Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: igraph

https://packages.ecosyste.ms/registries/pypi.org/packages/igraph

High performance graph data structures and algorithms
28 versions
Latest release: about 1 year ago
126 dependent packages
1,074,658 downloads last month

Papers Mentioning igraph 1,555

10.18632/oncotarget.21783
Identification of potential prognostic ceRNA module biomarkers in patients with pancreatic adenocarcinoma
Cited by: 14
Author(s): Lili Zhao, Bing-Rong Liu
Software Mentions: 2
Published: about 7 years ago
10.1098/rsos.170808
Seasonality and pathogen transmission in pastoral cattle contact networks
Cited by: 40
Author(s): Kimberly VanderWaal, Marie L. J. Gilbertson, Sharon Okanga, Brian F. Allan, Meggan E. Craft
Software Mentions: 2
Published: almost 7 years ago
10.1098/rsos.180719
Contact chains of cattle farms in Great Britain
Cited by: 21
Author(s): Helen R. Fielding, Trevelyan J. McKinley, Matthew J. Silk, Richard J. Delahay, Robbie A. McDonald
Software Mentions: 2
Published: almost 6 years ago
10.1038/s42003-019-0440-4
Combined network analysis and machine learning allows the prediction of metabolic pathways from tomato metabolomics data
Cited by: 52
Author(s): David Toubiana, Rami Puzis, Lingling Wen, Noga Sikron, Assylay Kurmanbayeva, Aigerim Soltabayeva, María del Mar Rubio Wilhelmi, Nir Sade, Aaron Fait, Moshe Sagi, Eduardo Blumwald, Yuval Elovici
Software Mentions: 2
Published: over 5 years ago
10.1098/rsos.200116
The craniomandibular anatomy of the early archosauriform<i>Euparkeria capensis</i>and the dawn of the archosaur skull
Cited by: 20
Author(s): Roland B. Sookias, David W. Dilkes, Gabriela Sobral, Roger M. H. Smith, Frederik P Wolvaardt, Andrea B. Arcucci, Bhart‐Anjan S. Bhullar, Ingmar Werneburg
Software Mentions: 2
Published: over 4 years ago
10.1098/rsos.200950
Higher sociability leads to lower reproductive success in female kangaroos
Cited by: 11
Author(s): Clementine S. Menz, Alecia J. Carter, Emily C. Best, Natalie J. Freeman, Ross G. Dwyer, Simone P. Blomberg, Anne W. Goldizen
Software Mentions: 2
Published: over 4 years ago
10.1186/s12918-018-0655-x
Identification of active signaling pathways by integrating gene expression and protein interaction data
Cited by: 19
Author(s): Humayun Kabir, Ralph Patrick, Joshua W. K. Ho, Michael D. O’Connor
Software Mentions: 2
Published: almost 6 years ago
10.1038/s42003-021-02260-5
Serotonin signaling modulates aging-associated metabolic network integrity in response to nutrient choice in Drosophila melanogaster
Cited by: 3
Author(s): Yang Lyu, Daniel Promislow, Scott D. Pletcher
Software Mentions: 2
Published: over 3 years ago
10.1186/1752-0509-8-62
Identifying aging-related genes in mouse hippocampus using gateway nodes
Cited by: 12
Author(s): Kathryn Dempsey, Hesham Ali
Software Mentions: 2
Published: almost 11 years ago
10.1186/1752-0509-8-81
Two-layer modular analysis of gene and protein networks in breast cancer
Cited by: 6
Author(s): Alok Srivastava, Sushil Kumar, Ramakrishna Ramaswamy
Software Mentions: 2
Published: almost 11 years ago
10.1186/s12931-018-0952-3
SOX30 specially prevents Wnt-signaling to suppress metastasis and improve prognosis of lung adenocarcinoma patients
Cited by: 13
Author(s): Fei Han, Mingqian Zhang, Wenbin Liu, Limei Sun, Xianglin Hao, Yin Li, Xiao Jiang, Jia Cao, Jinyi Liu
Software Mentions: 2
Published: almost 6 years ago
10.1186/s12977-020-00541-1
Koala retrovirus diversity, transmissibility, and disease associations
Cited by: 12
Author(s): HaoQiang Zheng, Yi Pan, Shaohua Tang, Geoffrey W. Pye, Cynthia K. Stadler, Larry Vogelnest, Kimberly Vinette Herrin, Bruce A. Rideout, William M. Switzer
Software Mentions: 2
Published: about 4 years ago
10.1038/s42003-020-01190-y
Network pharmacology suggests biochemical rationale for treating COVID-19 symptoms with a Traditional Chinese Medicine
Cited by: 15
Author(s): Denghai Zhang, Xue Zhang, Bin Peng, Shengqiong Deng, Yufang Wang, Lin Yang, Kai-zheng Zhang, Changquan Ling, Wu Kunlun
Software Mentions: 2
Published: over 4 years ago
10.1093/cercor/bhz244
Ketamine Restores Thalamic-Prefrontal Cortex Functional Connectivity in a Mouse Model of Neurodevelopmental Disorder-Associated 2p16.3 Deletion
Cited by: 11
Author(s): Rebecca Hughes, Jayde Whittingham-Dowd, Rachel E Simmons, Steven J. Clapcote, Susan Broughton, Neil Dawson
Software Mentions: 2
Published: almost 5 years ago
10.1186/s12890-018-0603-y
RNAseq analysis of bronchial epithelial cells to identify COPD-associated genes and SNPs
Cited by: 20
Author(s): Ji‐Youn Yeo, Diego A. Morales, Tian Chen, Erin L. Crawford, Xiaolu Zhang, Thomas M. Blomquist, Albert M. Levin, Pierre P. Massion, Douglas A. Arenberg, David E. Midthun, Peter J. Mazzone, Steven D. Nathan, R. Wainz, Patrick Nana‐Sinkam, Paige F.S. Willey, Taylor J. Arend, Karanbir Padda, Shuhao Qiu, A. V. Federov, Dawn Alita R. Hernandez, Jeffrey R. Hammersley, Youngsook Yoon, Fadi Safi, Sadik A. Khuder, James C. Willey
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0205122
Social network properties predict chronic aggression in commercial pig systems
Cited by: 38
Author(s): Simone Foister, Andrea Doeschl‐Wilson, R. Roehe, Gareth Arnott, Laura Boyle, Simon P. Turner
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pone.0196211
Social network analysis of stakeholder networks from two community-based obesity prevention interventions
Cited by: 28
Author(s): Jaimie McGlashan, Melanie Nichols, Ariella R. Korn, Lynne Millar, Jennifer B. Marks, Andrew Sanigorski, Mark C. Pachucki, Boyd Swinburn, Steven Allender, Christina D. Economos
Software Mentions: 2
Published: over 6 years ago
10.1038/sdata.2016.46
A protocol to convert spatial polyline data to network formats and applications to world urban road networks
Cited by: 88
Author(s): Alireza Karduni, Amirhassan Kermanshah, Sybil Derrible
Software Mentions: 2
Published: over 8 years ago
10.1371/journal.pone.0198525
Exploring novel key regulators in breast cancer network
Cited by: 18
Author(s): Shahnawaz Ali, Md. Zubbair Malik, Keilash Chirom, Romana Ishrat
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0141420
A Network Approach to Bipolar Symptomatology in Patients with Different Course Types
Cited by: 29
Author(s): M.A. Koenders, Roy de Kleijn, Erik J. Giltay, Bernet M. Elzinga, Philip Spinhoven, Annet T. Spijker
Software Mentions: 2
Published: about 9 years ago
10.1038/sdata.2018.37
A dataset on human navigation strategies in foreign networked systems
Cited by: 3
Author(s): Attila Kő̈rösi, Attila Csoma, Gábor Rétvári, Zalán Heszberger, József Bı́ró, János Tapolcai, István Pelle, Dávid Klajbár, Márton Novák, Valentina Halasi, András Gulyás
Software Mentions: 2
Published: over 6 years ago
10.1038/s41597-019-0056-z
A multi-species repository of social networks
Cited by: 40
Author(s): Pratha Sah, José David Méndez, Shweta Bansal
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0014673
Controlling the Response: Predictive Modeling of a Highly Central, Pathogen-Targeted Core Response Module in Macrophage Activation
Cited by: 33
Author(s): Jason McDermott, Michelle Archuleta, Brian D. Thrall, Joshua N. Adkins, Katrina M. Waters
Software Mentions: 2
Published: almost 14 years ago
10.1186/1471-2458-8-308
Worldwide food recall patterns over an eleven month period: A country perspective
Cited by: 11
Author(s): Tamás Nepusz, Andrea Petróczi, Declan P. Naughton
Software Mentions: 2
Published: about 16 years ago
10.1038/srep07258
A Unifying Framework for Measuring Weighted Rich Clubs
Cited by: 61
Author(s): Jeff Alstott, Pietro Panzarasa, Mikail Rubinov, Edward T. Bullmore, Petra E. Vértes
Software Mentions: 2
Published: almost 10 years ago
10.1186/s12889-020-8338-0
Transport-related walking among young adults: when and why?
Cited by: 3
Author(s): Behrang Assemi, Renee Zahnow, Belén Zapata-Diomedi, Mark Hickman, Jonathan Corcoran
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.pone.0210148
Validation of modified radio-frequency identification tag firmware, using an equine population case study
Cited by: 4
Author(s): Rachael M. Milwid, Terri L. O’Sullivan, Zvonimir Poljak, Marek Laskowski, Amy L. Greer
Software Mentions: 2
Published: almost 6 years ago
10.1038/srep16439
Early maternal loss affects social integration of chimpanzees throughout their lifetime
Cited by: 27
Author(s): Elfriede Kalcher-Sommersguter, Signe Preuschoft, Cornelia Franz-Schaider, Charlotte K. Hemelrijk, Karl Crailsheim, Jorg J. M. Massen
Software Mentions: 2
Published: about 9 years ago
10.1186/s12919-018-0116-y
Application of Bayesian networks to GAW20 genetic and blood lipid data
Cited by: 4
Author(s): Richard Howey, Heather J. Cordell
Software Mentions: 2
Published: about 6 years ago
10.1038/srep17357
A novel algorithm for analyzing drug-drug interactions from MEDLINE literature
Cited by: 19
Author(s): Ling Yin, Dan Shen, Maxwell Pietsch, Chetan Nagar, Zayd Fadli, Hong Huang, Yi-Cheng Tu, Feng Cheng
Software Mentions: 2
Published: almost 9 years ago
10.1371/journal.pone.0064317
An Open-Access Modeled Passenger Flow Matrix for the Global Air Network in 2010
Cited by: 37
Author(s): Zhengjing Huang, Wu Xiao, Andrés J. García, Timothy J. Fik, Andrew J. Tatem
Software Mentions: 2
Published: over 11 years ago
10.1038/srep19845
Chimera-like States in Modular Neural Networks
Cited by: 140
Author(s): Johanne Hizanidis, Nikos E. Kouvaris, Gorka Zamora-López, Albert Díaz‐Guilera, Chris G. Antonopoulos
Software Mentions: 2
Published: almost 9 years ago
10.1038/srep21580
Integrated microRNA-mRNA analyses reveal OPLL specific microRNA regulatory network using high-throughput sequencing
Cited by: 37
Author(s): Chen Xu, Yu Chen, Hao Zhang, Yuanyuan Chen, Xiantao Shen, Changgui Shi, Yang Liu, Wen Yuan
Software Mentions: 2
Published: almost 9 years ago
10.18632/aging.202995
Gene expression signatures differentiating major depressive disorder from subsyndromal symptomatic depression
Cited by: 2
Author(s): Guoqin Hu, Shunying Yu, Chen Yuan, Hong Wu, Zuowei Wang, Ran Zhang, Dongxiang Wang, Zezhi Li, Zhenghui Yi, Yiru Fang
Software Mentions: 2
Published: over 3 years ago
10.1038/srep22470
Discovering communities in complex networks by edge label propagation
Cited by: 37
Author(s): Wei Liu, Xingpeng Jiang, Matteo Pellegrini, Xiaofan Wang
Software Mentions: 2
Published: over 8 years ago
10.1038/srep24160
Deletion and low expression of NFKBIA are associated with poor prognosis in lower-grade glioma patients
Cited by: 14
Author(s): Gabriela Sarti Kinker, Andrew Maltez Thomas, Vinicius Jardim Carvalho, Felipe Prata Lima, André Fujita
Software Mentions: 2
Published: over 8 years ago
10.1038/srep24570
Uncovering disease mechanisms through network biology in the era of Next Generation Sequencing
Cited by: 31
Author(s): Janet Piñero, Ariel Berenstein, Abel González-Pérez, Ariel Chernomoretz, Laura I. Furlong
Software Mentions: 2
Published: over 8 years ago
10.1186/s12866-021-02311-1
Effects of mulberry leaf silage on antioxidant and immunomodulatory activity and rumen bacterial community of lambs
Cited by: 12
Author(s): Bing Wang, Haiwei Luo
Software Mentions: 2
Published: about 3 years ago
10.1186/s12866-021-02092-7
Comparison and interpretation of characteristics of Rhizosphere microbiomes of three blueberry varieties
Cited by: 10
Author(s): Yan Zhang, Wei Wang, Zuorui Shen, Jingjing Wang, Yajun Chen, Dong Wang, Gang Liu, Maozhen Han
Software Mentions: 2
Published: almost 4 years ago
10.1371/journal.pone.0199530
A cytokine protein-protein interaction network for identifying key molecules in rheumatoid arthritis
Cited by: 10
Author(s): Venugopal Panga, Srivatsan Raghunathan
Software Mentions: 2
Published: over 6 years ago
10.7554/eLife.02863
Buffered Qualitative Stability explains the robustness and evolvability of transcriptional networks
Cited by: 34
Author(s): Luca Albergante, J. Julian Blow, T. J. Newman
Software Mentions: 2
Published: about 10 years ago
10.1038/srep29228
Integrative analysis of cancer genes in a functional interactome
Cited by: 6
Author(s): Matthew Ung, Chun-Chi Liu, Chao Cheng
Software Mentions: 2
Published: over 8 years ago
10.1371/journal.pone.0213039
GenomeGraphR: A user-friendly open-source web application for foodborne pathogen whole genome sequencing data integration, analysis, and visualization
Cited by: 20
Author(s): Moez Sanaa, Régis Pouillot, Francisco Garcés Vega, Errol Strain, Jane M. Van Doren
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0248126
Topological indexes and community structure for urban mobility networks: Variations in a business day
Cited by: 3
Author(s): Jéssica D. Lamosa, Lívia Rodrigues Tomás, Marcos G. Quiles, Luciana de Resende Londe, Leonardo B. L. Santos, Elbert E. N. Macau
Software Mentions: 2
Published: over 3 years ago
10.1038/srep30750
A Comparative Analysis of Community Detection Algorithms on Artificial Networks
Cited by: 451
Author(s): Yang Zhao, René Algesheimer, Claudio J. Tessone
Software Mentions: 2
Published: over 8 years ago
10.1038/srep31273
Multiple independent transmission cycles of a tick-borne pathogen within a local host community
Cited by: 10
Author(s): Maude Jacquot, David Abrial, Patrick Gasqui, Séverine Bord, Maud Marsot, Sébastien Masseglia, Angélique Pion, Valérie Poux, Laurence Zilliox, Jean‐Louis Chapuis, Gwenaël Vourc’H, Xavier Bailly
Software Mentions: 2
Published: over 8 years ago
10.1038/srep30790
Clustered marginalization of minorities during social transitions induced by co-evolution of behaviour and network structure
Cited by: 15
Author(s): Carl-Friedrich Schleußner, Jonathan F. Donges, Denis A. Engemann, Anders Levermann
Software Mentions: 2
Published: over 8 years ago
10.1038/srep31766
Systematic analysis of the regulatory functions of microRNAs in chicken hepatic lipid metabolism
Cited by: 29
Author(s): Hong Li, Zheng Ma, Lijuan Jia, Yanmin Li, Chunlin Xu, Taian Wang, Ruili Han, Ruirui Jiang, Zhuanjian Li, Guirong Sun, Xiangtao Kang, Xiaojun Liu
Software Mentions: 2
Published: over 8 years ago
10.1038/srep31790
Infection-induced behavioural changes reduce connectivity and the potential for disease spread in wild mice contact networks
Cited by: 145
Author(s): Patrícia C. Lopes, Per Block, Barbara König
Software Mentions: 2
Published: over 8 years ago
10.1371/journal.pone.0252152
Social network analysis and whole-genome sequencing to evaluate disease transmission in a large, dynamic population: A study of avian mycobacteriosis in zoo birds
Cited by: 2
Author(s): Carmel Witte, James H. Fowler, Wayne Pfeiffer, Laura L. Hungerford, Joséphine Braun, Jennifer Burchell, Rebecca Papendick, Bruce A. Rideout
Software Mentions: 2
Published: over 3 years ago
10.1038/srep35432
Widespread occurrence of lysine methylation in Plasmodium falciparum proteins at asexual blood stages
Cited by: 18
Author(s): Inderjeet Kaur, Mohammad Zeeshan, Ekta Saini, Abhinav Kaushik, Asif Mohmmed, Dinesh Gupta, Pawan Malhotra
Software Mentions: 2
Published: about 8 years ago
10.1038/srep36572
A Comprehensive Characterization of the Function of LincRNAs in Transcriptional Regulation Through Long-Range Chromatin Interactions
Cited by: 19
Author(s): Liuyang Cai, Huidan Chang, Yaping Fang, Guoliang Li
Software Mentions: 2
Published: about 8 years ago
10.1038/srep37329
Exploring Spatio-temporal Dynamics of Cellular Automata for Pattern Recognition in Networks
Cited by: 10
Author(s): Gisele Helena Barboni Miranda, Jeaneth Machicao, Odemir Martinez Bruno
Software Mentions: 2
Published: almost 8 years ago
10.1371/journal.pone.0191604
Resolution of ranking hierarchies in directed networks
Cited by: 12
Author(s): Elisa Letizia, Paolo Barucca, Fabrizio Lillo
Software Mentions: 2
Published: almost 7 years ago
10.1371/journal.pone.0142108
Network-Based and Binless Frequency Analyses
Cited by: 20
Author(s): Sybil Derrible, Nasir Ahmad
Software Mentions: 2
Published: about 9 years ago
10.1038/srep41817
Drivers of Cape Verde archipelagic endemism in keyhole limpets
Cited by: 12
Author(s): Regina L. Cunha, Jorge Assis, Céline Madeira, Rui Seabra, Fernando P. Lima, Evandro P. Lopes, Suzanne T. Williams, Rita Castilho
Software Mentions: 2
Published: almost 8 years ago
10.1371/journal.pone.0187304
Identification of proteins associated with clinical and pathological features of proliferative diabetic retinopathy in vitreous and fibrovascular membranes
Cited by: 46
Author(s): Ingeborg Klaassen, Ewout de Vries, I. M. C. Vogels, Antoine H. C. van Kampen, Machteld I. Bosscha, David Steel, C. J. F. Van Noorden, S.Y. Lesnik–Oberstein, Reinier O. Schlingemann
Software Mentions: 2
Published: about 7 years ago
10.1155/2009/182689
Network Properties for Ranking Predicted miRNA Targets in Breast Cancer
Cited by: 4
Author(s): Jörg Linde, Björn Olsson, Zelmina Lubovac
Software Mentions: 2
Published: over 15 years ago
10.1371/journal.pone.0046156
Combining Epidemiological and Genetic Networks Signifies the Importance of Early Treatment in HIV-1 Transmission
Cited by: 16
Author(s): Narges Zarrabi, Mattia Prosperi, R.G. Belleman, Manuela Colafigli, Andrea De Luca, Peter M. A. Sloot
Software Mentions: 2
Published: about 12 years ago
10.1038/srep44052
Individual Movement Strategies Revealed through Novel Clustering of Emergent Movement Patterns
Cited by: 19
Author(s): Denis Valle, Sreten Cvetojevic, Ellen P. Robertson, Brian E. Reichert, Hartwig H. Hochmair, Robert J. Fletcher
Software Mentions: 2
Published: over 7 years ago
10.1371/journal.pone.0228613
Tropical marine sciences: Knowledge production in a web of path dependencies
Cited by: 22
Author(s): Stefan Partelow, Anna‐Katharina Hornidge, Paula Sobral, Moritz Stäbler, Achim Schlüter
Software Mentions: 2
Published: almost 5 years ago
10.1186/1755-8794-6-S2-S2
Key genes for modulating information flow play a temporal role as breast tumor coexpression networks are dynamically rewired by letrozole
Cited by: 5
Author(s): Nadia M. Penrod, Jason H. Moore
Software Mentions: 2
Published: almost 12 years ago
10.1038/srep08298
Anatomical networks reveal the musculoskeletal modularity of the human head
Cited by: 57
Author(s): Borja Esteve‐Altava, Rui Diogo, Christopher M. Smith, Julia C. Boughner, Diego Rasskin‐Gutman
Software Mentions: 2
Published: almost 10 years ago
10.1371/journal.pone.0237864
The dynamics of global R&amp;D collaboration networks in ICT: Does China catch up with the US?
Cited by: 5
Author(s): Thomas Scherngell, Charlotte Rohde, Martina Neuländtner
Software Mentions: 2
Published: about 4 years ago
10.1186/s12879-019-3734-8
Social network analysis and whole genome sequencing in a cohort study to investigate TB transmission in an educational setting
Cited by: 15
Author(s): Simon Packer, Claire Green, Ellen Brooks-Pollock, Katerina Chaintarli, Sarah Harrison, Charles R. Beck
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0013139
Inference of Surface Membrane Factors of HIV-1 Infection through Functional Interaction Networks
Cited by: 9
Author(s): Samira Jaeger, Gökhan Ertaylan, David van Dijk, Ulf Leser, Peter M. A. Sloot
Software Mentions: 2
Published: about 14 years ago
10.1038/s41598-017-05855-3
Population structure of an orchid mycorrhizal fungus with genus-wide specificity
Cited by: 14
Author(s): Monica Ruibal, Yann Triponez, Leon M. Smith, Rod Peakall, Celeste C. Linde
Software Mentions: 2
Published: over 7 years ago
10.1371/journal.pone.0099502
Co-Authorship and Bibliographic Coupling Network Effects on Citations
Cited by: 86
Author(s): Claudio Biscaro, Carlo Giupponi
Software Mentions: 2
Published: over 10 years ago
10.1186/s12879-017-2529-z
Patterns of antimicrobial resistance in intensive care unit patients: a study in Vietnam
Cited by: 31
Author(s): Giang M. Tran, Thao P. Ho-Le, Duc T. Ha, Chau H. Tran-Nguyen, Tuyet S. M. Nguyen, Thao Thi Ngoc Pham, Thao Thi Thu Nguyen, Dung Nguyen, Hoa Q. Hoang, Ngoc Van Tran, Tuan V. Nguyen
Software Mentions: 2
Published: over 7 years ago
10.1038/s41598-017-06624-y
Identification of clusters of rapid and slow decliners among subjects at risk for Alzheimer’s disease
Cited by: 60
Author(s): Dragan Gamberger, Nada Lavrač, Shantanu Srivatsa, Rudolph E. Tanzi, P. Murali Doraiswamy
Software Mentions: 2
Published: over 7 years ago
10.1038/s41598-017-07202-y
Dynamics of the Global Wheat Trade Network and Resilience to Shocks
Cited by: 53
Author(s): Kathyrn R. Fair, Chris T. Bauch, Madhur Anand
Software Mentions: 2
Published: over 7 years ago
10.1371/journal.pone.0252470
Environmental drivers of reef manta ray (Mobula alfredi) visitation patterns to key aggregation habitats in the Maldives
Cited by: 6
Author(s): Joanna L. Harris, Guy M. W. Stevens
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pone.0157868
Analysis of the Effect of Degree Correlation on the Size of Minimum Dominating Sets in Complex Networks
Cited by: 10
Author(s): Kazuhiro Takemoto, Tatsuya Akutsu
Software Mentions: 2
Published: over 8 years ago
10.1371/journal.pone.0214857
Building the drug-GO function network to screen significant candidate drugs for myasthenia gravis
Cited by: 5
Author(s): Shuang Li, Yuze Cao, Lei Li, Huixue Zhang, Xiaoyu Lu, Chunrui Bo, Xiaotong Kong, Zhaojun Liu, Lixia Chen, Peifang Liu, Yang Jiao, Jianjian Wang, Shangwei Ning, Lihua Wang
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0121368
Changes of Soil Particle Size Distribution in Tidal Flats in the Yellow River Delta
Cited by: 26
Author(s): Xiaofei Lyu, Junbao Yu, Mo Zhou, Ben Ma, Guangmei Wang, Chuanlang Zhan, Guoqi Han, Bo Guan, Huifeng Wu, Yunzhao Li, Wang De
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0176978
Metabolomic homeostasis shifts after callus formation and shoot regeneration in tomato
Cited by: 14
Author(s): Alka Kumari, Kamalika Ray, Sadhna Sadhna, Arun K. Pandey, Yellamaraju Sreelakshmi, Rameshwar Sharma
Software Mentions: 2
Published: over 7 years ago
10.1038/s41598-017-12325-3
Drug enrichment and discovery from schizophrenia genome-wide association results: an analysis and visualisation approach
Cited by: 51
Author(s): Héléna A. Gaspar, Gerome Breen
Software Mentions: 2
Published: about 7 years ago
10.1371/journal.pone.0179281
Quantifying the web browser ecosystem
Cited by: 6
Author(s): Sela Ferdman, Einat Minkov, Ron Bekkerman, David Gefen
Software Mentions: 2
Published: over 7 years ago
10.1186/s12913-019-4084-3
Involving end-users in the design of an audit and feedback intervention in the emergency department setting – a mixed methods study
Cited by: 16
Author(s): Welmoed K. van Deen, Edward S. Cho, Kathryn Pustolski, Dennis Wixon, Shona Lamb, Thomas W. Valente, Michael Menchine
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0234990
The association between patient sharing network structure and healthcare costs
Cited by: 12
Author(s): Kimberley H. Geissler, Benjamin Lubin, Keith M. Marzilli Ericson
Software Mentions: 2
Published: over 4 years ago
10.1038/s41598-017-15647-4
Network-based analysis of diagnosis progression patterns using claims data
Cited by: 28
Author(s): Eugene Jeong, Kyungmin Ko, Seungbin Oh, Hyun Wook Han
Software Mentions: 2
Published: about 7 years ago
10.1371/journal.pone.0257449
Biofilm microbiome in extracorporeal membrane oxygenator catheters
Cited by: 6
Author(s): Yeuni Yu, Yun Hak Kim, Woo Hyun Cho, Bong Soo Son, Hye Ju Yeo
Software Mentions: 2
Published: about 3 years ago
10.1186/s12913-018-3038-5
On designing of a low leakage patient-centric provider network
Cited by: 5
Author(s): Yuchen Zheng, Lin Kang, Thomas White, Jeremy Pickreign, Gigi Yuen-Reed
Software Mentions: 2
Published: over 6 years ago
10.1038/s41598-018-19532-6
Phosphorylation of the Transient Receptor Potential Ankyrin 1 by Cyclin-dependent Kinase 5 affects Chemo-nociception
Cited by: 19
Author(s): Bradford Hall, Michaela Procházková, Matthew R. Sapio, Paul D. Minetos, Natalya Kurochkina, B. Binukumar, Niranjana D. Amin, Anita Terse, John Joseph, Stephen J. Raithel, Andrew J. Mannes, Harish C. Pant, Man‐Kyo Chung, Michael J. Iadarola, Ashok B. Kulkarni
Software Mentions: 2
Published: almost 7 years ago
10.1371/journal.pone.0099424
Human Genome Variation and the Concept of Genotype Networks
Cited by: 18
Author(s): Giovanni Marco Dall’Olio, Jaume Bertranpetit, Andreas Wagner, Hafid Laayouni
Software Mentions: 2
Published: over 10 years ago
10.1038/s41598-018-20215-5
Comprehensive network of miRNA-induced intergenic interactions and a biological role of its core in cancer
Cited by: 23
Author(s): Vladimir Galatenko, A. V. Galatenko, Timur R. Samatov, Andrey Turchinovich, M. Yu. Shkurnikov, J. A. Makarova, Alexander G. Tonevitsky
Software Mentions: 2
Published: almost 7 years ago
10.1371/journal.pone.0048740
Between-Group Variation in Female Dispersal, Kin Composition of Groups, and Proximity Patterns in a Black-and-White Colobus Monkey (Colobus vellerosus)
Cited by: 40
Author(s): Eva C. Wikberg, Pascale Sicotte, Fernando A. Campos, Nelson Ting
Software Mentions: 2
Published: about 12 years ago
10.1186/s12864-017-3777-4
Functional regression method for whole genome eQTL epistasis analysis with sequencing data
Cited by: 3
Author(s): Kelin Xu, Li Jin, Momiao Xiong
Software Mentions: 2
Published: over 7 years ago
10.1371/journal.pone.0221833
Social network analysis and the implications for Pontocaspian biodiversity conservation in Romania and Ukraine: A comparative study
Cited by: 10
Author(s): Aleksandre Gogaladze, Niels Raes, Jacobus C. Biesmeijer, Camelia Ionescu, Ana Bianca Pavel, Mikhail O. Son, Natalia Gozak, Vitaliy V. Anistratenko, Frank P. Wesselingh
Software Mentions: 2
Published: about 4 years ago
10.1371/journal.pone.0020284
Gene-Disease Network Analysis Reveals Functional Modules in Mendelian, Complex and Environmental Diseases
Cited by: 161
Author(s): Anna Bauer-Mehren, Markus Bundschus, Michael Rautschka, Miguel Ángel Mayer, Ferrán Sanz, Laura I. Furlong
Software Mentions: 2
Published: over 13 years ago
10.1371/journal.pone.0091724
The Impact of Movements and Animal Density on Continental Scale Cattle Disease Outbreaks in the United States
Cited by: 57
Author(s): Michael Buhnerkempe, Michael J. Tildesley, Tom Lindström, Daniel A. Grear, Katie Portacci, Ryan S. Miller, Jason E. Lombard, Marleen Werkman, Matthew James Keeling, Uno Wennergren, Colleen T. Webb
Software Mentions: 2
Published: over 10 years ago
10.1371/journal.pone.0094022
Identification of Thyroid Carcinoma Related Genes with mRMR and Shortest Path Approaches
Cited by: 18
Author(s): Yaping Xu, Yue Deng, Zhenhua Ji, Haibin Liu, Yueyang Liu, Peisong Hu, Jian Wu, Jian‐Gao Fan
Software Mentions: 2
Published: over 10 years ago
10.1371/journal.pone.0112928
Marked Microevolution of a Unique Mycobacterium tuberculosis Strain in 17 Years of Ongoing Transmission in a High Risk Population
Cited by: 29
Author(s): Carolina Mehaffy, Jennifer L. Guthrie, David C. Alexander, Rebecca Stuart, Elizabeth Rea, Frances Jamieson
Software Mentions: 2
Published: about 10 years ago
10.1038/s41598-018-25262-6
First anatomical network analysis of fore- and hindlimb musculoskeletal modularity in bonobos, common chimpanzees, and humans
Cited by: 6
Author(s): Rui Diogo, Júlia Molnár, Campbell Rolian, Borja Esteve‐Altava
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0068927
Spatial Structures of the Environment and of Dispersal Impact Species Distribution in Competitive Metacommunities
Cited by: 21
Author(s): Dexiecuo Ai, Dominique Gravel, Chengjin Chu, Gang Wang
Software Mentions: 2
Published: over 11 years ago
10.1371/journal.pone.0138148
Analysing Local Sparseness in the Macaque Brain Network
Cited by: 0
Author(s): R. V. Singh, Seema Nagar, Amit A. Nanavati
Software Mentions: 2
Published: about 9 years ago
10.1038/s41598-018-28375-0
Assessment of the key regulatory genes and their Interologs for Turner Syndrome employing network approach
Cited by: 25
Author(s): Anam Farooqui, Safia Tazyeen, Mohd Murshad Ahmed, Aftab Alam, Shahnawaz Ali, Md. Zubbair Malik, Romana Ishrat
Software Mentions: 2
Published: over 6 years ago
10.1186/s12859-016-1013-x
CompNet: a GUI based tool for comparison of multiple biological interaction networks
Cited by: 29
Author(s): Bhusan K. Kuntal, Anirban Dutta, Sharmila S. Mande
Software Mentions: 2
Published: over 8 years ago
10.1186/s12864-019-6302-0
A novel algorithm for alignment of multiple PPI networks based on simulated annealing
Cited by: 2
Author(s): Jialu Hu, Junhao He, Jing Li, Yiqun Gao, Yanyan Zheng, Xuequn Shang
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41598-018-31110-4
Computational characterization and identification of human polycystic ovary syndrome genes
Cited by: 14
Author(s): Xingzhong Zhang, Yanli Pang, Xian Wang, Yanhui Li
Software Mentions: 2
Published: about 6 years ago