Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: irr

https://packages.ecosyste.ms/registries/pypi.org/packages/irr

numpy.irr but works
2 versions
Latest release: about 3 years ago
14 downloads last month

Papers Mentioning irr 228

10.3389/fonc.2021.646267
Exploring MRI Characteristics of Brain Diffuse Midline Gliomas With the H3 K27M Mutation Using Radiomics
Cited by: 13
Author(s): Qian Li, Fei Dong, Biao Jiang, Minming Zhang
Software Mentions: 18
Published: over 3 years ago
10.1080/17453674.2020.1846956
Uncemented or cemented stems in first-time revision total hip replacement? An observational study of 867 patients including assessment of femoral bone defect size
Cited by: 7
Author(s): Yosef Tyson, Christer Hillman, Norbert Majenburg, Olof Sköldenberg, Ola Rolfson, Johan Kärrholm, Maziar Mohaddes, Nils P Hailer
Software Mentions: 16
Published: about 4 years ago
10.1038/s41598-019-46510-3
Differential prognostic impact of platelet-derived growth factor receptor expression in NSCLC
Cited by: 19
Author(s): Thomas K. Kilvaer, Mehrdad Rakaee, Turid Hellevik, Jørg Vik, Luigi De Petris, Tom Dønnem, Carina Strell, Arne Östman, Lill-Tove Busund, Iñigo Martínez-Zubiaurre
Software Mentions: 15
Published: over 5 years ago
10.1038/s41598-020-60329-3
Neuroestrogen synthesis modifies neural representations of learned song without altering vocal imitation in developing songbirds
Cited by: 11
Author(s): Daniel M. Vahaba, Amelia Hecsh, Luke Remage‐Healey
Software Mentions: 11
Published: over 4 years ago
10.1038/s42003-020-01166-y
Spatial patterns of microbial communities across surface waters of the Great Barrier Reef
Cited by: 28
Author(s): Pedro R. Frade, Bettina Glasl, Samuel A. Matthews, Camille Mellin, Ester Á. Serrão, Kennedy Wolfe, Peter J. Mumby, Nicole S. Webster, David G. Bourne
Software Mentions: 11
Published: over 4 years ago
10.3389/fneur.2020.01021
Medical Informatics Platform (MIP): A Pilot Study Across Clinical Italian Cohorts
Cited by: 10
Author(s): Alberto Redolfi, Silvia De Francesco, Fulvia Palesi, Samantha Galluzzi, Cristina Muscio, Gloria Castellazzi, Pietro Tiraboschi, Giovanni Savini, Anna Nigri, Gabriella Bottini, Maria Grazia Bruzzone, Matteo Cotta Ramusino, Stefania Ferraro, C Wheeler-Kingshott, Fabrizio Tagliavini, Giovanni B. Frisoni, Philippe Ryvlin, Jean-François Demonet, Ferath Kherif, Stefano F. Cappa, Egidio D’Angelo
Software Mentions: 9
Published: about 4 years ago
10.1371/journal.pone.0134965
Cancer Associated Fibroblasts in Stage I-IIIA NSCLC: Prognostic Impact and Their Correlations with Tumor Molecular Markers
Cited by: 60
Author(s): Thomas K. Kilvaer, Mehrdad Rakaee, Turid Hellevik, Samer Al-Saad, Erna-Elise Paulsen, Roy M. Bremnes, Lill-Tove Busund, Tom Dønnem, Iñigo Martínez
Software Mentions: 9
Published: over 9 years ago
10.1371/journal.pmed.1002686
Deep learning for chest radiograph diagnosis: A retrospective comparison of the CheXNeXt algorithm to practicing radiologists
Cited by: 755
Author(s): Pranav Rajpurkar, Jeremy Irvin, Robyn L. Ball, Kaylie Zhu, Brandon Yang, Hershel Mehta, Tony Duan, Daisy Yi Ding, Aarti Bagul, Curtis P. Langlotz, Bhavik N. Patel, Kristen W. Yeom, Katie Shpanskaya, Francis G. Blankenberg, Jayne Seekins, Timothy J. Amrhein, David A. Mong, Safwan Halabi, Evan J. Zucker, Andrew Y. Ng, Matthew P. Lungren
Software Mentions: 9
Published: about 6 years ago
10.18632/oncotarget.12360
Prognostic effect of intratumoral neutrophils across histological subtypes of non-small cell lung cancer
Cited by: 45
Author(s): Mehrdad Rakaee, Lill-Tove Busund, Erna-Elise Paulsen, Elin Richardsen, Samer Al-Saad, Sigve Andersen, Tom Dønnem, Roy M. Bremnes, Thomas K. Kilvaer
Software Mentions: 9
Published: about 8 years ago
10.3390/v13060962
Evaluation of Dried Blood Spot Testing for SARS-CoV-2 Serology Using a Quantitative Commercial Assay
Cited by: 15
Author(s): Davor Brinc, Mia J Biondi, Daniel Li, Hao Sun, Camelia Capraru, David Smookler, Muhammad Atif Zahoor, Joseph R. Casey, Vathany Kulasingam, Jordan J. Feld
Software Mentions: 9
Published: over 3 years ago
10.3390/pathogens10091221
Prevalence of Vector-Borne Pathogens in Reproductive and Non-Reproductive Tissue Samples from Free-Roaming Domestic Cats in the South Atlantic USA
Cited by: 5
Author(s): Charlotte Manvell, Kelli Ferris, Ricardo G. Maggi, Edward B. Breitschwerdt, Erin Lashnits
Software Mentions: 9
Published: about 3 years ago
10.1371/journal.pone.0180435
White-nose syndrome pathology grading in Nearctic and Palearctic bats
Cited by: 38
Author(s): Jiří Pikula, Sybill K. Amelon, Hana Banďouchová, Tomáš Bartonička, Hana Berková, Jiří Brichta, Sarah E. Hooper, Tomasz Kokurewicz, Miroslav Kolařík, Bernd Köllner, Veronika Kováčová, Petr Linhart, Vladimír Piaček, Gregory G. Turner, Jan Zukal, Natália Martínková
Software Mentions: 8
Published: over 7 years ago
10.1371/journal.pone.0242142
'Tiny numbers' are actually tiny: Evidence from gestures in the TV News Archive
Cited by: 13
Author(s): Greg Woodin, Bodo Winter, Marcus Perlman, Jeannette Littlemore, Teenie Matlock
Software Mentions: 8
Published: about 4 years ago
10.1038/s41598-021-83888-5
A novel approach for microRNA in situ hybridization using locked nucleic acid probes
Cited by: 6
Author(s): Isabella Worlewenut Paulsen, Micheal Bzorek, John Elmerdahl Olsen, Birgitte Grum-Schwensen, Jesper T. Troelsen, Ole Birger Pedersen
Software Mentions: 8
Published: over 3 years ago
10.3389/fpsyg.2020.567484
Mental Health Through the COVID-19 Quarantine: A Growth Curve Analysis on Italian Young Adults
Cited by: 85
Author(s): Anna Parola, Alessandro Rossi, Francesca Tessitore, Gina Troisi, Stefania Mannarini
Software Mentions: 8
Published: about 4 years ago
10.3389/fpsyg.2020.00810
Validation of the Toronto Empathy Questionnaire (TEQ) Among Medical Students in China: Analyses Using Three Psychometric Methods
Cited by: 10
Author(s): Richard Huan Xu, Eliza Lai Yi Wong, Sabrina Yu jun Lu, Ling-Ming Zhou, Jing Chang, Dong Wang
Software Mentions: 8
Published: over 4 years ago
10.3390/cancers13184656
The Evolution and Prognostic Role of Tumour-Infiltrating Lymphocytes and Peripheral Blood-Based Biomarkers in Inflammatory Breast Cancer Patients Treated with Neoadjuvant Chemotherapy
Cited by: 7
Author(s): Christophe Van Berckelaer, Iris Vermeiren, Leonie Vercauteren, Charlotte Rypens, Gizem Öner, Xuan Bich Trinh, Wiebren A.A. Tjalma, Glenn Broeckx, Emmanuelle Charafe‐Jauffret, Steven Van Laere, François Bertucci, Cécile Colpaert, Peter van Dam
Software Mentions: 8
Published: about 3 years ago
10.1002/ece3.6167
Does breeding season variation affect evolution of a sexual signaling trait in a tropical lizard clade?
Cited by: 4
Author(s): Levi N. Gray, Anthony J. Barley, David M. Hillis, Carlos J. Pavón‐Vázquez, Steven Poe, Brittney A White
Software Mentions: 7
Published: over 4 years ago
10.1038/s41598-021-93922-1
Life experience rather than domestication accounts for dogs’ increased oxytocin release during social contact with humans
Cited by: 19
Author(s): Gwendolyn Wirobski, Friederike Range, Franka Simea Schaebs, Rüpert Palme, Tobias Deschner, Sarah Marshall-Pescini
Software Mentions: 7
Published: over 3 years ago
10.1186/s12906-018-2136-6
Is fasting safe? A chart review of adverse events during medically supervised, water-only fasting
Cited by: 40
Author(s): John S. Finnell, Bradley Saul, Alan Goldhamer, Toshia R. Myers
Software Mentions: 7
Published: almost 7 years ago
10.1038/s41598-019-48214-0
Year-round individual specialization in the feeding ecology of a long-lived seabird
Cited by: 10
Author(s): Laura Zango, José Manuel Reyes‐González, Teresa Militão, Zuzana Zajková, Eduardo Álvarez-Alonso, Raül Ramos, Jacob González‐Solís
Software Mentions: 7
Published: over 5 years ago
10.1186/s12983-019-0309-x
Mining morphometrics and age from past survey photographs
Cited by: 3
Author(s): Caitlin Black, Hannah S. Mumby, Michelle Henley
Software Mentions: 7
Published: over 5 years ago
10.3390/s20133612
Assessing the Activity of Individual Group-Housed Broilers Throughout Life Using a Passive Radio Frequency Identification System—A Validation Study
Cited by: 20
Author(s): M. van der Sluis, Y. de Haas, B. de Klerk, T.B. Rodenburg, E.D. Ellen
Software Mentions: 7
Published: over 4 years ago
10.3389/fpsyg.2019.00413
A Shared Food Source Is Not Necessary to Elicit Inequity Aversion in Dogs
Cited by: 5
Author(s): Jim McGetrick, Sabrina Ausserwöger, Ingrid Leidinger, Claudia Attar, Friederike Range
Software Mentions: 7
Published: over 5 years ago
10.1371/journal.pmed.1002699
Deep-learning-assisted diagnosis for knee magnetic resonance imaging: Development and retrospective validation of MRNet
Cited by: 385
Author(s): Nicholas Bien, Pranav Rajpurkar, Robyn L. Ball, Jeremy Irvin, Allison Park, Erik Jones, Michael Bereket, Bhavik N. Patel, Kristen W. Yeom, Katie Shpanskaya, Safwan Halabi, Evan J. Zucker, Gary S. Fanton, Derek F. Amanatullah, Christopher F. Beaulieu, Geoffrey M. Riley, Russell J. Stewart, Francis G. Blankenberg, David B. Larson, Ricky Jones, Curtis P. Langlotz, Andrew Y. Ng, Matthew P. Lungren
Software Mentions: 7
Published: almost 6 years ago
10.3390/nu13072471
Use of Different Food Classification Systems to Assess the Association between Ultra-Processed Food Consumption and Cardiometabolic Health in an Elderly Population with Metabolic Syndrome (PREDIMED-Plus Cohort)
Cited by: 38
Author(s): Celia Martinez-Perez, Rodrigo San-Cristóbal, Pilar Guallar-Castillón, Miguel Ángel Martínez‐González, Jordi Salas‐Salvadó, Dolores Corella, Olga Castañer, José Alfredo Martínez Hernández, Ángel M. Alonso‐Gómez, Julia Wärnberǵ, Jesús Vioque, Dora Romaguera, José López‐Miranda, Ramón Estruch, Francisco J. Tinahones, José Lapetra, Lluís Serra-Majem, Aurora Bueno‐Cavanillas, Josep A. Tur, Vicente Martín, Xavier Pintó Sala, José J. Gaforio, Pilar Matía, Josep Vidal, Clotilde Vázquez, Emilio Ros, Maira Bes–Rastrollo, Nancy Babió, José V. Sorlí, Camille Lassale, Beatriz Pérez-Sanz, Jessica Vaquero-Luna, María Julia Ajejas Bazán, María Concepción Barceló-Iglesias, Jadwiga Konieczna, Antonio García Ríos, María Rosa Bernal-López, José Manuel Santos‐Lozano, Estefanía Toledo, Nerea Becerra‐Tomás, Olga Portolés, María Dolores Zomeño, Itziar Abete, Anai Moreno-Rodríguez, Oscar Lecea-Juarez, Stephanie K. Nishi, Júlia Muñoz-Martínez, José M. Ordovás, Lidia Daimiel
Software Mentions: 7
Published: over 3 years ago
10.1007/s10071-020-01461-5
Early life differences in behavioral predispositions in two Alligatoridae species
Cited by: 3
Author(s): Stephan A. Reber, Jinook Oh, Judith Janisch, Colin Stevenson, Shaun Foggett, Anna Wilkinson
Software Mentions: 7
Published: almost 4 years ago
10.7717/peerj.5489
The ability of magnetic field sensors to monitor feeding in three domestic herbivores
Cited by: 3
Author(s): Christina Mulvenna, Rory P. Wilson, Nikki J. Marks, Aaron G. Maule, David Scantlebury
Software Mentions: 7
Published: about 6 years ago
10.1186/1471-2180-14-171
Colony-live — a high-throughput method for measuring microbial colony growth kinetics— reveals diverse growth effects of gene knockouts in Escherichia coli
Cited by: 38
Author(s): Rikiya Takeuchi, Takeyuki Tamura, Toru Nakayashiki, Yuzo Tanaka, Ai Muto, Barry L. Wanner, Hirotada Mori
Software Mentions: 7
Published: over 10 years ago
10.1371/journal.pone.0257726
Specificity of spiders among fear- and disgust-eliciting arthropods: Spiders are special, but phobics not so much
Cited by: 11
Author(s): Eva Landová, Markéta Janovcová, Iveta Štolhoferová, Silvie Rádlová, Petra Frýdlová, Kristýna Sedláčková, Daniel Frynta
Software Mentions: 6
Published: about 3 years ago
10.1371/journal.pone.0193929
Association of gadolinium-enhanced magnetic resonance imaging with hepatic fibrosis and inflammation in primary sclerosing cholangitis
Cited by: 7
Author(s): Sarah Keller, Annette Aigner, Roman Zenouzi, Anne C. Kim, Arnoud C. Meijer, Sören Weidemann, Till Krech, Ansgar W. Lohse, Gerhard Adam, Christoph Schramm, Jin Yamamura
Software Mentions: 6
Published: over 6 years ago
10.1111/hex.13227
Shortening and validation of the Patient Engagement In Research Scale (PEIRS) for measuring meaningful patient and family caregiver engagement
Cited by: 16
Author(s): Clayon B. Hamilton, Alison M. Hoens, Annette McKinnon, Shanon McQuitty, Kelly English, Lisa D. Hawke, Linda Li
Software Mentions: 6
Published: over 3 years ago
10.3389/fpsyg.2018.00830
Short Forms of Wechsler Scales Assessing the Intellectually Gifted Children Using Simulation Data
Cited by: 17
Author(s): Alexandre Aubry, Béatrice Bourdin
Software Mentions: 6
Published: over 6 years ago
10.3390/ani10010113
Exploring the Use of a Qualitative Behavioural Assessment Approach to Assess Emotional State of Calves in Rodeos
Cited by: 6
Author(s): Sally Rizzuto, Di Evans, Bethany Wilson, Paul D. McGreevy
Software Mentions: 6
Published: almost 5 years ago
10.1017/S0033291719002253
Cognitive paths from trauma to posttraumatic stress disorder: a prospective study of Ehlers and Clark's model in survivors of assaults or road traffic collisions
Cited by: 21
Author(s): Esther T. Beierl, Inga Böllinghaus, David M. Clark, E Glucksman, Anke Ehlers
Software Mentions: 6
Published: about 5 years ago
10.1126/sciadv.aba2862
Who do you trust? Wild birds use social knowledge to avoid being deceived
Cited by: 4
Author(s): Filipe Cristovão Ribeiro da Cunha, Michael Griesser
Software Mentions: 6
Published: over 3 years ago
10.1371/journal.pone.0190393
Why rate when you could compare? Using the “EloChoice” package to assess pairwise comparisons of perceived physical strength
Cited by: 28
Author(s): Andrew P. Clark, Kate L. Howard, Andy Woods, Ian S. Penton-Voak, Christof Neumann
Software Mentions: 6
Published: almost 7 years ago
10.1371/journal.pone.0179092
Inter-rater reliability of categorical versus continuous scoring of fish vitality: Does it affect the utility of the reflex action mortality predictor (RAMP) approach?
Cited by: 12
Author(s): Pieter Meeremans, Noëlle Yochum, Marc Kochzius, Bart Ampe, Frank Tuyttens, Sven Sebastian Uhlmann
Software Mentions: 6
Published: over 7 years ago
10.1186/s12903-018-0666-4
Validity of self-reported number of teeth in middle-aged Finnish adults: the Northern Finland Birth Cohort Study 1966
Cited by: 15
Author(s): Toni Similä, Pentti Nieminen, Jorma I. Virtanen
Software Mentions: 6
Published: almost 6 years ago
10.3389/fonc.2019.01485
The Potential of Radiomics Nomogram in Non-invasively Prediction of Epidermal Growth Factor Receptor Mutation Status and Subtypes in Lung Adenocarcinoma
Cited by: 31
Author(s): Wei Zhao, Ying Wu, Yanan Xu, Yingli Sun, Pan Gao, Min Tan, Wenrui Ma, Cheng Li, Liang Jin, Yanqing Hua, Jun Liu, Ming Li
Software Mentions: 6
Published: almost 5 years ago
10.1186/s13063-015-1141-z
Process evaluation of a knowledge translation intervention using facilitation of local stakeholder groups to improve neonatal survival in the Quang Ninh province, Vietnam
Cited by: 25
Author(s): Leif Eriksson, Trần Quang Huy, Dương Minh Đức, Katarina Ekholm Selling, Dinh Phuong Hoa, Nguyễn Thị Thanh Thủy, Nguyen Thu Nga, Lars‐Åke Persson, Lars Wallin
Software Mentions: 5
Published: almost 9 years ago
10.1167/tvst.8.5.4
A Method to Calibrate the Carbon Dioxide (Chemical) Stimuli of Pneumatic Esthesiometer Externally
Cited by: 1
Author(s): Varadharajan Jayakumar, Trefford Simpson
Software Mentions: 5
Published: about 5 years ago
10.1590/1414-431X20198711
Reproducibility of carotid ultrasound measurements in the Brazilian Longitudinal Study of Adult Health (ELSA-Brasil) at baseline
Cited by: 5
Author(s): Pedro José dos Santos Neto, Eduardo H. Sena-Santos, Danilo Peron Meireles, Itamar S Santos, Paulo A. Lotufo
Software Mentions: 5
Published: almost 6 years ago
10.1186/s13071-016-1843-4
Evaluation of three enzyme-linked immunosorbent assays for sarcoptic mange diagnosis and assessment in the Iberian ibex, Capra pyrenaica
Cited by: 24
Author(s): Arián Ráez‐Bravo, José E. Granados, Emmanuel Serrano, Debora Dellamaria, Rosa Casáis, Luca Rossi, Anna Puigdemont, Francisco Javier Cano-Manuel, Paulino Fandós, Jesús M. Pérez, J. Alberto Espinosa, Ramón C. Soriguer, Carlo Vittorio Citterio, Jorge Ramón López‐Olvera
Software Mentions: 5
Published: about 8 years ago
10.3390/ani11071860
Vacuum Dynamics as an Alternative Method for Detection of Bimodal Milk Ejection in Dairy Cows
Cited by: 0
Author(s): Matthias Wieland, C.M. Geary, G. Gioia, K. L. Case, P. Moroni, Anja Sipka
Software Mentions: 5
Published: over 3 years ago
10.1371/journal.pone.0213066
HIV-related posts from a Chinese internet discussion forum: An exploratory study
Cited by: 7
Author(s): Yuan Dong, Xin Zhou, Yi‐Han Lin, Qichao Pan, Ying Wang
Software Mentions: 5
Published: over 5 years ago
10.2196/13408
Translation of the eHealth Impact Questionnaire for a Population of Dutch Electronic Health Users: Validation Study
Cited by: 12
Author(s): Koen Ilja Neijenhuijs, Anja van der Hout, Evalien Veldhuijzen, Gwendolyne G M Scholten-Peeters, Cornelia F. van Uden–Kraan, Pim Cuijpers, Irma M. Verdonck‐de Leeuw
Software Mentions: 5
Published: about 5 years ago
10.1007/s00330-020-06957-9
Reliability and prognostic value of radiomic features are highly dependent on choice of feature extraction platform
Cited by: 104
Author(s): Isabella Fornacon-Wood, Hitesh Mistry, Christoph Ackermann, Fiona Blackhall, A. McPartlin, Corinne Faivre-Finn, Gareth J Price, James P.B. O’Connor
Software Mentions: 5
Published: over 4 years ago
10.1371/journal.pone.0112856
Hydrologic Landscape Regionalisation Using Deductive Classification and Random Forests
Cited by: 23
Author(s): Stuart C. Brown, Rebecca E. Lester, Vincent L. Versace, Jonathon Fawcett, L. Laurenson
Software Mentions: 5
Published: about 10 years ago
10.1177/0300985820985138
Stereology in Grading and Prognosis of Canine Cutaneous Mast Cell Tumors
Cited by: 0
Author(s): Mafalda Casanova, Sandra Branco, Inês Berenguer Veiga, André Barros, Pedro Faísca
Software Mentions: 5
Published: almost 4 years ago
10.1371/journal.pone.0255241
Detecting joint attention events in mother-infant dyads: Sharing looks cannot be reliably identified by naïve third-party observers
Cited by: 2
Author(s): Kirsty E. Graham, Joanna C. Buryn-Weitzel, Nicole J Lahiff, Claudia Wilke, Katie E. Slocombe
Software Mentions: 5
Published: over 3 years ago
10.1186/s40168-018-0543-z
Quantification of variation and the impact of biomass in targeted 16S rRNA gene sequencing studies
Cited by: 40
Author(s): Jeffrey M. Bender, Fan Li, Helty Adisetiyo, David Lee, Sara Zabih, Long Hung, Thomas A. Wilkinson, Pia S. Pannaraj, Rosemary C. She, Jennifer Dien Bard, Nicole H. Tobin, Grace M. Aldrovandi
Software Mentions: 5
Published: about 6 years ago
10.1371/journal.pone.0248224
Real-life evaluation of histologic scores for Ulcerative Colitis in remission
Cited by: 8
Author(s): Christian Børde Arkteg, Sveinung Wergeland Sørbye, Lene Riis, Stig Manfred Dalen, Jon Florholmen, Rasmus Goll
Software Mentions: 5
Published: over 3 years ago
10.1002/ece3.7150
Contrasting patterns in the occurrence and biomass centers of gravity among fish and macroinvertebrates in a continental shelf ecosystem
Cited by: 10
Author(s): Kevin D. Friedland, Szymon Smoliński, Kisei R. Tanaka
Software Mentions: 5
Published: almost 4 years ago
10.3390/jcm9041209
Clinical and Radiologic Features Together Better Predict Lung Nodule Malignancy in Patients with Soft-Tissue Sarcoma
Cited by: 1
Author(s): Cecilia Tetta, Antonio Giugliano, Laura Tonetti, Michele Rocca, Alessandra Longhi, Francesco Londero, Gianmarco Parise, Orlando Parise, Linda Renata Micali, Mark La Meir, Jos G. Maessen, Sandro Gelsomino
Software Mentions: 5
Published: over 4 years ago
10.3390/cancers12082322
Comparison of NGS and MFC Methods: Key Metrics in Multiple Myeloma MRD Assessment
Cited by: 14
Author(s): Katharina Kriegsmann, Michael Hundemer, Nicole Hofmeister-Mielke, Philipp Reichert, Calin-Petru Manta, Mohamed H.S. Awwad, Sandra Sauer, Uta Bertsch, Britta Besemer, Roland Fenk, Mathias Hänel, Markus Munder, Katja Weisel, Igor W Blau, Andreas Neubauer, Carsten Müller‐Tidow, Marc S. Raab, Hartmut Goldschmidt, Stefanie Huhn
Software Mentions: 5
Published: over 4 years ago
10.1371/journal.pone.0193400
Blood concentration of bupivacaine and duration of sensory and motor block following ultrasound-guided femoral and sciatic nerve blocks in dogs
Cited by: 18
Author(s): Michéal O Cathasaigh, Matt R. Read, Aylin Atilla, Teresa Schiller, Grace P. S. Kwong
Software Mentions: 5
Published: over 6 years ago
10.1186/s12916-021-01953-2
Deep learning-based six-type classifier for lung cancer and mimics from histopathological whole slide images: a retrospective study
Cited by: 50
Author(s): Huan Yang, Lili Chen, Zhiqiang Cheng, Mo Yang, Jianbo Wang, Cheng-Hao Lin, Yuefeng Wang, Leilei Huang, Yangshan Chen, Sui Peng, Zunfu Ke, Weizhong Li
Software Mentions: 5
Published: over 3 years ago
10.1371/journal.pone.0232085
Analyzing the popularity of YouTube videos that violate mountain gorilla tourism regulations
Cited by: 28
Author(s): Ryoma Otsuka, Gen Yamakoshi
Software Mentions: 5
Published: over 4 years ago
10.1371/journal.pone.0134817
Male Homosexual Preference: Where, When, Why?
Cited by: 9
Author(s): Julien Barthes, Pierre‐André Crochet, M. Raymond
Software Mentions: 5
Published: over 9 years ago
10.3389/fpsyg.2017.00633
Spontaneous Facial Actions Map onto Emotional Experiences in a Non-social Context: Toward a Component-Based Approach
Cited by: 8
Author(s): Shushi Namba, Russell Sarwar Kabir, Makoto Miyatani, Takashi Nakao
Software Mentions: 5
Published: over 7 years ago
10.7717/peerj.8717
Genomic analysis of variability in Delta-toxin levels between <i>Staphylococcus aureus</i> strains
Cited by: 10
Author(s): Michelle Su, James T. Lyles, Robert A. Petit, Jessica Peterson, Michelle Hargita, Huaqiao Tang, Claudia Solís-Lemus, Cassandra L. Quave, Timothy D. Read
Software Mentions: 5
Published: over 4 years ago
10.1371/journal.pone.0233731
Eyebrow position in grammatical and emotional expressions in Kazakh-Russian Sign Language: A quantitative study
Cited by: 8
Author(s): Vadim Kimmelman, Alfarabi Imashev, Medet Mukushev, Anara Sandygulova
Software Mentions: 5
Published: over 4 years ago
10.1186/s12880-021-00602-7
Differentiation of brain metastases from small and non-small lung cancers using apparent diffusion coefficient (ADC) maps
Cited by: 3
Author(s): Sebastian Johannes Müller, Eya Khadhraoui, Nicole E. Neef, Christian Riedel, Marielle Ernst
Software Mentions: 5
Published: over 3 years ago
10.1016/j.ebiom.2020.102899
Development and validation of the first consensus gene-expression signature of operational tolerance in kidney transplantation, incorporating adjustment for immunosuppressive drug therapy
Cited by: 15
Author(s): Sofia Christakoudi, Manohursingh Runglall, Paula Mobillo, Irene Rebollo‐Mesa, Tjir Li Tsui, Estefanía Nova-Lamperti, Catharine Taube, S. Norris, Yogesh Kamra, Rachel Hilton, Titus Augustine, Sunil Bhandari, Richard J. Baker, David Berglund, Sue Carr, David Game, Siân Griffin, Philip A. Kalra, Robert Lewis, Patrick B. Mark, Stephen D. Marks, Iain MacPhee, William McKane, Markus Mohaupt, Estela Paz‐Artal, Sui Phin Kon, Daniel Serón, Manish D. Sinha, Beatriz Tucker, Ondřej Viklický, Daniel Ståhl, Robert I. Lechler, Graham Lord, Maria P. Hernandez-Fuentes
Software Mentions: 5
Published: over 4 years ago
10.1186/s12889-016-3692-7
Extreme weather events in developing countries and related injuries and mental health disorders - a systematic review
Cited by: 56
Author(s): Elisabeth Rataj, Katharina Kunzweiler, Susan Garthus-Niegel
Software Mentions: 5
Published: about 8 years ago
10.3390/diagnostics11071245
Mandibular Third Molar Surgery: Intraosseous Localization of the Inferior Alveolar Nerve Using 3D Double-Echo Steady-State MRI (3D-DESS)
Cited by: 10
Author(s): Adib Al‐Haj Husain, Bernd Stadlinger, Sebastian Winklhofer, Marcel Müller, Marco Piccirelli, Silvio Valdec
Software Mentions: 5
Published: over 3 years ago
10.1186/s13613-021-00920-7
Bioreactance reliably detects preload responsiveness by the end-expiratory occlusion test when averaging and refresh times are shortened
Cited by: 3
Author(s): Francesco Gavelli, Alexandra Beurton, Jean–Louis Teboul, Nello De Vita, Danila Azzolina, Rui Shi, Arthur Pavot, Xavier Monnet
Software Mentions: 4
Published: about 3 years ago
10.7717/peerj.3302
Body composition estimation from selected slices: equations computed from a new semi-automatic thresholding method developed on whole-body CT scans
Cited by: 19
Author(s): Alizé Lacoste Jeanson, Ján Dupej, Chiara Villa, Jaroslav Brůžek
Software Mentions: 4
Published: over 7 years ago
10.5116/ijme.5740.4262
Psychometric characterization of the Obstetric Communication Assessment Tool for medical education: a pilot study
Cited by: 2
Author(s): Aldeboran N. Rodriguez, Peter DeWitt, Jennifer Fisher, Kirsten J. Broadfoot, K. Joseph Hurt
Software Mentions: 4
Published: over 8 years ago
10.7717/peerj.5842
Chronological age, biological age, and individual variation in the stress response in the European starling: a follow-up study
Cited by: 14
Author(s): Annie Gott, Clare Andrews, Maria Larriva Hormigos, Karen A. Spencer, Melissa Bateson, Daniel Nettle
Software Mentions: 4
Published: about 6 years ago
10.1038/s41598-021-90416-y
Machine learning prediction of sleep stages in dairy cows from heart rate and muscle activity measures
Cited by: 4
Author(s): Laura B. Hunter, Abdul Baten, Marie J. Haskell, Fritha M. Langford, C. E. O'Connor, James R. Webster, Kevin J. Stafford
Software Mentions: 4
Published: over 3 years ago
10.1038/s41598-021-92387-6
ACSAuto-semi-automatic assessment of human vastus lateralis and rectus femoris cross-sectional area in ultrasound images
Cited by: 7
Author(s): Paul Ritsche, Philipp Wirth, Martino V. Franchi, Oliver Faude
Software Mentions: 4
Published: over 3 years ago
10.1186/s13011-018-0147-4
Psychometric properties of the medical outcomes study: social support survey among methadone maintenance patients in Ho Chi Minh City, Vietnam: a validation study
Cited by: 21
Author(s): Quynh Long Khuong, Vu Thi Tuong, Van-Anh Ngoc Huynh, Truc Thanh Thai
Software Mentions: 4
Published: almost 7 years ago
10.2196/28020
Integrating Behavior of Children with Profound Intellectual, Multiple, or Severe Motor Disabilities With Location and Environment Data Sensors for Independent Communication and Mobility: App Development and Pilot Testing
Cited by: 3
Author(s): Von Ralph Dane Marquez Herbuela, Tomonori Karita, Yoshiya Furukawa, Yoshinori Wada, Yagi Yoshihiro, Shuichiro Senba, Eiko Onishi, Tatsuo Saeki
Software Mentions: 4
Published: over 3 years ago
10.1186/s13071-018-3248-z
Patterns of Fasciola hepatica infection in Danish dairy cattle: implications for on-farm control of the parasite based on different diagnostic methods
Cited by: 14
Author(s): Nao Takeuchi-Storm, Matthew Denwood, Heidi Huus Petersen, Heidi L. Enemark, Anna‐Sofie Stensgaard, Mita E. Sengupta, Nicola J. Beesley, Jane E. Hodgkinson, Diana Williams, Stig Milan Thamsborg
Software Mentions: 4
Published: almost 6 years ago
10.1016/j.eclinm.2021.101101
Diagnostic performance of a colorimetric RT -LAMP for the identification of SARS-CoV-2: A multicenter prospective clinical evaluation in sub-Saharan Africa
Cited by: 26
Author(s): Marycelin Baba, Molalegne Bitew, Joseph Fokam, Eric Agola Lelo, A Ahidjo, Kominist Asmamaw, Grâce Beloumou, Wallace Bulimo, Emanuele Buratti, Collins Chenwi, Hailu Dadi, Pierlanfranco D’Agaro, Laura De Conti, Nadine Fainguem, Galadima Gadzama, Paolo Maiuri, Janet Majanja, Wadegu Meshack, Alexis Ndjolo, Céline Nguefeu Nkenfou, Bamidele Soji Oderinde, Silvanos Opanda, Ludovica Segat, Cristiana Stuani, Samwel L. Symekher, Désiré Takou, Kassahun Tesfaye, Gianluca Triolo, Keyru Tuki, Serena Zacchigna, Alessandro Marcello
Software Mentions: 4
Published: about 3 years ago
10.3390/ani11072095
Heart Rate and Heart Rate Variability Change with Sleep Stage in Dairy Cows
Cited by: 2
Author(s): Laura B. Hunter, Marie J. Haskell, Fritha M. Langford, C. E. O'Connor, James R. Webster, Kevin J. Stafford
Software Mentions: 4
Published: over 3 years ago
10.1371/journal.pone.0194768
Data sharing in PLOS ONE: An analysis of Data Availability Statements
Cited by: 110
Author(s): Lisa Federer, Chris Belter, Douglas Joubert, Alicia A. Livinski, Ya-Ling Lu, Lissa N. Snyders, Holly Thompson
Software Mentions: 4
Published: over 6 years ago
10.12688/f1000research.9742.2
whoishRisk – an R package to calculate WHO/ISH cardiovascular risk scores for all epidemiological subregions of the world
Cited by: 14
Author(s): Dylan Collins, Joseph Lee, Niklas Bobrovitz, Constantinos Koshiaris, Alison Ward, Carl Heneghan
Software Mentions: 4
Published: over 7 years ago
10.1371/journal.pone.0178217
Automated prediction of emphysema visual score using homology-based quantification of low-attenuation lung region
Cited by: 8
Author(s): Motohiro Nishio, Kazuaki Nakane, Takeshi Kubo, Masahiro Yakami, Yutaka Emoto, Masaki Nishio, Kaori Togashi
Software Mentions: 4
Published: over 7 years ago
10.1007/s00428-021-03070-0
Histological interpretation of differentiated vulvar intraepithelial neoplasia (dVIN) remains challenging—observations from a bi-national ring-study
Cited by: 11
Author(s): Shatavisha Dasgupta, Elf de Jonge, Mieke Van Bockstal, Luthy S M Wong-Alcala, Suzanne Wilhelmus, Lex A C F Makkus, Katrien Schelfout, Koen K. Van de Vijver, Sander H. J. Smits, Étienne Marbaix, Senada Koljenović, Folkert J. van Kemenade, Patricia C. Ewing‐Graham
Software Mentions: 4
Published: over 3 years ago
10.1038/s41598-020-72535-0
Intensity harmonization techniques influence radiomics features and radiomics-based predictions in sarcoma patients
Cited by: 32
Author(s): Amandine Crombé, Michèle Kind, David Fadli, François Le Loarer, Antoîne Italiano, Xavier Buy, Olivier Saut
Software Mentions: 4
Published: about 4 years ago
10.1038/s41598-021-86720-2
Climate change and anthropogenic food manipulation interact in shifting the distribution of a large herbivore at its altitudinal range limit
Cited by: 8
Author(s): Julius G. Bright Ross, Wibke Peters, Federico Ossi, P. R. Moorcroft, E. Cordano, E. Eccel, Filippo Bianchini, Maurizio Ramanzin, Francesca Cagnacci
Software Mentions: 4
Published: over 3 years ago
10.1002/vro2.16
Accuracy of heart girth tapes in the estimation of weights of pre‐weaned calves
Cited by: 7
Author(s): Ginny Sherwin, Robert Hyde, Martin A. Green, John Remnant, Emily Payne, Peter Down
Software Mentions: 4
Published: over 3 years ago
10.1515/raon-2015-0024
Central nervous system imaging in childhood Langerhans cell histiocytosis – a reference center analysis
Cited by: 14
Author(s): Luciana Porto, Stefan Schöning, Elke Hattingen, Jan Tind Sørensen, Alina Jurcoane, Thomas Lehrnbecher
Software Mentions: 4
Published: over 9 years ago
10.1371/journal.pone.0232372
Clinical feasibility of ultrafast intracranial vessel imaging with non-Cartesian spiral 3D time-of-flight MR angiography at 1.5T: An intra-individual comparison study
Cited by: 10
Author(s): Thomas Sartoretti, Elisabeth Sartoretti, Árpád Schwenk, Luuk van Smoorenburg, Manoj Mannil, André Euler, Anton S. Becker, Alex Alfieri, Arash Najafi, Christoph A. Binkert, Michael Wyss, Sabine Sartoretti‐Schefer
Software Mentions: 4
Published: over 4 years ago
10.1186/s40168-020-00998-4
Repeatability and reproducibility assessment in a large-scale population-based microbiota study: case study on human milk microbiota
Cited by: 12
Author(s): Shirin Moossavi, Kelsey Fehr, Ehsan Khafipour, Meghan B. Azad
Software Mentions: 4
Published: almost 4 years ago
10.1186/s13002-021-00467-8
Comparative analysis of management practices and end-users’ desired breeding traits in the miracle plant [Synsepalum dulcificum (Schumach &amp; Thonn.) Daniell] across ecological zones and sociolinguistic groups in West Africa
Cited by: 7
Author(s): Dèdéou Apocalypse Tchokponhoué, Enoch G. Achigan‐Dako, Sognigbé N’Danikou, Daniel Nyadanu, Rémi Kahane, Alfred Odindo, Julia Sibiya
Software Mentions: 4
Published: over 3 years ago
10.1371/journal.pone.0169172
Associations of Radiomic Data Extracted from Static and Respiratory-Gated CT Scans with Disease Recurrence in Lung Cancer Patients Treated with SBRT
Cited by: 82
Author(s): Elizabeth Huynh, Thibaud Coroller, Vivek Narayan, Vishesh Agrawal, John Romano, Idalid Franco, Chintan Parmar, Ying Hou, Raymond H. Mak, Hugo J.W.L. Aerts
Software Mentions: 4
Published: almost 8 years ago
10.3390/ani9110894
The Reliability and Accuracy of Palpation, Radiography, and Sonography for the Detection of Keel Bone Damage
Cited by: 15
Author(s): Linnea M. Tracy, S Mieko Temple, Darin C. Bennett, Kim A. Sprayberry, Maja M. Makagon, Richard A. Blatchford
Software Mentions: 4
Published: about 5 years ago
10.3389/fvets.2021.630164
Anxiety Behavior in Pigs (Sus scrofa) Decreases Through Affiliation and May Anticipate Threat
Cited by: 11
Author(s): Ivan Norscia, Edoardo Collarini, Giada Cordoni
Software Mentions: 4
Published: almost 4 years ago
10.1186/s12877-018-0834-z
Item distribution and inter-rater reliability of the German version of the quality of life in Alzheimer’s disease scale (QoL-AD) proxy for people with dementia living in nursing homes
Cited by: 13
Author(s): Martin N. Dichter, Eva-Maria Wolschon, Christian Schwab, Gabriele Meyer, Sascha Köpke
Software Mentions: 4
Published: over 6 years ago
10.1161/CIRCIMAGING.120.011951
Automated Left Ventricular Dimension Assessment Using Artificial Intelligence Developed and Validated by a UK-Wide Collaborative
Cited by: 10
Author(s): James P. Howard, Catherine C. Stowell, Graham D. Cole, Kajaluxy Ananthan, Camelia Demetrescu, Keith Pearce, Ronak Rajani, Jobanpreet Sehmi, Kavitha Vimalesvaran, Gajen Kanaganayagam, E. Fred McPhail, Ashoke Kumar Ghosh, John Chambers, Amar Singh, Massoud Zolgharni, Bushra S. Rana, Dárrel P. Francis, Matthew Shun-Shin
Software Mentions: 4
Published: over 3 years ago
10.1371/journal.pone.0252226
Diagnostic accuracy of pelvic magnetic resonance imaging for the assessment of bone marrow involvement in diffuse large B-cell lymphoma
Cited by: 2
Author(s): Qing Ke, Chengcheng Liao, Xiaohong Tan, Baoqiang Guo, Hong Cen, Le‐Qun Li
Software Mentions: 4
Published: over 3 years ago
10.1186/s12918-018-0659-6
Optimizing gene set annotations combining GO structure and gene expression data
Cited by: 0
Author(s): Dong Wang, Jie Li, Rui Li, Yadong Wang
Software Mentions: 4
Published: almost 6 years ago
10.3389/fpsyg.2020.584231
Effects of Scale on Multimodal Deixis: Evidence From Quiahije Chatino
Cited by: 4
Author(s): Kate Mesh, Emiliana Cruz, Joost van de Weijer, Niclas Burenhult, Marianne Gullberg
Software Mentions: 4
Published: almost 4 years ago
10.1371/journal.pntd.0008655
Practical and effective diagnosis of animal anthrax in endemic low-resource settings
Cited by: 14
Author(s): Olubunmi Rhoda Aminu, Tiziana Lembo, Ruth N. Zadoks, Roman Biek, Suzanna Lewis, Ireen Kiwelu, Blandina T Mmbaga, Deogratius Mshanga, Gabriel Shirima, Matt Denwood, Taya Forde
Software Mentions: 4
Published: about 4 years ago
10.1186/s13075-021-02484-0
Deep learning for detection of radiographic sacroiliitis: achieving expert-level performance
Cited by: 30
Author(s): Keno K. Bressem, Janis L. Vahldiek, Lisa C. Adams, Stefan M. Niehues, Hildrun Haibel, V. Rios Rodriguez, Murat Torğutalp, Mikhail Protopopov, Fabian Proft, Judith Rademacher, Joachim Sieper, Martín Rudwaleit, Bernd Hamm, Marcus R. Makowski, Kay-Geert A. Hermann, Denis Poddubnyy
Software Mentions: 4
Published: over 3 years ago
10.3389/fonc.2021.544979
Machine Learning-Based Ultrasomics Improves the Diagnostic Performance in Differentiating Focal Nodular Hyperplasia and Atypical Hepatocellular Carcinoma
Cited by: 12
Author(s): Wei Li, Xiaozhou Lv, Xin Zheng, Si-Min Ruan, Hang-Tong Hu, Li-Da Chen, Yang Huang, Xin Li, Chu-Qing Zhang, Xian-Jin Xie, Ming Kuang, Ming‐De Lu, Bowen Zhuang, Wei Wang
Software Mentions: 4
Published: over 3 years ago