Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: gse

https://packages.ecosyste.ms/registries/pypi.org/packages/gse

extract metadata and dataset from GEO Series Matrix format data
3 versions
Latest release: over 10 years ago
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Papers Mentioning gse 7

Meta-analysis of gene expression profiles of lean and obese PCOS to identify differentially regulated pathways and risk of comorbidities
Cited by: 10
Author(s): Susan Idicula‐Thomas, Ulka Gawde, Sameeksha Bhaye, Khushal Pokar, Gary D. Bader
Software Mentions: 8
Published: almost 5 years ago

10.1002/2211-5463.12747

Prediction of a miRNA‐mRNA functional synergistic network for cervical squamous cell carcinoma
Cited by: 5
Author(s): Dan Sun, Lu Han, Rui Cao, Huali Wang, Jiyong Jiang, Yue Deng, Xiaohui Yu
Software Mentions: 4
Published: almost 5 years ago

10.1002/brb3.1319

Identification of key genes and upstream regulators in ischemic stroke
Cited by: 8
Author(s): Qian Zhang, Wenjie Chen, Siqia Chen, Shunxian Li, Dang Wei, Wenzhen He
Software Mentions: 2
Published: over 5 years ago

10.1002/cam4.3799

Discovery and validation of novel biomarkers for detection of cervical cancer
Cited by: 13
Author(s): Zigang Li, Jianhua Chen, Shaobo Zhao, Yajun Li, Jingtao Zhou, Jianghong Liang, Huifang Tang
Software Mentions: 2
Published: over 3 years ago

10.1186/s12887-020-02480-4

Identification of pathogenic genes and transcription factors in respiratory syncytial virus
Cited by: 5
Author(s): Lei Li, Yong An Ni, Zhenfeng Song, Zhi Ye, Fang Wang
Software Mentions: 2
Published: almost 4 years ago

10.1038/s41598-019-56339-5

PulmonDB: a curated lung disease gene expression database
Cited by: 11
Author(s): Ana B. Villaseñor-Altamirano, Marco Moretto, M. Maldonado, Alejandra Zayas-Del Moral, Adrián Munguía-Reyes, Yair Romero, Jair Santiago García-Sotelo, L. A. Aguilar, Oscar Aldana-Assad, Kristof Engelen, Moisés Selman, Julio Collado‐Vides, Yalbi I. Balderas-Martínez, Alejandra Medina-Rivera
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41598-021-95733-w

Comparative transcriptome analyses reveal genes associated with SARS-CoV-2 infection of human lung epithelial cells
Cited by: 11
Author(s): Darshan S. Chandrashekar, Mohammad Athar, Upender Manne, Sooryanarayana Varambally
Software Mentions: 1
Published: about 3 years ago