Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: nibabel

https://packages.ecosyste.ms/registries/pypi.org/packages/nibabel

Access a multitude of neuroimaging data formats
40 versions
Latest release: over 1 year ago
284 dependent packages
269,338 downloads last month

Papers Mentioning nibabel 15

10.3389/fninf.2013.00052

A framework for streamlining research workflow in neuroscience and psychology
Cited by: 12
Author(s): Jonas Kubilius
Software Mentions: 25
Published: almost 11 years ago

PHOTONAI—A Python API for rapid machine learning model development
Cited by: 8
Author(s): Ramona Leenings, Nils R. Winter, Lucas Plagwitz, Vincent Holstein, Jan Ernsting, Kelvin Sarink, L. Fisch, Jakob Steenweg, Leon Kleine-Vennekate, Julian Gebker, Daniel Emden, Dominik Grotegerd, Nils Opel, Benjamin Risse, Xiaoyi Jiang, Udo Dannlowski, Tim Hahn
Software Mentions: 15
Published: over 3 years ago

10.3389/fnins.2014.00067

Flexible multivariate hemodynamics fMRI data analyses and simulations with PyHRF
Cited by: 11
Author(s): Vincent Thomas, Solveig Badillo, Laurent Risser, Lotfi Chaâri, Christine Bakhous, Florence Forbes, Philippe Ciuciu
Software Mentions: 14
Published: over 10 years ago

10.1016/j.cmpb.2018.01.025

NiftyNet: a deep-learning platform for medical imaging
Cited by: 429
Author(s): Eli Gibson, Wenqi Li, Carole H. Sudre, Lucas Fidon, Dzhoshkun I. Shakir, Guotai Wang, Zach Eaton-Rosen, Robert Gray, Tom Doel, Yipeng Hu, T. Whyntie, Parashkev Nachev, Marc Modat, Dean C. Barratt, Sébastien Ourselin, M. Jorge Cardoso, Tom Vercauteren
Software Mentions: 9
Published: over 6 years ago

10.3389/fninf.2016.00036

A Multi-facetted Visual Analytics Tool for Exploratory Analysis of Human Brain and Function Datasets
Cited by: 18
Author(s): Diego A. Angulo, Cyril Schneider, James H. Oliver, Nathalie Charpak, José Tiberio Hernández
Software Mentions: 8
Published: over 8 years ago

10.1038/s41597-021-00870-6

The Amsterdam Open MRI Collection, a set of multimodal MRI datasets for individual difference analyses
Cited by: 45
Author(s): Lukas Snoek, Maite M. van der Miesen, Tinka Beemsterboer, Andries van der Leij, Annemarie Eigenhuis, H. Steven Scholte
Software Mentions: 8
Published: over 3 years ago

10.1186/s13550-020-00671-9

18F-FDG PET and DCE kinetic modeling and their correlations in primary NSCLC: first voxel-wise correlative analysis of human simultaneous [18F]FDG PET-MRI data
Cited by: 6
Author(s): Florent L. Besson, Brice Fernandez, Sylvain Faure, Olaf Mercier, Andrei Seferian, Xavier Mignard, Sacha Mussot, C. Le Péchoux, Caroline Caramella, Angela Botticella, Antonin Lévy, Florence Parent, Sophie Bulifon, David Montani, Délphine Mitilian, Élie Fadel, David Planchard, Benjamin Besse, Maria-Rosa Ghigna-Bellinzoni, Claude Comtat, Vincent Lebon, Emmanuel Durand
Software Mentions: 7
Published: over 4 years ago

10.3389/fninf.2020.00024

Sammba-MRI: A Library for Processing SmAll-MaMmal BrAin MRI Data in Python
Cited by: 11
Author(s): Marina Célestine, Nachiket A. Nadkarni, Clément M. Garin, Salma Bougacha, Marc Dhénain
Software Mentions: 7
Published: over 4 years ago

10.3389/fninf.2017.00021

Reproducible Large-Scale Neuroimaging Studies with the OpenMOLE Workflow Management System
Cited by: 8
Author(s): Jonathan Passerat–Palmbach, Romain Reuillon, Mathieu Leclaire, Antonios Makropoulos, Emma C. Robinson, Sarah Parisot, Daniel Rueckert
Software Mentions: 6
Published: over 7 years ago

10.3390/brainsci11091141

Automatic Segmentation of the Olfactory Bulb
Cited by: 4
Author(s): Dmitriy Desser, Francisca Assunção, Yan Xing, Victor Alves, Henrique M. Fernandes, Thomas Hummel
Software Mentions: 4
Published: about 3 years ago

10.3389/fnins.2014.00198

Merging functional and structural properties of the monkey auditory cortex
Cited by: 15
Author(s): Olivier Joly, Sarah Baumann, Fabien Balezeau, Alexander Thiele, Timothy D. Griffiths
Software Mentions: 3
Published: over 10 years ago

10.1016/j.dcn.2019.100630

BOLD signal variability and complexity in children and adolescents with and without autism spectrum disorder
Cited by: 35
Author(s): Amanda Easson, Anthony R. McIntosh
Software Mentions: 3
Published: over 5 years ago

10.7554/eLife.03256

The topography of frequency and time representation in primate auditory cortices
Cited by: 39
Author(s): Sarah Baumann, Olivier Joly, Adrian Rees, Christopher I. Petkov, Lijun Sun, Alexander Thiele, Timothy D. Griffiths
Software Mentions: 3
Published: almost 10 years ago

10.7554/eLife.55335

Hippocampal and cortical mechanisms at retrieval explain variability in episodic remembering in older adults
Cited by: 32
Author(s): Alexandra N. Trelle, Valerie A. Carr, Scott A. Guerin, Monica K Thieu, Manasi Jayakumar, Wanjia Guo, Ayesha Nadiadwala, Nicole K. Corso, Madison P Hunt, Celia Litovsky, Natalie Tanner, Gayle K. Deutsch, Jeffrey D. Bernstein, Marc Harrison, Anna M. Khazenzon, Jiefeng Jiang, Sharon J. Sha, Carolyn A. Fredericks, Brian K. Rutt, Elizabeth C. Mormino, Geoffrey A. Kerchner, Anthony D. Wagner
Software Mentions: 2
Published: over 4 years ago

10.3389/fnhum.2016.00511

The Neural Bases of Disgust for Cheese: An fMRI Study
Cited by: 14
Author(s): Jean-Pierre Royet, David Meunier, Nicolas Torquet, Anne-Marie Mouly, Tao Jiang
Software Mentions: 1
Published: about 8 years ago