Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: export2graphlan

https://packages.ecosyste.ms/registries/pypi.org/packages/export2graphlan

export2graphlan is a conversion software tool for producing both annotation and tree file for GraPhlAn
1 version
Latest release: over 4 years ago
15 downloads last month

Papers Mentioning export2graphlan 4

10.1128/mSystems.00571-21

Pathogenic <i>Vibrio</i> Species Are Associated with Distinct Environmental Niches and Planktonic Taxa in Southern California (USA) Aquatic Microbiomes
Cited by: 11
Author(s): Rachel E. Diner, Drishti Kaul, Ariel Rabines, Hong Zheng, Joshua A. Steele, John F. Griffith, Andrew E. Allen
Software Mentions: 10
Published: over 3 years ago

10.7717/peerj.1029

Compact graphical representation of phylogenetic data and metadata with GraPhlAn
Cited by: 584
Author(s): Francesco Asnicar, George Weingart, Timothy L. Tickle, Curtis Huttenhower, Nicola Segata
Software Mentions: 6
Published: over 9 years ago

10.12688/f1000research.28608.2

ASaiM-MT: a validated and optimized ASaiM workflow for metatranscriptomics analysis within Galaxy framework
Cited by: 6
Author(s): Subina Mehta, Marie Crane, Emma Leith, Bérénice Batut, Saskia Hiltemann, Magnus Ø. Arntzen, Benoît J. Kunath, Phillip B. Pope, Francesco Delogu, Ray Sajulga, Praveen Kumar, James E. Johnson, Timothy J. Griffin, Pratik Jagtap
Software Mentions: 6
Published: over 3 years ago

10.1128/mSystems.00164-16

Studying Vertical Microbiome Transmission from Mothers to Infants by Strain-Level Metagenomic Profiling
Cited by: 308
Author(s): Francesco Asnicar, Serena Manara, Moreno Zolfo, Duy Tin Truong, Matthias Scholz, Federica Armanini, Pamela Ferretti, Valentina Gorfer, Anna Pedrotti, Adrian Tett, Nicola Segata
Software Mentions: 2
Published: almost 8 years ago