Ecosyste.ms: Papers

10.1186/1748-7188-4-7

Ranking differentially expressed genes from Affymetrix gene expression data: methods with reproducibility, sensitivity, and specificity
Cited by: 71
Author(s): Koji Kadota, Yuji Nakai, Kentaro Shimizu
Software Mentions: 13
Published: over 15 years ago

10.3390/cells9030786

Systematic Identification of Housekeeping Genes Possibly Used as References in Caenorhabditis elegans by Large-Scale Data Integration
Cited by: 13
Author(s): Jingxin Tao, Youjin Hao, Xudong Li, Huachun Yin, Xiner Nie, Jie Zhang, Bo-Ying Xu, Chen Qiao, Bo Li
Software Mentions: 8
Published: over 4 years ago

10.1186/1755-8794-6-2

Next-generation text-mining mediated generation of chemical response-specific gene sets for interpretation of gene expression data
Cited by: 13
Author(s): Kristina Hettne, André Boorsma, Dorien A.M. van Dartel, Jelle J. Goeman, Esther de Jong, Aldert H. Piersma, Rob Stierum, Jos Kleinjans, Jan A. Kors
Software Mentions: 5
Published: almost 12 years ago

10.1371/journal.pone.0058572

Small Hydrophobic Protein of Human Metapneumovirus Does Not Affect Virus Replication and Host Gene Expression In Vitro
Cited by: 19
Author(s): Miranda de Graaf, Sander Herfst, Jamil Aarbiou, Peter C. Burgers, Fatiha Zaaraoui-Boutahar, M Bijl, Wilfred F. J. van IJcken, Eefje J. A. Schrauwen, Albert D. M. E. Osterhaus, Theo M. Luider, Bob J. Scholte, Ron A. M. Fouchier, Arno C. Andeweg
Software Mentions: 5
Published: over 11 years ago

10.1111/jcmm.14748

Development and verification of a nomogram for prediction of recurrence‐free survival in clear cell renal cell carcinoma
Cited by: 6
Author(s): Yuanlei Chen, Shangjun Jiang, Zeyi Lu, Dingwei Xue, Liqun Xia, Jinmei Lu, Huan Wang, Liwei Xu, Liyang Li, Gonghui Li
Software Mentions: 4
Published: almost 5 years ago

10.1186/1471-2105-8-195

Establishing a major cause of discrepancy in the calibration of Affymetrix GeneChips
Cited by: 20
Author(s): Andrew Harrison, Caroline Johnston, Christine A. Orengo
Software Mentions: 3
Published: over 17 years ago

10.1371/journal.pone.0077995

Structural and Enzymatic Characterization of the Phosphotriesterase OPHC2 from Pseudomonas pseudoalcaligenes
Cited by: 52
Author(s): Guillaume Gotthard, Julien Hiblot, Daniel H. González, Mikael Elias, Éric Chabrière
Software Mentions: 3
Published: about 11 years ago

10.1038/srep08372

Crystal structure of VmoLac, a tentative quorum quenching lactonase from the extremophilic crenarchaeon Vulcanisaeta moutnovskia
Cited by: 38
Author(s): Julien Hiblot, Janek Bzdrenga, Charlotte Champion, Éric Chabrière, Mikael Elias
Software Mentions: 2
Published: almost 10 years ago

10.1371/journal.pbio.2003026

Ethoscopes: An open platform for high-throughput ethomics
Cited by: 74
Author(s): Quentin Geissmann, Luis García Rodríguez, Esteban J. Beckwith, Alice S. French, Arian R. Jamasb, Giorgio F. Gilestro
Software Mentions: 2
Published: about 7 years ago

10.3390/diagnostics11060925

Application of the Interaction between Tissue Immunohistochemistry Staining and Clinicopathological Factors for Evaluating the Risk of Oral Cancer Progression by Hierarchical Clustering Analysis: A Case-Control Study in a Taiwanese Population
Cited by: 1
Author(s): Hui‐Ching Wang, Meng-Chun Chou, Chun‐Chieh Wu, Leong‐Perng Chan, Sin-Hua Moi, Mei-Ren Pan, Ta-Chih Liu, Jen‐Yu Hung
Software Mentions: 1
Published: over 3 years ago

10.3389/fgene.2021.643461

Immunohistochemical Expression of Five Protein Combinations Revealed as Prognostic Markers in Asian Oral Cancer
Cited by: 6
Author(s): Hui‐Ching Wang, Chien-Jung Chiang, Ta-Chih Liu, Chun‐Chieh Wu, Yi-Ting Chen, Jan-Gowth Chang, Grace S. Shieh
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0063175

Dynamic Nucleosome Organization at hox Promoters during Zebrafish Embryogenesis
Cited by: 9
Author(s): Steven E. Weicksel, Jia Xu, Charles G. Sagerström
Software Mentions: 1
Published: over 11 years ago

10.1186/1756-0500-7-333

Sac Pox from the thermoacidophilic crenarchaeon Sulfolobus acidocaldarius is a proficient lactonase
Cited by: 22
Author(s): Janek Bzdrenga, Julien Hiblot, Guillaume Gotthard, Charlotte Champion, Mikael Elias, Éric Chabrière
Software Mentions: 1
Published: over 10 years ago