Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: lattice
https://packages.ecosyste.ms/registries/pypi.org/packages/lattice
A framework for developing data models, including schema development and documentation.
6 versions
Latest release: about 6 years ago
62 downloads last month
Papers Mentioning lattice 251
10.3389/fnhum.2017.00454
Cold-Blooded Attention: Finger Temperature Predicts Attentional PerformanceCited by: 5
Author(s): Rodrigo C. Vergara, Cristóbal Moënne‐Loccoz, Pedro Maldonado
Software Mentions: 7
Published: about 7 years ago
10.1002/ece3.5622
Consequences of marine barriers for genetic diversity of the coral‐specialist yellowbar angelfish from the Northwestern Indian OceanCited by: 17
Author(s): Felipe Torquato, Pedro Range, Radhouane Ben‐Hamadou, Eva Egelyng Sigsgaard, Philip Francis Thomsen, Rodrigo Riera, Michael L. Berumen, John A. Burt, David A. Feary, Alyssa Marshell, Daniele D’Agostino, Joseph D. DiBattista, Peter Rask Møller
Software Mentions: 7
Published: about 5 years ago
10.1371/journal.pntd.0005729
Dengue prediction by the web: Tweets are a useful tool for estimating and forecasting Dengue at country and city levelCited by: 70
Author(s): Cecilia Marques-Toledo, Carolin Marlen Degener, Livia Vinhal, Giovanini Evelim Coelho, Wagner Meira, Cláudia Torres Codeço, Mauro Martins Teixeira
Software Mentions: 7
Published: over 7 years ago
10.3389/fonc.2020.01591
An Ultrasound Radiomics Nomogram for Preoperative Prediction of Central Neck Lymph Node Metastasis in Papillary Thyroid CarcinomaCited by: 38
Author(s): Shichong Zhou, Tong‐Tong Liu, Jin Zhou, Yao Qi Huang, Yi Guo, Jinhua Yu, Yuan‐Yuan Wang, Cai Chang
Software Mentions: 7
Published: about 4 years ago
10.1038/s41598-017-15712-y
Genome-wide analyses of long noncoding RNA expression profiles in lung adenocarcinomaCited by: 20
Author(s): Peng Zhang, Jun Wang, Bin Shan, Fulai Yuan, Bin Li, Yeping Dong, Wei Peng, Weisong Shi, Yuanda Cheng, Yang Gao, Chunfang Zhang, Chaojun Duan
Software Mentions: 7
Published: about 7 years ago
10.1186/s12859-015-0830-7
DHOEM: a statistical simulation software for simulating new markers in real SNP marker dataCited by: 0
Author(s): Laval Jacquin, Tuong-Vi Cao, Cécile Grenier, Nourollah Ahmadi
Software Mentions: 7
Published: almost 9 years ago
10.1002/cam4.343
The transcriptomic profile of ovarian cancer gradingCited by: 2
Author(s): Cindy Q. Yao, Francis Nguyen, Syed Haider, Maud H.W. Starmans, Philippe Lambin, Paul C. Boutros
Software Mentions: 7
Published: about 10 years ago
10.1038/s41598-020-75723-0
Veteran trees are a source of natural enemiesCited by: 9
Author(s): Ross Wetherbee, Tone Birkemoe, Anne Sverdrup‐Thygeson
Software Mentions: 7
Published: about 4 years ago
10.1371/journal.pgen.1008482
A transcriptome-based signature of pathological angiogenesis predicts breast cancer patient survivalCited by: 12
Author(s): Rodrigo Guarischi-Sousa, Jhonatas Sirino Monteiro, Lilian Costa Alecrim, Jussara S. Michaloski, Laura Beatriz da Silva Cardeal, Elisa Napolitano Ferreira, Dirce Maria Carraro, Diana Noronha Nunes, Emmanuel Dias-Neto, Jüri Reimand, Paul C. Boutros, João Carlos Setúbal, Ricardo J. Giordano
Software Mentions: 7
Published: almost 5 years ago
10.1186/s13071-015-1086-9
Spatiotemporal variation of mosquito diversity (Diptera: Culicidae) at places with different land-use types within a neotropical montane cloud forest matrixCited by: 52
Author(s): Carlos Antonio Abella-Medrano, Sergio Ibáñez-Bernal, Ian MacGregor-Fors, Diego Santiago‐Alarcon
Software Mentions: 7
Published: about 9 years ago
10.3390/antiox10030448
Intra-Individual Variation and Reliability of Biomarkers of the Antioxidant Defense System by Considering Dietary and Lifestyle Factors in Premenopausal WomenCited by: 2
Author(s): Alexandra Jungert, Jan Frank
Software Mentions: 7
Published: over 3 years ago
10.1098/rsos.160293
Reflections of the social environment in chimpanzee memory: applying rational analysis beyond humansCited by: 5
Author(s): Jeffrey R. Stevens, Julian N. Marewski, Lael J. Schooler, Ian C. Gilby
Software Mentions: 7
Published: over 8 years ago
10.1186/s13075-016-1120-0
A discrete cluster of urinary biomarkers discriminates between active systemic lupus erythematosus patients with and without glomerulonephritisCited by: 25
Author(s): Carolina Landolt-Marticorena, Stephenie D. Prokopec, Stacey Morrison, Babak Noamani, Dennisse Bonilla, Heather N. Reich, James W. Scholey, Carmen Ávila-Casado, Paul R. Fortin, Paul C. Boutros, Joan E. Wither
Software Mentions: 7
Published: about 8 years ago
10.1371/journal.pone.0131276
Geo-Referenced, Abundance Calibrated Ocean Distribution of Chinook Salmon (Oncorhynchus tshawytscha) Stocks across the West Coast of North AmericaCited by: 20
Author(s): M. Renee Bellinger, Michael Banks, Sarah J. Bates, Eric D. Crandall, John Carlos Garza, Gilbert Sylvia, Peter W. Lawson
Software Mentions: 7
Published: over 9 years ago
10.1186/s12859-019-2610-2
BPG: Seamless, automated and interactive visualization of scientific dataCited by: 55
Author(s): Christine P’ng, Jeffrey Green, Lauren C. Chong, Daryl Waggott, Stephenie D. Prokopec, Mehrdad Shamsi, Francis Nguyen, Davina Mak, Felix Lam, Marco A. Albuquerque, Yaoguo Wu, Esther Jung, Maud H.W. Starmans, Michelle Chan-Seng-Yue, Cindy Q. Yao, Bianca Liang, Emilie Lalonde, Syed Haider, Nicole A. Simone, Dorota H. Sendorek, Kenneth C. Chu, Nathalie C. Moon, Natalie S. Fox, Michal R. Grzadkowski, Nicholas J. Harding, Clement Fung, Amanda R. Murdoch, Kathleen E. Houlahan, Jianxin Wang, David R. Garcia, Richard de Borja, Ren Sun, Xihui Lin, Gregory M. Chen, Aileen Lu, Yu-Jia Shiah, Amin Zia, Ryan Kearns, Paul C. Boutros
Software Mentions: 7
Published: almost 6 years ago
10.3389/fmicb.2021.640386
The Molecular Information About Deadwood Bacteriomes Partly Depends on the Targeted Environmental DNACited by: 9
Author(s): Maraike Probst, Judith Ascher‐Jenull, Heribert Insam, María Gómez-Brandòn
Software Mentions: 6
Published: over 3 years ago
10.18632/aging.202186
Systematic construction and validation of an epithelial–mesenchymal transition risk model to predict prognosis of lung adenocarcinomaCited by: 10
Author(s): Yunliang Tang, Yanxia Jiang, Qi Cheng, Jiao Wang, Zhenguo Zeng
Software Mentions: 6
Published: almost 4 years ago
10.1186/1471-2164-10-439
Relative power and sample size analysis on gene expression profiling dataCited by: 64
Author(s): Maarten van Iterson, Peter A C ‘t Hoen, Paola Pedotti, Guido Hooiveld, Johan T. den Dunnen, Gjb van Ommen, JM Boer, R.M. Menezes
Software Mentions: 6
Published: about 15 years ago
10.1186/s12864-015-1840-6
Male and female mice show significant differences in hepatic transcriptomic response to 2,3,7,8-tetrachlorodibenzo-p-dioxinCited by: 38
Author(s): Jamie Lee, Stephenie D. Prokopec, John D. Watson, Ren Sun, Raimo Pohjanvirta, Paul C. Boutros
Software Mentions: 6
Published: over 9 years ago
10.1186/1471-2164-15-1053
Cross-species transcriptomic analysis elucidates constitutive aryl hydrocarbon receptor activityCited by: 10
Author(s): Ren Sun, Lauren C. Chong, Trent T. Simmons, Kathleen E. Houlahan, Stephenie D. Prokopec, John D. Watson, Ivy D. Moffat, Sanna Lensu, Jere Lindén, Christine P’ng, Allan B. Okey, Raimo Pohjanvirta, Paul C. Boutros
Software Mentions: 6
Published: almost 10 years ago
10.1186/s12917-020-02332-4
Dietary supplementation of micro-encapsulated sodium butyrate in healthy horses: effect on gut histology and immunohistochemistry parametersCited by: 7
Author(s): Wendy Wambacq, D.A. van Doorn, Pauline Rovers-Paap, Richard Ducatelle, Lieven Vlaminck, Marta Ribeiro Alves Lourenço, Myriam Hesta
Software Mentions: 6
Published: over 4 years ago
10.1111/mec.14893
Geospatial variation in co‐occurrence networks of nitrifying microbial guildsCited by: 39
Author(s): Christopher M. Jones, Sara Hallin
Software Mentions: 6
Published: about 6 years ago
10.1186/s13071-015-1250-2
Ecology and spatiotemporal dynamics of sandflies in the Mediterranean Languedoc region (Roquedur area, Gard, France)Cited by: 36
Author(s): Jorian Prudhomme, Nil Rahola, Céline Toty, Cécile Cassan, David Roiz, Baptiste Vergnes, Magalie Thierry, J. A. Rioux, Bülent Alten, Denis Sereno, Anne‐Laure Bañuls
Software Mentions: 6
Published: almost 9 years ago
10.7717/peerj.11132
Bloom evenness modulates the influence of bloom abundance on insect community structure in suburban gardensCited by: 4
Author(s): Elizabeth Braatz, Zachariah J. Gezon, Kristin Rossetti, Lily Maynard, Jonathan S. Bremer, Geena M. Hill, Marissa A. Streifel, Jaret C. Daniels
Software Mentions: 6
Published: over 3 years ago
10.1371/journal.pntd.0009500
Lay attitudes and misconceptions and their implications for the control of brucellosis in an agro-pastoral community in Kilombero district, TanzaniaCited by: 6
Author(s): Caroline M. Mburu, Salome A. Bukachi, Kathrin H. Tokpa, Gilbert Fokou, Khamati Shilabukha, Mangi J. Ezekiel, Bassirou Bonfoh, Rudovick Kazwala, Katharina Kreppel
Software Mentions: 6
Published: over 3 years ago
10.1371/journal.pone.0219747
2,3,7,8-Tetrachlorodibenzo-p-dioxin modifies alternative splicing in mouse liverCited by: 5
Author(s): Ana B. Villaseñor-Altamirano, John D. Watson, Stephenie D. Prokopec, Cindy Q. Yao, Paul C. Boutros, Raimo Pohjanvirta, Jesús Valdés‐Flores, Guillermo Elizondo
Software Mentions: 6
Published: over 5 years ago
10.1371/journal.pone.0248756
Veteran trees have divergent effects on beetle diversity and wood decompositionCited by: 2
Author(s): Ross Wetherbee, Tone Birkemoe, Ryan C. Burner, Anne Sverdrup‐Thygeson
Software Mentions: 6
Published: over 3 years ago
10.1371/journal.pone.0106196
A Multi-Compartment Single and Multiple Dose Pharmacokinetic Comparison of Rectally Applied Tenofovir 1% Gel and Oral Tenofovir Disoproxil FumarateCited by: 27
Author(s): Kuo Hsiung Yang, Craig W. Hendrix, Namandjé N. Bumpus, Julie Elliott, Karen Tanner, Christine Mauck, Ross D. Cranston, Ian McGowan, Nicola Richardson-Harman, Peter A. Anton, Angela D. M. Kashuba
Software Mentions: 6
Published: about 10 years ago
10.1371/journal.pone.0221355
Effects of road salt on microbial communities: Halophiles as biomarkers of road salt pollutionCited by: 17
Author(s): Wolf T. Pecher, M. Emad Al Madadha, Priya DasSarma, Folasade Ekulona, Eric J. Schott, Kelli Crowe, Bojana Stojkovic Gut, Shiladitya DasSarma
Software Mentions: 6
Published: about 5 years ago
10.1371/journal.pone.0121349
Diagnostic Value of Run Chart Analysis: Using Likelihood Ratios to Compare Run Chart Rules on Simulated Data SeriesCited by: 27
Author(s): Jacob Anhøj
Software Mentions: 6
Published: over 9 years ago
10.1371/journal.pone.0053544
Visualising the Cross-Level Relationships between Pathological and Physiological Processes and Gene Expression: Analyses of Haematological DiseasesCited by: 13
Author(s): M. Ono, Reiko Tanaka, Manabu Kano, Toshio Sugiman
Software Mentions: 6
Published: almost 12 years ago
10.1371/journal.pone.0034846
Visualization and Curve-Parameter Estimation Strategies for Efficient Exploration of Phenotype Microarray KineticsCited by: 152
Author(s): Lea A. I. Vaas, Johannes Sikorski, Victoria Michael, Markus Göker, Hans‐Peter Klenk
Software Mentions: 6
Published: over 12 years ago
10.1371/journal.pone.0219986
Year-round distribution, activity patterns and habitat use of a poorly studied pelagic seabird, the fluttering shearwater Puffinus gaviaCited by: 5
Author(s): Martin Berg, Jannie Fries Linnebjerg, Graeme A. Taylor, Stefanie M. H. Ismar-Rebitz, Mike Bell, Chris P. Gaskin, Susanne Åkesson, Matt J. Rayner
Software Mentions: 6
Published: over 5 years ago
10.12688/f1000research.10232.1
Approaches to R education in Canadian universitiesCited by: 2
Author(s): M. A. Carson, Nathan Basiliko
Software Mentions: 6
Published: almost 8 years ago
10.3389/fnagi.2014.00146
Differential behavioral and physiological effects of anodal transcranial direct current stimulation in healthy adults of younger and older ageCited by: 64
Author(s): Kirstin Heise, Martina Niehoff, Jan Feldheim, Gianpiero Liuzzi, Christian Gerloff, Friedhelm C. Hummel
Software Mentions: 6
Published: over 10 years ago
10.3389/fimmu.2017.00246
Host Genetic Background Strongly Affects Pulmonary microRNA Expression before and during Influenza A Virus InfectionCited by: 19
Author(s): Matthias Preuße, Klaus Schughart, Frank Peßler
Software Mentions: 6
Published: over 7 years ago
10.3389/fpsyg.2021.672301
Differential Effects of Ethical Education, Physical Hatha Yoga, and Mantra Meditation on Well-Being and Stress in Healthy Participants—An Experimental Single-Case StudyCited by: 11
Author(s): Karin Matko, Peter Sedlmeier, Holger C. Bringmann
Software Mentions: 6
Published: over 3 years ago
10.3389/fvets.2020.00248
A Participatory Investigation of Bovine Health and Production Issues in PakistanCited by: 11
Author(s): Abdul Ghafar, David McGill, Mark Stevenson, Muhammad Badar, Aijaz Kumbher, Hassan Warriach, Robin B. Gasser, Abdul Jabbar
Software Mentions: 6
Published: over 4 years ago
10.1186/1742-9994-12-S1-S9
Personality over ontogeny in zebra finches: long-term repeatable traits but unstable behavioural syndromesCited by: 59
Author(s): Yvonne Wuerz, Oliver Krüger
Software Mentions: 6
Published: almost 10 years ago
10.1007/s10120-019-01027-6
The clinical value and usage of inflammatory and nutritional markers in survival prediction for gastric cancer patients with neoadjuvant chemotherapy and D2 lymphadenectomyCited by: 45
Author(s): Ziyu Li, Shuangxi Li, Xiangji Ying, Lianhai Zhang, Fei Shan, Yongning Jia, Jiafu Ji
Software Mentions: 6
Published: almost 5 years ago
10.1186/s40104-020-00465-y
Effects of supplementation of green tea extract on the milk performance of peripartal dairy cows and the expression of stress response genes in the liverCited by: 6
Author(s): Denise K. Geßner, Corinna Brock, Lena M. Hof, Erika Most, Christian Koch, Klaus Eder
Software Mentions: 6
Published: over 4 years ago
10.3390/jcm8101524
Rethinking Lupus Nephritis Classification on a Molecular LevelCited by: 16
Author(s): Salem Almaani, Stephenie D. Prokopec, Jianying Zhang, Lianbo Yu, Carmen Ávila-Casado, Joan E. Wither, James W. Scholey, Valeria Albertón, Ana Malvar, Samir Parikh, Paul C. Boutros, Brad H. Rovin, Heather N. Reich
Software Mentions: 6
Published: about 5 years ago
10.1098/rsos.160152
Does density influence relative growth performance of farm, wild and F <sub>1</sub> hybrid Atlantic salmon in semi-natural and hatchery common garden conditions?Cited by: 10
Author(s): Alison C. Harvey, Gareth Juleff, Gary R. Carvalho, Martin I. Taylor, Monica Favnebøe Solberg, Simon Creer, Lise Dyrhovden, Ivar Helge Matre, Kevin A. Glover
Software Mentions: 6
Published: over 8 years ago
10.1038/s41598-017-01498-6
An optimal distance cutoff for contact-based Protein Structure Networks using side-chain centers of massCited by: 64
Author(s): Juan Salamanca Viloria, Maria Francesca Allega, Matteo Lambrughi, Elena Papaleo
Software Mentions: 6
Published: over 7 years ago
10.1038/s41598-019-43333-0
The efficiency of a new automated mosquito larval counter and its impact on larval survivalCited by: 11
Author(s): Wadaka Mamaï, Hamidou Maïga, Miklós Gárdos, Péter Bán, Nanwintoum Séverin Bimbilé Somda, Anna Konczal, Thomas Wallner, Andrew G. Parker, Fabrizio Balestrino, Hanano Yamada, J. Gilles, Jérémy Bouyer
Software Mentions: 6
Published: over 5 years ago
10.1038/s41598-020-63389-7
Metabotropic glutamate receptor 5 in bulimia nervosaCited by: 11
Author(s): Yoan Mihov, Valérie Treyer, Funda Akkus, Erika Toman, Gabriella Milos, Simon M. Ametamey, Anass Johayem, Gregor Hasler
Software Mentions: 6
Published: over 4 years ago
10.3390/toxics9070164
A Multidisciplinary Approach for the Assessment of Origin, Fate and Ecotoxicity of Metal(loid)s from Legacy Coal Mine TailingsCited by: 2
Author(s): Honorine Gauthier-Manuel, Diane Radola, Flavien Choulet, Martine Buatier, Raphaël Vauthier, Tatiana Morvan, Walter Chavanne, Frédéric Gimbert
Software Mentions: 6
Published: over 3 years ago
10.1155/2018/5463762
Adiponectin and Leptin at Early Pregnancy: Association to Actual Glucose Disposal and Risk for GDM—A Prospective Cohort StudyCited by: 25
Author(s): Latife Bozkurt, Christian Göbl, Sabina Baumgartner‐Parzer, Anton Luger, Giovanni Pacini, Alexandra Kautzky–Willer
Software Mentions: 6
Published: over 6 years ago
10.1186/1476-072X-12-10
Identifying landscape features associated with Rift Valley fever virus transmission, Ferlo region, Senegal, using very high spatial resolution satellite imageryCited by: 27
Author(s): Valérie Soti, Véronique Chevalier, Jonathan Maura, Agnès Bégué, Camille Lelong, Renaud Lancelot, Yaya Thiongane, Annelise Tran
Software Mentions: 6
Published: almost 12 years ago
10.1007/s00442-021-04910-1
Diversity and functional structure of soil animal communities suggest soil animal food webs to be buffered against changes in forest land useCited by: 14
Author(s): Melanie M. Pollierer, Bernhard Klarner, David Ott, Christoph Digel, Roswitha B. Ehnes, Bernhard Eitzinger, Georgia Erdmann, Ulrich Brose, Mark Maraun, Stefan Scheu
Software Mentions: 6
Published: over 3 years ago
10.3390/nu10091230
Expression of Granulisyn, Perforin and Granzymes in Human Milk over Lactation and in the Case of Maternal InfectionCited by: 15
Author(s): Alecia-Jane Twigger, Gwendoline K. Küffer, Donna T. Geddes, Luis Filgueria
Software Mentions: 6
Published: about 6 years ago
10.1186/1471-2407-10-351
Characterization of the apoptotic response of human leukemia cells to organosulfur compoundsCited by: 7
Author(s): Wendy Wei-Lynn Wong, Paul C. Boutros, Amanda R. Wasylishen, Kristal D. Guckert, Erin M. O’Brien, Rebecca E. Griffiths, Anna Martirosyan, Christina Bros, Igor Jurišica, Richard Francis Langler, Linda Z. Penn
Software Mentions: 5
Published: over 14 years ago
10.1038/srep29971
The impact of preconceptional obesity on trajectories of maternal lipids during gestationCited by: 26
Author(s): Latife Bozkurt, Christian Göbl, Anna-Theresa Hörmayer, Anton Luger, Giovanni Pacini, Alexandra Kautzky‐Willer
Software Mentions: 5
Published: over 8 years ago
10.3390/ijms17060956
Human Milk Cells Contain Numerous miRNAs that May Change with Milk Removal and Regulate Multiple Physiological ProcessesCited by: 58
Author(s): Mohammed Alsaweed, Ching Tat Lai, Peter Hartmann, Donna T. Geddes, Foteini Kakulas
Software Mentions: 5
Published: over 8 years ago
10.18632/oncotarget.13252
Prognostic and predictive values of CDK1 and MAD2L1 in lung adenocarcinomaCited by: 81
Author(s): Yuan-Xiang Shi, Tao Zhu, Ting Zou, Wei Zhuo, Yixin Chen, Ma-Sha Huang, Wei Zheng, Chenjing Wang, Xi Li, Xiao‐Yuan Mao, Wei Zhang, Hong‐Hao Zhou, Ji‐Ye Yin, Zhao‐Qian Liu
Software Mentions: 5
Published: about 8 years ago
10.3389/fmicb.2021.653880
Interactions Between Tsetse Endosymbionts and Glossina pallidipes Salivary Gland Hypertrophy Virus in Glossina HostsCited by: 4
Author(s): Güler Demirbaş-Uzel, Antonios A. Augustinos, Vangelis Doudoumis, Andrew G. Parker, George Tsiamis, Kostas Bourtzis, Adly M. M. Abd-Alla
Software Mentions: 5
Published: over 3 years ago
10.1371/journal.pone.0017388
Azacytidine and Decitabine Induce Gene-Specific and Non-Random DNA Demethylation in Human Cancer Cell LinesCited by: 129
Author(s): Sabine Hagemann, Oliver Heil, Frank Lyko, Bodo Brueckner
Software Mentions: 5
Published: over 13 years ago
10.1186/s12862-016-0841-7
Plasticity in growth of farmed and wild Atlantic salmon: is the increased growth rate of farmed salmon caused by evolutionary adaptations to the commercial diet?Cited by: 25
Author(s): Alison C. Harvey, Monica Favnebøe Solberg, Eva Troianou, Gary R. Carvalho, Martin I. Taylor, Simon Creer, Lise Dyrhovden, Ivar Helge Matre, Kevin A. Glover
Software Mentions: 5
Published: almost 8 years ago
10.1371/journal.pone.0167375
Mangrove Crab Ucides cordatus Removal Does Not Affect Sediment Parameters and Stipule Production in a One Year Experiment in Northern BrazilCited by: 12
Author(s): Nathalie Pülmanns, Ulf Mehlig, Inga Nordhaus, Ulrich Saint-Paul, Karen Diele
Software Mentions: 5
Published: almost 8 years ago
10.1371/journal.pcbi.0030116
Machine Learning and Its Applications to BiologyCited by: 482
Author(s): Adi L. Tarca, Vincent J. Carey, Xuewen Chen, Roberto Romero, Sorin Drăghici
Software Mentions: 5
Published: over 17 years ago
10.3390/nu7125535
A Survey of Plant Iron Content—A Semi-Systematic ReviewCited by: 21
Author(s): Robert Ancuceanu, Mihaela Dinu, Marilena Viorica Hovaneț, Adriana Iuliana Anghel, Carmen Violeta Popescu, Simona Negreș
Software Mentions: 5
Published: almost 9 years ago
10.1186/1471-2164-11-263
Aryl hydrocarbon receptor (AHR)-regulated transcriptomic changes in rats sensitive or resistant to major dioxin toxicitiesCited by: 47
Author(s): Ivy D. Moffat, Paul C. Boutros, Hanbo Chen, Allan B. Okey, Raimo Pohjanvirta
Software Mentions: 5
Published: over 14 years ago
10.3390/s120608145
Accuracy and Precision of Equine Gait Event Detection during Walking with Limb and Trunk Mounted Inertial SensorsCited by: 49
Author(s): E. G. J. Olsen, Pia Haubro Andersen, Thilo Pfau
Software Mentions: 5
Published: over 12 years ago
10.1038/s41598-020-58661-9
Domestication leads to increased predation susceptibilityCited by: 30
Author(s): Monica Favnebøe Solberg, Grethe Robertsen, Line Elisabeth Breivik Sundt-Hansen, Kjetil Hindar, Kevin A. Glover
Software Mentions: 5
Published: almost 5 years ago
10.3389/fpls.2016.01225
TALE-Like Effectors Are an Ancestral Feature of the Ralstonia solanacearum Species Complex and Converge in DNA Targeting SpecificityCited by: 29
Author(s): Niklas Schandry, Orlando de Lange, Philippe Prior, Thomas Lahaye
Software Mentions: 5
Published: over 8 years ago
10.1371/journal.pone.0229800
Pre-/analytical factors affecting whole blood and plasma glucose concentrations in loggerhead sea turtles (Caretta caretta)Cited by: 7
Author(s): P Kunze, Justin R. Perrault, Yu‐Mei Chang, Charles A. Manire, Samantha Clark, Nicole I. Stacy
Software Mentions: 5
Published: over 4 years ago
10.1007/s00227-017-3279-6
Life-history responses to changing temperature and salinity of the Baltic Sea copepod Eurytemora affinisCited by: 22
Author(s): Konrad Karlsson, Simona Puiac, Monika Winder
Software Mentions: 5
Published: almost 7 years ago
10.1371/journal.pone.0214878
Statistical models discriminating between complex samples measured with microfluidic receptor-cell arraysCited by: 2
Author(s): Ron Wehrens, Margriet Roelse, Maurice Henquet, Marco van Lenthe, P.W. Goedhart, M.A. Jongsma
Software Mentions: 5
Published: over 5 years ago
10.1186/s12859-018-2430-9
A comparative study of survival models for breast cancer prognostication revisited: the benefits of multi-gene modelsCited by: 5
Author(s): Michal R. Grzadkowski, Dorota H. Sendorek, Christine P’ng, Vincent Huang, Paul C. Boutros
Software Mentions: 4
Published: about 6 years ago
10.3389/fmicb.2018.02037
Expression Profile of Glossina pallidipes MicroRNAs During Symptomatic and Asymptomatic Infection With Glossina pallidipes Salivary Gland Hypertrophy Virus (Hytrosavirus)Cited by: 8
Author(s): Irene K. Meki, İkbal Agah Ince, Henry M. Kariithi, Drion G. Boucias, Orhan Özcan, Andrew G. Parker, Just M. Vlak, Monique M. van Oers, Adly M. M. Abd-Alla
Software Mentions: 4
Published: about 6 years ago
10.1371/journal.pone.0184590
Mapping the STK4/Hippo signaling network in prostate cancer cellCited by: 22
Author(s): Damien Ready, Kader Yagiz, Pooneh Amin, Yüksel Yıldız, Vincent Funari, Seardar Bozdag, Bekir Cinar
Software Mentions: 4
Published: about 7 years ago
10.1371/journal.pone.0174067
Enhancing sampling design in mist-net bat surveys by accounting for sample size optimizationCited by: 14
Author(s): Leonardo Carreira Trevelin, Roberto Leonan Morim Novaes, Paul François Colas-Rosas, Thayse Cristhina Melo Benathar, Carlos A. Peres
Software Mentions: 4
Published: over 7 years ago
10.7554/eLife.37927
Six domesticated PiggyBac transposases together carry out programmed DNA elimination in ParameciumCited by: 36
Author(s): Julien Bischerour, Simran Bhullar, Cyril Denby Wilkes, Vinciane Régnier, Nathalie Mathy, Emeline Dubois, Aditi Singh, Estienne C. Swart, Olivier Arnaiz, Linda Sperling, Mariusz Nowacki, Mireille Bétermier
Software Mentions: 4
Published: about 6 years ago
10.1371/journal.pone.0085867
The Effect of UV-C Pasteurization on Bacteriostatic Properties and Immunological Proteins of Donor Human MilkCited by: 76
Author(s): Lukas Christen, Ching Tat Lai, Ben Hartmann, Peter Hartmann, Donna T. Geddes
Software Mentions: 4
Published: almost 11 years ago
10.1186/s13059-018-1539-5
Combining accurate tumor genome simulation with crowdsourcing to benchmark somatic structural variant detectionCited by: 41
Author(s): Anna Y. Lee, Adam D. Ewing, Kyle Ellrott, Yin Hu, Kathleen E. Houlahan, J. Christopher Bare, Shadrielle M. G. Espiritu, Vincent Huang, Kristen K. Dang, Zechen Chong, Cristian Caloian, Takafumi N. Yamaguchi, Michael R. Kellen, Ken Chen, Thea Norman, Stephen H. Friend, Justin Guinney, Gustavo Stolovitzky, David Haussler, Adam A. Margolin, Joshua M. Stuart, Paul C. Boutros
Software Mentions: 4
Published: about 6 years ago
10.1371/journal.pmed.1002543
Comparative analysis of the association between 35 frailty scores and cardiovascular events, cancer, and total mortality in an elderly general population in England: An observational studyCited by: 57
Author(s): Gloria Aguayo, Michel Vaillant, Anne Françoise Donneau, Anna Schritz, Saverio Stranges, Laurent Malisoux, Anna Chioti, Michèle Guillaume, Majon Muller, Daniel R. Witte
Software Mentions: 4
Published: over 6 years ago
10.1002/hep.26414
Proteome‐wide analyses of human hepatocytes during differentiation and dedifferentiationCited by: 108
Author(s): Cliff Rowe, Dave T. Gerrard, Roz Jenkins, Andrew Berry, Kesta Durkin, Lars Sundström, Chris Goldring, B. Kevin Park, Neil R. Kitteringham, Karen Piper Hanley, Neil A. Hanley
Software Mentions: 4
Published: over 11 years ago
10.1083/jcb.201804042
Mammary molecular portraits reveal lineage-specific features and progenitor cell vulnerabilitiesCited by: 33
Author(s): Alison E. Casey, Ankit Sinha, Rajat Singhania, Julie Livingstone, Paul Waterhouse, Pirashaanthy Tharmapalan, Jennifer Cruickshank, Mona Shehata, Erik Drysdale, Hui Fang, Hye-Yeon Kim, Ruth Isserlin, Swneke D. Bailey, Tiago da Silva Medina, Geneviève Deblois, Yu-Jia Shiah, Dalia Baršytė-Lovejoy, Stefan Höfer, Gary D. Bader, Mathieu Lupien, C.H. Arrowsmith, S. Knapp, Daniel D De Carvalho, Hal K. Berman, Paul C. Boutros, Thomas Kislinger, Rama Khokha
Software Mentions: 4
Published: over 6 years ago
10.1007/s10928-020-09730-z
Population pharmacokinetic modeling of intramuscular and oral dexamethasone and betamethasone in Indian womenCited by: 8
Author(s): Wojciech Krzyzanski, Mark A. Milad, Alan H. Jobe, Thomas Peppard, Robert R. Bies, William J. Jusko
Software Mentions: 4
Published: almost 4 years ago
10.1098/rsos.170633
Starvation effects on nitrogen and carbon stable isotopes of animals: an insight from meta-analysis of fasting experimentsCited by: 64
Author(s): Hideyuki Doi, Fumikazu Akamatsu, Angélica L. González
Software Mentions: 4
Published: over 7 years ago
10.1098/rsos.171551
Correction to ‘Starvation effects on nitrogen and carbon stable isotopes of animals: an insight from meta-analysis of fasting experiments’Cited by: 3
Author(s): Hideyuki Doi, Fumikazu Akamatsu, Andrea F. Gonzalez
Software Mentions: 4
Published: about 7 years ago
10.14202/vetworld.2020.1245-1250
Effect of soybean expeller supplementation during the final phase of sow gestation on litter birth weightCited by: 0
Author(s): Santiago Masi Mignaco, Ana Alba-Casals, Alicia Carranza, Julián Parada
Software Mentions: 4
Published: almost 5 years ago
10.1038/srep11671
Genome-scale long noncoding RNA expression pattern in squamous cell lung cancerCited by: 27
Author(s): Ji‐Ye Yin, Chenyue Qian, Xiangping Li, Yu Zhang, Huijuan He, Jingjing Wang, Juan Chen, Jiajia Cui, Rongrong Liu, Hui Zhou, Xiao Lin, Xiaojing Xu, Yi Zheng, Yilan Fu, Zi-Yu Chen, Xiang Chen, Wei Zhang, Cheng-Cheng Ye, Hong‐Hao Zhou, Zhao‐Qian Liu
Software Mentions: 4
Published: over 9 years ago
10.1186/s12936-021-03726-x
The assembly effect: the connectedness between populations is a double‐edged sword for public health interventionsCited by: 2
Author(s): Sai Thein Than Tun, Daniel M. Parker, Ricardo Águas, Lisa J. White
Software Mentions: 4
Published: over 3 years ago
10.1007/s10548-020-00772-7
Accounting for Heterogeneity: Mixed-Effects Models in Resting-State EEG Data in a Sample of Tinnitus SufferersCited by: 11
Author(s): Constanze Riha, Dominik Güntensperger, Tobias Kleinjung, Martin Meyer
Software Mentions: 4
Published: over 4 years ago
10.1186/1472-6807-7-15
Scoring predictive models using a reduced representation of proteins: model and energy definitionCited by: 26
Author(s): Federico Fogolari, L. Pieri, Agostino Dovier, Luca Bortolussi, G. Giugliarelli, Alessandra Corazza, Gennaro Esposito, Paolo Viglino
Software Mentions: 4
Published: almost 18 years ago
10.1186/1756-0500-5-85
Mathematical modeling and comparison of protein size distribution in different plant, animal, fungal and microbial species reveals a negative correlation between protein size and protein number, thus providing insight into the evolution of proteomesCited by: 84
Author(s): Axel Tiessen, Paulino Pérez‐Rodríguez, Luis Delaye
Software Mentions: 4
Published: almost 13 years ago
10.1186/s12866-018-1298-1
RNA interference-based antiviral immune response against the salivary gland hypertrophy virus in Glossina pallidipesCited by: 9
Author(s): Irene K. Meki, Henry M. Kariithi, Andrew G. Parker, Marc J. B. Vreysen, V.I.D. Ros, Just M. Vlak, Monique M. van Oers, Adly M. M. Abd-Alla
Software Mentions: 4
Published: about 6 years ago
10.1186/s12866-018-1276-7
Impact of Glossina pallidipes salivary gland hypertrophy virus (GpSGHV) on a heterologous tsetse fly host, Glossina fuscipes fuscipesCited by: 4
Author(s): Güler Demirbaş-Uzel, Andrew G. Parker, Marc J. B. Vreysen, Robert L. Mach, Jérémy Bouyer, Peter Takáč, Adly M. M. Abd-Alla
Software Mentions: 4
Published: about 6 years ago
10.1186/s12866-018-1283-8
Combining paratransgenesis with SIT: impact of ionizing radiation on the DNA copy number of Sodalis glossinidius in tsetse fliesCited by: 20
Author(s): Güler Demirbaş-Uzel, Linda De Vooght, Andrew G. Parker, Marc J. B. Vreysen, Robert L. Mach, Jan Van Den Abbeele, Adly M. M. Abd-Alla
Software Mentions: 4
Published: about 6 years ago
10.3390/s100302150
Data Driven Performance Evaluation of Wireless Sensor NetworksCited by: 12
Author(s): Alejandro C. Frery, Heitor S. Ramos, José Alencar-Neto, Eduardo F. Nakamura, Antônio A. F. Loureiro
Software Mentions: 4
Published: over 14 years ago
10.1186/1472-6947-11-31
PKreport: report generation for checking population pharmacokinetic model assumptionsCited by: 6
Author(s): Xiaoyong Sun, Jun Li
Software Mentions: 4
Published: over 13 years ago
10.1186/s12862-016-0607-2
Thermal plasticity in farmed, wild and hybrid Atlantic salmon during early development: has domestication caused divergence in low temperature tolerance?Cited by: 16
Author(s): Monica Favnebøe Solberg, Lise Dyrhovden, Ivar Helge Matre, Kevin A. Glover
Software Mentions: 4
Published: almost 9 years ago
10.3390/nu9030252
Associations between Maternal Body Composition and Appetite Hormones and Macronutrients in Human MilkCited by: 66
Author(s): Sambavi Kugananthan, Zoya Gridneva, Ching Tat Lai, Anna R. Hepworth, Peter J. Mark, Foteini Kakulas, Donna T. Geddes
Software Mentions: 4
Published: over 7 years ago
10.1186/1471-2105-12-208
NCACO-score: An effective main-chain dependent scoring function for structure modelingCited by: 4
Author(s): Liqing Tian, Aiping Wu, Yang Cao, Xiaoxi Dong, Yun Hu, Taijiao Jiang
Software Mentions: 4
Published: over 13 years ago
10.1155/2012/130769
Oxygen Saturation and Suck-Swallow-Breathe Coordination of Term Infants during Breastfeeding and Feeding from a Teat Releasing Milk Only with VacuumCited by: 22
Author(s): Vanessa S. Sakalidis, Holly L. McClellan, Anna R. Hepworth, Jacqueline C. Kent, Ching Tat Lai, Peter Hartmann, Donna T. Geddes
Software Mentions: 4
Published: almost 13 years ago
10.3390/ijerph121012340
The Effects of Leptin on Breastfeeding BehaviourCited by: 27
Author(s): Anna Cannon, Foteini Kakulas, Anna R. Hepworth, Ching Tat Lai, Peter Hartmann, Donna T. Geddes
Software Mentions: 4
Published: about 9 years ago
10.1371/journal.pone.0101499
Functional Changes in Littoral Macroinvertebrate Communities in Response to Watershed-Level Anthropogenic StressCited by: 19
Author(s): Katya E. Kovalenko, Valerie Brady, Jan J. H. Ciborowski, S. Ilyushkin, Lucinda B. Johnson
Software Mentions: 4
Published: over 10 years ago
10.1371/journal.pone.0152610
Human Milk Cells and Lipids Conserve Numerous Known and Novel miRNAs, Some of Which Are Differentially Expressed during LactationCited by: 59
Author(s): Mohammed Alsaweed, Ching Tat Lai, Peter Hartmann, Donna T. Geddes, Foteini Kakulas
Software Mentions: 4
Published: over 8 years ago
10.1371/journal.pone.0169058
The Effect of Parasite Infection on Stable Isotope Turnover Rates of δ15N, δ13C and δ34S in Multiple Tissues of Eurasian Perch Perca fluviatilisCited by: 11
Author(s): Elizabeth Yohannes, Claudia Grimm, Karl‐Otto Rothhaupt, Jasminca Behrmann‐Godel
Software Mentions: 4
Published: almost 8 years ago