Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: fit
https://packages.ecosyste.ms/registries/pypi.org/packages/fit
FIT file I/O
2 versions
Latest release: about 10 years ago
264 downloads last month
Papers Mentioning fit 24
10.1371/journal.pcbi.1008757
Using neural networks to mine text and predict metabolic traits for thousands of microbesCited by: 4
Author(s): Timothy J. Hackmann, Bo Zhang
Software Mentions: 8
Published: over 3 years ago
10.3758/s13428-017-0910-x
How well do network models predict observations? On the importance of predictability in network modelsCited by: 213
Author(s): Jonas M B Haslbeck, Lourens J. Waldorp
Software Mentions: 4
Published: about 7 years ago
10.1093/bioinformatics/btu166
relax: the analysis of biomolecular kinetics and thermodynamics using NMR relaxation dispersion dataCited by: 44
Author(s): Sébastien Morin, Troels Emtekær Linnet, Mathilde Lescanne, Paul Schanda, Gary S. Thompson, Martin Tollinger, Kaare Teilum, Stéphane M. Gagné, Dominique Marion, Christian Griesinger, Martin Blackledge, Edward J. d’Auvergne
Software Mentions: 4
Published: over 10 years ago
10.7554/eLife.24836
Minimal-assumption inference from population-genomic dataCited by: 21
Author(s): Daniel B. Weissman, Oskar Hallatschek
Software Mentions: 4
Published: about 7 years ago
10.3390/e22020153
Selection Consistency of Lasso-Based Procedures for Misspecified High-Dimensional Binary Model and Random RegressorsCited by: 2
Author(s): Mariusz Kubkowski, Jan Mielniczuk
Software Mentions: 4
Published: over 4 years ago
10.1002/2211-5463.12281
The periplasmic binding protein NrtT affects xantham gum production and pathogenesis in <i>Xanthomonas citri</i>Cited by: 4
Author(s): Aline P. Sampaio, Vanessa Rodrigues Pegos, Elisa Emiko Oshiro, Andrea Balan
Software Mentions: 3
Published: about 7 years ago
10.1371/journal.pgen.1004182
The First Steps of Adaptation of Escherichia coli to the Gut Are Dominated by Soft SweepsCited by: 164
Author(s): João Barroso-Batista, Ana Sousa, Marta Ribeiro Alves Lourenço, Marie‐Louise Bergman, Daniel Sobral, Jocelyne Demengeot, Karina B. Xavier, Isabel Gordo
Software Mentions: 2
Published: over 10 years ago
10.1186/1742-9994-7-14
Molluscan mega-hemocyanin: an ancient oxygen carrier tuned by a ~550 kDa polypeptideCited by: 28
Author(s): Bernhard Lieb, Wolfgang Gebauer, Christos Gatsogiannis, Frank Depoix, Nadja Hellmann, M. G. Harasewych, Ellen E. Strong, Jürgen Markl
Software Mentions: 2
Published: over 14 years ago
10.3390/microorganisms8060936
A Differential Metabarcoding Approach to Describe Taxonomy Profiles of Bacteria and Archaea in the Saltern of Margherita di Savoia (Italy)Cited by: 19
Author(s): Claudia Leoni, Mariateresa Volpicella, Bruno Fosso, Caterina Manzari, Elisabetta Piancone, Maria C.G. Dileo, Erika Arcadi, Michail M. Yakimov, Graziano Pesole, Luigi R. Ceci
Software Mentions: 2
Published: about 4 years ago
10.7554/eLife.51602
Cardiac ryanodine receptor distribution is dynamic and changed by auxiliary proteins and post-translational modificationCited by: 38
Author(s): Parisa Asghari, David R.L. Scriven, Myles Ng, Pankaj Panwar, Kuang-Chao Chou, Filip Van Petegem, Edwin D.W. Moore
Software Mentions: 2
Published: over 4 years ago
10.1186/s12859-020-03863-1
The MOBSTER R package for tumour subclonal deconvolution from bulk DNA whole-genome sequencing dataCited by: 13
Author(s): Giulio Caravagna, Guido Sanguinetti, Trevor A. Graham, Andrea Sottoriva
Software Mentions: 1
Published: almost 4 years ago
10.1002/2211-5463.12153
The activity of a yeast Family 16 methyltransferase, Efm2, is affected by a conserved tryptophan and its N‐terminal regionCited by: 4
Author(s): Joshua J. Hamey, Gene Hart‐Smith, Melissa A. Erce, Marc R. Wilkins
Software Mentions: 1
Published: almost 8 years ago
10.3389/fncel.2019.00372
Ketamine-Treatment During Late Adolescence Impairs Inhibitory Synaptic Transmission in the Prefrontal Cortex and Working Memory in Adult RatsCited by: 11
Author(s): Miguel A. Pérez, Cristián Morales, Odra Santander, F. Barrero, Isabel Gómez, Valentín Peñaloza‐Sancho, Pablo Fuentealba, Alexies Dagnino‐Subiabre, Pablo R. Moya, Marco Fuenzalida
Software Mentions: 1
Published: about 5 years ago
10.1007/s10827-012-0413-9
High-capacity embedding of synfire chains in a cortical network modelCited by: 19
Author(s): Chris Trengove, Cees van Leeuwen, Markus Diesmann
Software Mentions: 1
Published: about 12 years ago
10.3390/polym8110382
Synthesis and Characterization of Two-Dimensional Conjugated Polymers Incorporating Electron-Deficient Moieties for Application in Organic PhotovoltaicsCited by: 4
Author(s): Chuen-Yo Hsiow, Hanying Wang, Yi-Sheng Lin, Rathinam Raja, Syang‐Peng Rwei, Wen‐Yen Chiu, Chi‐An Dai, Leeyih Wang
Software Mentions: 1
Published: almost 8 years ago
10.1038/s41598-017-03663-3
Discovery and identification of O, O-diethyl O-(4-(5-phenyl-4, 5-dihydroisoxazol-3-yl) phenyl) phosphorothioate (XP-1408) as a novel mode of action of organophosphorus insecticidesCited by: 4
Author(s): Zhigang Zeng, Ying Yan, Bingfeng Wang, Niu Liu, Hanhong Xu
Software Mentions: 1
Published: over 7 years ago
10.1186/s40064-016-2387-y
Drying kinetics and mathematical modeling of hot air drying of coconut coir pithCited by: 27
Author(s): J. A. K. M. Fernando, Adus Amarasinghe
Software Mentions: 1
Published: about 8 years ago
10.1016/j.jmb.2008.12.043
The Escherichia coli Cell Division Protein and Model Tat Substrate SufI (FtsP) Localizes to the Septal Ring and Has a Multicopper Oxidase-Like StructureCited by: 52
Author(s): M.J. Tarry, S J Ryan Arends, Pietro Roversi, Evan W. Piette, Frank Sargent, Ben C. Berks, David S. Weiss, Susan M. Lea
Software Mentions: 1
Published: over 15 years ago
10.1002/brb3.998
Cortical brain structure and sexual orientation in adult females with bipolar disorder or attention deficit hyperactivity disorderCited by: 8
Author(s): Christoph Abé, Qazi Rahman, Niklas Långström, Eleonore Rydén, Martin Ingvar, Mikael Landén
Software Mentions: 1
Published: over 6 years ago
10.1155/2015/530828
Using the eServices Platform for Detecting Behavior Patterns Deviation in the Elderly Assisted Living: A Case StudyCited by: 9
Author(s): Isabel Marcelino, David Ferreira Lopes, Michael Reis, Fernando José Silva, Rosalía Laza, António Pereira
Software Mentions: 1
Published: over 9 years ago
10.1186/s12891-016-1208-3
A prospective pilot study to evaluate an animated home-based physical exercise program as a treatment option for patients with rheumatoid arthritisCited by: 10
Author(s): Jan Zernicke, Claudia Kedor, Angela Müller, Gerd–Rüdiger Burmester, Anett Reißhauer, Eugen Feist
Software Mentions: 1
Published: about 8 years ago
10.3390/cells9030543
Calcium- and Voltage-Dependent Dual Gating ANO1 is an Intrinsic Determinant of Repolarization in Rod Bipolar Cells of the Mouse RetinaCited by: 3
Author(s): Sun-Sook Paik, Yong Soo Park, In‐Beom Kim
Software Mentions: 1
Published: over 4 years ago
10.1155/2013/640861
A Low-Cost Point-of-Care Testing System for Psychomotor Symptoms of Depression Affecting Standing Balance: A Preliminary Study in IndiaCited by: 11
Author(s): Anirban Dutta, Robins Kumar, Suruchi Malhotra, Sanjay K. Chugh, Alakananda Banerjee, Anirban Dutta
Software Mentions: 1
Published: over 11 years ago
10.1002/ece3.2829
Adaptative evolution of the<i>Vkorc1</i>gene in<i>Mus musculus domesticus</i>is influenced by the selective pressure of anticoagulant rodenticidesCited by: 33
Author(s): Joffrey Goulois, Véronique Lambert, Lionel Legros, Etienne Benoît, Virginie Lattard
Software Mentions: 1
Published: over 7 years ago