Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: gneiss
https://packages.ecosyste.ms/registries/pypi.org/packages/gneiss
Compositional data analysis tools and visualizations
11 versions
Latest release: about 5 years ago
43 downloads last month
Papers Mentioning gneiss 14
10.1038/s41598-020-76792-x
Energy depletion and opportunistic microbial colonisation in white syndrome lesions from corals across the Indo-PacificCited by: 3
Author(s): Hillary A. Smith, Jessica A. Conlan, F. Joseph Pollock, Naohiro Wada, Amanda Shore, Julia Yun-Hsuan Hung, Greta S. Aeby, Bette L. Willis, David S. Francis, David G. Bourne
Software Mentions: 9
Published: about 4 years ago
10.3389/fmicb.2020.01846
The Impact of Mercury Selection and Conjugative Genetic Elements on Community Structure and Resistance Gene TransferCited by: 14
Author(s): James P. J. Hall, Ellie Harrison, Katariina Pärnänen, Marko Virta, Michael A. Brockhurst
Software Mentions: 5
Published: over 4 years ago
10.1038/s41598-020-71592-9
Long-term effects of western diet consumption in male and female miceCited by: 23
Author(s): Yu Hasegawa, Shin-Yu Chen, Lili Sheng, Prasant Kumar Jena, Karen M. Kalanetra, David A. Mills, Yu Wan, Carolyn M. Slupsky
Software Mentions: 4
Published: about 4 years ago
10.1080/19490976.2020.1785246
Dysbiosis in a canine model of human fistulizing Crohn’s diseaseCited by: 9
Author(s): Ana Maldonado‐Contreras, Lluís Ferrer, Caitlin Cawley, Sarah Crain, Shakti Bhattarai, Juan F Toscano, Doyle V. Ward, Andrew M. Hoffman
Software Mentions: 4
Published: over 4 years ago
10.1128/mSystems.00162-16
Balance Trees Reveal Microbial Niche DifferentiationCited by: 217
Author(s): James T. Morton, Jon G. Sanders, Robert A. Quinn, Daniel McDonald, Antonio González, Yoshiki Vázquez-Baeza, José A. Navas-Molina, Se Jin Song, Jessica L. Metcalf, Embriette R. Hyde, Manuel E. Lladser, Pieter C. Dorrestein, Rob Knight
Software Mentions: 4
Published: over 7 years ago
10.7717/peerj.12229
Large-scale differences in diversity and functional adaptations of prokaryotic communities from conserved and anthropogenically impacted mangrove sediments in a tropical estuaryCited by: 5
Author(s): Carolina Oliveira de Santana, Pieter Spealman, Vânia Maria Maciel Melo, David Gresham, Taise de Jesus, Eddy José Francisco de Oliveira, Fábio Alexandre Chinalia
Software Mentions: 3
Published: about 3 years ago
10.3389/fmicb.2018.02985
Enriching Beneficial Microbial Diversity of Indoor Plants and Their Surrounding Built Environment With BiostimulantsCited by: 18
Author(s): Alexander Mahnert, Marika Haratani, Maria Schmuck, Gabriele Berg
Software Mentions: 3
Published: almost 6 years ago
10.1128/mSystems.00225-18
Salinity Is a Key Determinant for Soil Microbial Communities in a Desert EcosystemCited by: 199
Author(s): Kaoping Zhang, Yu Shi, Xiaoqing Cui, Ping Yue, Kaihui Li, Xuejun Liu, Binu M. Tripathi, Haiyan Chu
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0223629
Microbiomes in the insectivorous bat species Mops condylurus rapidly converge in captivityCited by: 16
Author(s): Kathryn M. Edenborough, Andre Mu, Kristin Mühldorfer, Johanna Lechner, Angelika Lander, Marcel Bokelmann, Emmanuel Couacy‐Hymann, Aleksandar Radonić, Andreas Kurth
Software Mentions: 2
Published: over 4 years ago
10.1371/journal.pone.0241447
Cerumen microbial community shifts between healthy and otitis affected dogsCited by: 8
Author(s): Giorgia Borriello, Rubina Paradiso, Carlotta Catozzi, Roberta Brunetti, P. Roccabianca, Marita Georgia Riccardi, Bianca Cecere, Cristina Lecchi, Giovanna Fusco, Fabrizio Ceciliani, Giorgio Galiero
Software Mentions: 2
Published: almost 4 years ago
10.1038/s41598-019-49823-5
Benchmarking urine storage and collection conditions for evaluating the female urinary microbiomeCited by: 23
Author(s): Carrie E. Jung, Jessica Chopyk, Ji Hyun Shin, Emily S. Lukacz, Linda Brubaker, Leila K. Schwanemann, Rob Knight, Alan J. Wolfe, David T. Pride
Software Mentions: 2
Published: about 5 years ago
10.1128/mSystems.00166-16
Uncovering the Horseshoe Effect in Microbial AnalysesCited by: 58
Author(s): James T. Morton, Liam Toran, Anna Edlund, Jessica L. Metcalf, Christian L. Lauber, Rob Knight
Software Mentions: 2
Published: over 7 years ago
10.1002/mnfr.201900927
Mastiha (<i>Pistacia lentiscus</i>) Improves Gut Microbiota Diversity, Hepatic Steatosis, and Disease Activity in a Biopsy‐Confirmed Mouse Model of Advanced Non‐Alcoholic Steatohepatitis and FibrosisCited by: 19
Author(s): Aimo Kannt, Efstathia Papada, Claire Kammermeier, Giuseppe D’Auria, Nuria Jiménez‐Hernández, Martin Stephan, Uwe Schwahn, Andreas Nygaard Madsen, Morten Østergaard, George Dedoussis, M. Pilar Francino
Software Mentions: 1
Published: about 5 years ago
10.1111/1365-2478.12883
Probing crustal anisotropy by receiver functions at the deep continental drilling site KTB in Southern GermanyCited by: 4
Author(s): Irene Bianchi, Götz Bokelmann
Software Mentions: 1
Published: about 5 years ago