella, Chiara Venier, Andrea Barbanti
Software Mentions: 4
Published: about 6 years ago

10.1002/pro.3986

In‐depth interrogation of protein thermal unfolding data with <scp>MoltenProt</scp>
Cited by: 25
Author(s): Vadim Kotov, Georg Mlynek, Oliver Vesper, Marina Pletzer, Jiri Wald, Celso M. Teixeira-Duarte, Hervé Célia, María García-Alai, Stephan Nußberger, Susan K. Buchanan, J.H. Morais-Cabral, Christian Löw, Kristina Djinović-Carugo, Thomas C. Marlovits
Software Mentions: 4
Published: about 4 years ago

Projects: pypi: numpy

Papers Mentioning numpy 832