Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pcbi.1008757

https://doi.org/10.1371/journal.pcbi.1008757

Using neural networks to mine text and predict metabolic traits for thousands of microbes

Cited by: 4
Author(s): Timothy J. Hackmann, Bo Zhang
Published: almost 4 years ago

Software Mentions 8

bioconductor: ggtree
an R package for visualization of tree and annotation data
Papers that mentioned: 474
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
cran: phytools
Phylogenetic Tools for Comparative Biology (and Other Things)
Papers that mentioned: 586
cran: text
Analyses of Text using Transformers Models from HuggingFace, Natural Language Processing and Machine Learning
Papers that mentioned: 9
pypi: css
a small, fast css parser for python the utilizes the codetalker library
Papers that mentioned: 1
pypi: fit
FIT file I/O
Papers that mentioned: 24
pypi: phytools
Useful tools for physicists.
Papers that mentioned: 586
pypi: text
UNKNOWN
Papers that mentioned: 9