pypi: excel | Projects | Ecosyste.ms: Papers

10.1155/2018/6023457

Genome-Wide Identification, Classification, and Expression Divergence of Glutathione-Transferase Family in<i> Brassica rapa</i> under Multiple Hormone Treatments
Cited by: 18
Author(s): Nadeem Khan, Chunmei Hu, Waleed Amjad Khan, Xilin Hou
Software Mentions: 3
Published: over 7 years ago

10.1186/1471-2105-12-13

A Platform for Processing Expression of Short Time Series (PESTS)
Cited by: 16
Author(s): Ayan Sinha, Marianthi Markatou
Software Mentions: 3
Published: over 14 years ago

10.7554/eLife.43877

Detailed analysis of chick optic fissure closure reveals Netrin-1 as an essential mediator of epithelial fusion
Cited by: 27
Author(s): Holly Hardy, James Prendergast, Aara Patel, Sunit Dutta, Violeta Trejo-Reveles, Hannah Kröger, Andrea R. Yung, Lisa V. Goodrich, Brian P. Brooks, Jane C. Sowden, Joe Rainger
Software Mentions: 3
Published: about 6 years ago

10.1186/s12859-015-0860-1

Treelink: data integration, clustering and visualization of phylogenetic trees
Cited by: 9
Author(s): Christian Allende, Erik Sohn, Cedric Little
Software Mentions: 3
Published: over 9 years ago

10.6026/97320630013269

Potential Hemoglobin A/F role in clinical Malaria
Cited by: 1
Author(s): Vikky Awasthi, Debprasad Chattopadhyay, Jyoti Das
Software Mentions: 3
Published: almost 8 years ago

10.3762/bjnano.8.101

Needs and challenges for assessing the environmental impacts of engineered nanomaterials (ENMs)
Cited by: 34
Author(s): Michelle Romero-Franco, Hilary Godwin, Muhammad Bilal, Yoram Cohen
Software Mentions: 3
Published: about 8 years ago

10.1515/jib-2018-0080

Gene Expression Studies to Identify Significant Genes in AR, MTOR, MAPK Pathways and their Overlapping Regulatory Role in Prostate Cancer
Cited by: 0
Author(s): Nimisha Asati, Abhinav Mishra, Ayush Shukla, Tiratha Raj Singh
Software Mentions: 3
Published: about 6 years ago

10.3897/BDJ.3.e4078

PASSIFOR: A reference library of DNA barcodes for French saproxylic beetles (Insecta, Coleoptera)
Cited by: 19
Author(s): Rodolphe Rougerie, Carlos Lopez‐Vaamonde, Thomas Barnouin, Julien Delnatte, Nicolas Moulin, Thierry Noblecourt, Benoît Nusillard, Guilhem Parmain, Fabien Soldati, Christophe Bouget
Software Mentions: 3
Published: over 10 years ago

10.1186/s13102-021-00318-9

Incidence, severity and perceived susceptibility of COVID-19 in the UK CrossFit population
Cited by: 5
Author(s): Athalie Redwood‐Brown, Grant W. Ralston, Jennifer Wilson
Software Mentions: 3
Published: almost 4 years ago

10.1186/1756-0500-5-52

Meta-analyses and Forest plots using a microsoft excel spreadsheet: step-by-step guide focusing on descriptive data analysis
Cited by: 545
Author(s): Jeruza Lavanholi Neyeloff, Sandra Cristina Pereira Costa Fuchs, Leila Beltrami Moreira
Software Mentions: 3
Published: over 13 years ago

10.1038/s41598-019-50602-5

Next-Generation Sequencing reveals relationship between the larval microbiome and food substrate in the polyphagous Queensland fruit fly
Cited by: 21
Author(s): Rajib Majumder, Brodie Sutcliffe, Phillip W. Taylor, Toni A. Chapman
Software Mentions: 3
Published: almost 6 years ago

10.3390/ijerph18157765

Efficacy of Interventional Programs in Reducing Acculturative Stress and Enhancing Adjustment of International Students to the New Host Educational Environment: A Systematic Review and Meta-Analysis
Cited by: 8
Author(s): Musheer A. Aljaberi, Abdulsamad Alsalahi, Muhamad Hanafiah Juni, Sarah Noman, Ala’a B. Al-Tammemi, Rukman Awang Hamat
Software Mentions: 3
Published: about 4 years ago

10.7554/eLife.19466

Origin and evolution of transporter substrate specificity within the NPF family
Cited by: 78
Author(s): Morten Jørgensen, Deyang Xu, Christoph Crocoll, Heidi A. Ernst, David Ramírez, Mohammed Saddik Motawia, Carl Erik Olsen, Osman Mirza, Hussam Hassan Nour-Eldin
Software Mentions: 3
Published: over 8 years ago

10.7554/eLife.22037

Operon mRNAs are organized into ORF-centric structures that predict translation efficiency
Cited by: 119
Author(s): David H Burkhardt, Silvi Rouskin, Yan Zhang, Gene-Wei Li, Jonathan S. Weissman, Carol A. Gross
Software Mentions: 3
Published: over 8 years ago

10.1155/2018/5206758

Evolution and Expression Divergence of E2 Gene Family under Multiple Abiotic and Phytohormones Stresses in<i>Brassica rapa</i>
Cited by: 8
Author(s): Nadeem Khan, Chunmei Hu, Waleed Amjad Khan, Emal Naseri, Koeun Han, Hansong Dong, Xilin Hou
Software Mentions: 3
Published: almost 7 years ago

10.1038/s41598-017-14623-2

Using a quantitative quadruple immunofluorescent assay to diagnose isolated mitochondrial Complex I deficiency
Cited by: 19
Author(s): Syeda Ahmed, Charlotte L. Alston, Sila Hopton, Langping He, Iain P. Hargreaves, Gavin Falkous, Monika Oláhová, Robert McFarland, Doug M. Turnbull, Mariana C. Rocha, Robert W. Taylor
Software Mentions: 3
Published: over 7 years ago

10.1038/s41598-019-40892-0

Steered molecular dynamic simulations of conformational lock of Cu, Zn-superoxide dismutase
Cited by: 11
Author(s): Bao-Lin Xiao, Yan-Na Ning, Nan-Nan Niu, Di Li, Ali Akbar Moosavi-Movahedi, Nader Sheibani, Jun Hong
Software Mentions: 3
Published: over 6 years ago

10.1186/1471-2164-13-453

Microarray analysis revealing common and distinct functions of promyelocytic leukemia protein (PML) and tumor necrosis factor alpha (TNFα) signaling in endothelial cells
Cited by: 21
Author(s): Xiangguo Cheng, Hung‐Ying Kao
Software Mentions: 3
Published: over 13 years ago

10.1038/s41598-017-10129-z

CD271 determines migratory properties of melanoma cells
Cited by: 31
Author(s): Josefine Radke, Florian Roßner, Torben Redmer
Software Mentions: 3
Published: almost 8 years ago

10.1038/s41598-017-12104-0

Accumulation of minor alleles and risk prediction in schizophrenia
Cited by: 16
Author(s): Huimin Pang, Xianfu Lei, Dejian Yuan, Zuobin Zhu, Shi Huang
Software Mentions: 3
Published: almost 8 years ago

10.1111/joa.12821

Pbx loss in cranial neural crest, unlike in epithelium, results in cleft palate only and a broader midface
Cited by: 19
Author(s): Ian Welsh, James Hart, Joel J. Brown, Karissa Hansen, Marcelo Rocha Marques, Robert Aho, Irina Grishina, Romulo Hurtado, Doris Herzlinger, Elisabetta Ferretti, María J. García-García, Licia Selleri
Software Mentions: 3
Published: about 7 years ago

10.1186/s12885-019-5801-3

A new pragmatic design for dose escalation in phase 1 clinical trials using an adaptive continual reassessment method
Cited by: 20
Author(s): Bernard V. North, Hemant M. Kocher, Peter Sasieni
Software Mentions: 3
Published: about 6 years ago

10.1186/s12882-020-01805-w

The gut microbiota profile of adults with kidney disease and kidney stones: a systematic review of the literature
Cited by: 49
Author(s): Jordan Stanford, Karen E Charlton, Anita Stefoska‐Needham, Rukayat Ibrahim, Kelly Lambert
Software Mentions: 3
Published: about 5 years ago

10.1107/S1600576716010906

Guinier peak analysis for visual and automated inspection of small-angle X-ray scattering data
Cited by: 52
Author(s): Christopher D. Putnam
Software Mentions: 3
Published: almost 9 years ago

10.1080/19490976.2021.1882926

Ethnic variability associating gut and oral microbiome with obesity in children
Cited by: 18
Author(s): Baskar Balakrishnan, Vaithinathan Selvaraju, Jun Chen, Priscilla Ayine, Lu Yang, Jeganathan Ramesh Babu, Thangiah Geetha, Veena Taneja
Software Mentions: 3
Published: over 4 years ago

10.1186/s12961-020-00601-0

Making change last? Exploring the value of sustainability approaches in healthcare: a scoping review
Cited by: 20
Author(s): Laura Lennox, A. Linwood-Amor, Lynne Maher, Julie Reed
Software Mentions: 3
Published: almost 5 years ago

10.1186/s13059-021-02342-x

nPhase: an accurate and contiguous phasing method for polyploids
Cited by: 14
Author(s): Omar Abou Saada, Andreas Tsouris, Chris Eberlein, Anne Friedrich, Joseph Schacherer
Software Mentions: 3
Published: about 4 years ago

10.1002/iid3.246

Flow Plex —A tool for unbiased comprehensive flow cytometry data analysis
Cited by: 0
Author(s): Johannes Nowatzky, Ezra Resnick, Julia Manasson, Cristy Stagnar, Arshed Al-Obeidi, Olivier Manches
Software Mentions: 3
Published: over 6 years ago

10.3389/fpsyg.2019.02007

Primes and Consequences: A Systematic Review of Meritocracy in Intergroup Relations
Cited by: 22
Author(s): Andreia Madeira, Rui Costa-Lopes, John F. Dovidio, Gonçalo Freitas, Mafalda F. Mascarenhas
Software Mentions: 3
Published: almost 6 years ago

10.3390/genes11070760

Protein Coding and Long Noncoding RNA (lncRNA) Transcriptional Landscape in SARS-CoV-2 Infected Bronchial Epithelial Cells Highlight a Role for Interferon and Inflammatory Response
Cited by: 90
Author(s): Radhakrishnan Vishnubalaji, Hibah Shaath, Nehad M. Alajez
Software Mentions: 3
Published: about 5 years ago

10.3389/fnins.2019.01037

Clustering the Brain With “CluB”: A New Toolbox for Quantitative Meta-Analysis of Neuroimaging Data
Cited by: 6
Author(s): Manuela Berlingeri, Francantonio Devoto, Francesca Gasparini, Aurora Saibene, Silvia Corchs, Lucia Clemente, L Danelli, Marcello Gallucci, Riccardo Borgoni, N. Alberto Borghese, Eraldo Paulesu
Software Mentions: 3
Published: almost 6 years ago

10.1186/s12940-017-0265-x

Comparison of methods for calculating the health costs of endocrine disrupters: a case study on triclosan
Cited by: 1
Author(s): Radka Přichystalová, Jean-Baptiste Fini, Leonardo Trasande, Martine Bellanger, Barbara Demeneix, Laura Maxim
Software Mentions: 3
Published: about 8 years ago

10.3389/fphar.2021.657486

Caspase-11-Gasdermin D-Mediated Pyroptosis Is Involved in the Pathogenesis of Atherosclerosis
Cited by: 34
Author(s): Mengqing Jiang, Xuejing Sun, Suzhen Liu, Tao Yan, Yunming Shi, Yuanyuan Bai, Yujie Wang, Qiong Yang, Qize Yang, Weihong Jiang, Hong Yuan, Qixia Jiang, Jingjing Cai
Software Mentions: 3
Published: over 4 years ago

10.3390/genes12071081

Nuclear Organization during Hepatogenesis in Zebrafish Requires Uhrf1
Cited by: 3
Author(s): Bhavani P. Madakashira, Chi Zhang, Filippo Macchi, Elena Magnani, Kirsten C. Sadler
Software Mentions: 3
Published: about 4 years ago

10.1186/s13054-018-1973-5

38th International Symposium on Intensive Care and Emergency Medicine
Cited by: 17
Author(s):
Software Mentions: 3
Published: over 7 years ago

10.1016/j.dib.2020.105736

Dataset for supporting a modular autoinduction device for control of gene expression in Bacillus subtilis
Cited by: 3
Author(s): Graciely Gomes Corrêa, Milca Rachel da Costa Ribeiro Lins, Bruna Fernandes Silva, Gabriela Barbosa de Paiva, Vitória Fernanda Bertolazzi Zocca, Nathan Vinícius Ribeiro, Flávio Pereira Picheli, Matthias Mack, Danielle Biscaro Pedrolli
Software Mentions: 3
Published: almost 5 years ago

10.1038/s41418-018-0101-z

The mitochondrial citrate carrier, SLC25A1, drives stemness and therapy resistance in non-small cell lung cancer
Cited by: 75
Author(s): Harvey R. Fernandez, Shreyas M Gadre, Mingjun Tan, Garrett T. Graham, Rami Mosaoa, Martin S Ongkeko, Kyu Ah Kim, Rebecca B. Riggins, Erika Parasido, Iacopo Petrini, Stefania Pacini, Amrita K. Cheema, Rency S. Varghese, Habtom W. Ressom, Kun Zhang, Christopher Albanese, Aykut Üren, Mikell Paige, Giuseppe Giaccone, Maria Laura Avantaggiati
Software Mentions: 3
Published: over 7 years ago

10.1093/database/baaa103

Creating a Metabolic Syndrome Research Resource using the National Health and Nutrition Examination Survey
Cited by: 2
Author(s): Willysha Jenkins, C Peter Richardson, Ariel Williams, ClarLynda R. Williams-DeVane
Software Mentions: 3
Published: over 5 years ago

10.1186/s12711-021-00664-9

A genome-wide scan to identify signatures of selection in two Iranian indigenous chicken ecotypes
Cited by: 14
Author(s): Elaheh Rostamzadeh Mahdabi, Ali Esmailizadeh, Ahmad Ayatollahi Mehrgardi, Masood Asadi Fozi
Software Mentions: 3
Published: almost 4 years ago

10.7554/eLife.63101

Investigation of Drosophila fruitless neurons that express Dpr/DIP cell adhesion molecules
Cited by: 12
Author(s): Savannah G Brovero, Julia C Fortier, Hongru Hu, Pamela C Lovejoy, Nicole R. Newell, Colleen M Palmateer, Ruei-Ying Tzeng, Pei-Tseng Lee, Kai Zinn, Michelle N. Arbeitman
Software Mentions: 3
Published: over 4 years ago

10.3389/fpls.2020.602313

Rapid and Detailed Characterization of Transgene Insertion Sites in Genetically Modified Plants via Nanopore Sequencing
Cited by: 7
Author(s): Paula Andrea Giraldo, Hiroshi Shinozuka, Germán Spangenberg, K. F. Smith, Noel O. I. Cogan
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0237131

Impact of cardiovascular risk profile on COVID-19 outcome. A meta-analysis
Cited by: 62
Author(s): Jolanda Sabatino, Salvatore De Rosa, Giovanni Di Salvo, Ciro Indolfi
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0228856

Risk factors for obstructed labour in Eastern Uganda: A case control study
Cited by: 16
Author(s): Milton W. Musaba, Grace Ndeezi, Justus K. Barageine, Andrew Weeks, Victoria Nankabirwa, Felix Wamono, Daniel Semakula, James K Tumwine, Julius Wandabwa
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0200003

Inference of cell type content from human brain transcriptomic datasets illuminates the effects of age, manner of death, dissection, and psychiatric diagnosis
Cited by: 56
Author(s): Megan Hastings Hagenauer, Anton Schulmann, Jun Z. Li, Marquis P. Vawter, David Walsh, Robert C. Thompson, Cortney A. Turner, William E. Bunney, R Myers, Jack D. Barchas, Alan F. Schatzberg, Stanley J. Watson, Huda Akil
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0032942

Deep Sequencing Analyses of Low Density Microbial Communities: Working at the Boundary of Accurate Microbiota Detection
Cited by: 152
Author(s): Giske Biesbroek, Elisabeth A. M. Sanders, Guus Roeselers, Xinhui Wang, Martien P. M. Caspers, Krzysztof Trzciński, Debby Bogaert, Bart J. F. Keijser
Software Mentions: 2
Published: over 13 years ago

10.1371/journal.pone.0250019

High-throughput screening of the ReFRAME, Pandemic Box, and COVID Box drug repurposing libraries against SARS-CoV-2 nsp15 endoribonuclease to identify small-molecule inhibitors of viral activity
Cited by: 26
Author(s): Ryan Choi, Mowei Zhou, Roger Shek, Jesse Wilson, Logan Tillery, Jonathan M. Craig, Indraneel Salukhe, Sarah E. Hickson, Neeraj Kumar, Rhema M. James, Garry W. Buchko, Ruilian Wu, Sydney Huff, Tu-Trinh Nguyen, Brett L. Hurst, Sara Cherry, Lynn K. Barrett, Jennifer Hyde, Wesley C. Van Voorhis
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0222535

False-negative errors in next-generation sequencing contribute substantially to inconsistency of mutation databases
Cited by: 9
Author(s): Young Ho Kim, Yura Song, Jong Kwang Kim, Tae Min Kim, Hye Won Sim, Hyung Lae Kim, Hyonchol Jang, Young Woo Kim, Kyung Taek Hong
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0243192

Development of a fasting blood glucose-based strategy to diagnose women with gestational diabetes mellitus at increased risk of adverse outcomes in a COVID-19 environment
Cited by: 10
Author(s): Michael C d’Emden, Donald S A McLeod, Jacobus Ungerer, Charles A Appleton, David Kanowski
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0231694

The determinants of handwashing behaviour among internally displaced women in two camps in the Kurdistan Region of Iraq
Cited by: 12
Author(s): Aso Zangana, Nazar P. Shabila, Tom Heath, Sian White
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0238750

Corneal dysfunction precedes the onset of hyperglycemia in a mouse model of diet-induced obesity
Cited by: 15
Author(s): Aubrey Hargrave, Justin Courson, Vanna Pham, Paul Landry, Sri Magadi, Pooja Shankar, Sam Hanlon, Apoorva Das, Rolando E. Rumbaut, C. Wayne Smith, Alan R. Burns
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0243839

Gamma distribution model of diffusion MRI for the differentiation of primary central nerve system lymphomas and glioblastomas
Cited by: 2
Author(s): Osamu Togao, Toru Chikui, Kenji Tokumori, Yukiko Kami, Kazufumi Kikuchi, Daichi Momosaka, Yoshitomo Kikuchi, Daisuke Kuga, Nobuhiro Hata, Masahiro Mizoguchi, Koji Iihara, Akio Hiwatashi
Software Mentions: 2
Published: over 4 years ago

10.1186/s12864-021-07685-0

Insights into the genome architecture and evolution of Shiga toxin encoding bacteriophages of Escherichia coli
Cited by: 11
Author(s): Graça Pinto, Marta Sampaio, Óscar Dias, Carina Almeida, Joana Azeredo, Hugo Oliveira
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pone.0207988

Metabarcoding targeting the EF1 alpha region to assess Fusarium diversity on cereals
Cited by: 23
Author(s): Anne-Laure Boutigny, Angélique Gautier, Ryan Basler, Florian Dauthieux, Stephen Leite, Romain Valade, Jaime Aguayo, Renaud Ioos, Valérie Laval
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0241928

Peripheral blood levels of brain-derived neurotrophic factor in patients with post-traumatic stress disorder (PTSD): A systematic review and meta-analysis
Cited by: 32
Author(s): Helia Mojtabavi, Amene Saghazadeh, Leigh van den Heuvel, Joana Bücker, Nima Rezaei
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0243718

Prevalence and correlates of prescription drug diversion and misuse among people living with HIV in the eThekwini district, KwaZulu-Natal, South Africa
Cited by: 4
Author(s): Buyisile Chibi, Nonhlanhla Yende‐Zuma, Tivani P. Mashamba-Thompson
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0250685

Efficacy and safety of Chinese herbal footbaths for the treatment of dysmenorrhea: Protocol for a systematic review and meta-analysis
Cited by: 2
Author(s): Min Xiao, Lizhou Liu, Steve Tumilty, Dan Liu, Yi-Zhuang You, Yunhui Chen, Suo-Qin Tang, Wei Huang, G. David Baxter
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pone.0248331

Comorbid anxiety and depression: Prevalence and associated factors among pregnant women in Arba Minch zuria district, Gamo zone, southern Ethiopia
Cited by: 18
Author(s): Agegnehu Bante, Abera Mersha, Zerihun Zerdo, Biresaw Wassihun, Tomas Yeheyis
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0251870

New relative sea-level (RSL) indications from the Eastern Mediterranean: Middle Bronze Age to the Roman period (~3800–1800 y BP) archaeological constructions at Dor, the Carmel coast, Israel
Cited by: 9
Author(s): Assaf Yasur‐Landau, Gilad Shtienberg, Gil Gambash, Giorgio Spada, Daniele Melini, Ehud Arkin Shalev, Anthony Tamberino, Jack Reese, Thomas E. Levy, Dorit Sivan
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pone.0225384

An examination of the association between early initiation of substance use and interrelated multilevel risk and protective factors among adolescents
Cited by: 19
Author(s): Carlos A. Trujillo, Diana Obando, Ángela Trujillo
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0104642

Leisure in Children and Adolescents with Juvenile Idiopathic Arthritis: A Systematic Review
Cited by: 22
Author(s): Sabrina Cavallo, Karine Toupin April, Viviane Grandpierre, Annette Majnemer, Debbie Ehrmann Feldman
Software Mentions: 2
Published: almost 11 years ago

10.1186/s12863-020-00915-6

Optimal reference genes for gene expression analysis in polyploid of Cyprinus carpio and Carassius auratus
Cited by: 4
Author(s): Wenbin Liu, Xiudan Yuan, Shu-li Yuan, Liuye Dai, Shenghua Dong, Jinhui Liu, Liangyue Peng, Minmeng Wang, Yi Tang, Yamei Xiao
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0236524

Patient perspectives on interpersonal aspects of healthcare and patient-centeredness at primary health facilities: A mixed methods study in rural Eastern Uganda
Cited by: 5
Author(s): Evelyn Waweru, Tom Smekens, Joanna Orne-Gliemann, Freddie Ssengooba, Jacqueline E W Broerse, Bart Criel
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0235269

Efficacy of an ultrasound training program for nurse midwives to assess high-risk conditions at labor triage in rural Uganda
Cited by: 17
Author(s): Sachita Shah, Nicole Santos, Rose Kisa, Odida Mike Maxwell, Jude Mulowooza, Dilys Walker, Krithika M. Muruganandan
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0027992

Accurate Genome Relative Abundance Estimation Based on Shotgun Metagenomic Reads
Cited by: 103
Author(s): Li Charlie Xia, Jacob A. Cram, Ting Chen, Jed A. Fuhrman, Fengzhu Sun
Software Mentions: 2
Published: over 13 years ago

10.1371/journal.pone.0248742

The effectiveness of public health interventions against COVID-19: Lessons from the Singapore experience
Cited by: 21
Author(s): John P. Ansah, David B. Matchar, Shao Wei Lam, Jenny Guek Hong Low, Ahmad Reza Pourghaderi, Fahad Javaid Siddiqui, Tessa Lui Shi Min, Wei-Yan Aloysius Chia, Marcus Eng Hock Ong
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0082444

The Development of a Novel High Throughput Computational Tool for Studying Individual and Collective Cellular Migration
Cited by: 11
Author(s): Douglas A. Chapnick, Jeremy Jacobsen, Xuedong Liu
Software Mentions: 2
Published: over 11 years ago

10.1371/journal.pone.0242523

Maternal exposure to sulfonamides and adverse pregnancy outcomes: A systematic review and meta-analysis
Cited by: 5
Author(s): Peixuan Li, Xu‐Jie Qin, Fangbiao Tao, Kun Huang
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0230532

Evaluation of continuous quality improvement of tuberculosis and HIV diagnostic services in Amhara Public Health Institute, Ethiopia
Cited by: 3
Author(s): Melashu Balew Shiferaw, Abay Sisay Misganaw
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0250633

Trends and predictors of in-hospital mortality among babies with hypoxic ischaemic encephalopathy at a tertiary hospital in Nigeria: A retrospective cohort study
Cited by: 5
Author(s): Beatrice Nkolika Ezenwa, Gbenga Olorunfemi, Iretiola Fajolu, Toyin Adeniyi, Khadijah Oleolo-Ayodeji, Blessing Kene-Udemezue, Joseph Ayodeji Olamijulo, Chinyere Ezeaka
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0145112

GTPase Activating Protein (Sh3 Domain) Binding Protein 1 Regulates the Processing of MicroRNA-1 during Cardiac Hypertrophy
Cited by: 24
Author(s): Minzhen He, Zhi Yang, Maha Abdellatif, Danish Sayed
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0201507

Head-to-head comparison of three experimental methods of quantifying competitive fitness in C. elegans
Cited by: 5
Author(s): Timothy A. Crombie, Sayran Saber, Ayush Shekhar Saxena, Robyn Egan, Charles F. Baer
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0245163

The use of complementary and alternative medicine among hypertensive and type 2 diabetic patients in Western Jamaica: A mixed methods study
Cited by: 17
Author(s): Omolade Adeniyi, LaTimberly Washington, Christina J. Glenn, Sarah Franklin, Anniecia Scott, Maung Aung, Soumya J. Niranjan, Pauline E. Jolly
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0249885

Prediction of early recurrence of pancreatic ductal adenocarcinoma after resection
Cited by: 8
Author(s): Toshitaka Sugawara, Daisuke Ban, Junichi Nishino, Shuichi Watanabe, Akio Maekawa, Yoshiya Ishikawa, Keiichi Akahoshi, Kosuke Ogawa, Hiroaki Ono, Akira Kudo, Shinji Tanaka, Minoru Tanabe
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0244055

Knowledge, practices and seroprevalence of Taenia species in smallholder farms in Gauteng, South Africa
Cited by: 7
Author(s): Nothando Altrecia Shongwe, Charles Byaruhanga, Pierre Dorny, Véronique Dermauw, Daniel Nenene Qekwana
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0172687

Single nucleotide polymorphism discovery in bovine liver using RNA-seq technology
Cited by: 10
Author(s): Chandra Shekhar Pareek, Paweł Błaszczyk, Piotr Dziuba, Urszula Czarnik, Leyland Fraser, Przemysław Sobiech, M. Pierzchała, Yaping Feng, Haja N. Kadarmideen, Dibyendu Kumar
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0168585

The Effect of Random Error on Diagnostic Accuracy Illustrated with the Anthropometric Diagnosis of Malnutrition
Cited by: 31
Author(s): Emmanuel Grellety, Michael Golden
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0237668

Socioeconomic effects of water hyacinth (Echhornia Crassipes) in Lake Tana, North Western Ethiopia
Cited by: 19
Author(s): Belachew Getnet Enyew, Workiyie Worie Assefa, Ayenew Gezie
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0170339

MEDICI: Mining Essentiality Data to Identify Critical Interactions for Cancer Drug Target Discovery and Development
Cited by: 4
Author(s): Sahar Harati, Lee Cooper, Josue D. Moran, Felipe Giuste, Yuhong Du, Andrey A. Ivanov, Margaret A. Johns, Fadlo R. Khuri, Haian Fu, Carlos S. Moreno
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0231889

Gestational weight gain and its effect on birth outcomes in sub-Saharan Africa: Systematic review and meta-analysis
Cited by: 21
Author(s): Fekede Asefa, Allison Cummins, Yadeta Dessie, Andrew Hayen, Maralyn Foureur
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0244519

Nobody ever questions—Polypharmacy in care homes: A mixed methods evaluation of a multidisciplinary medicines optimisation initiative
Cited by: 4
Author(s): Sue Jordan, Hayley Prout, Neil Carter, John Dicomidis, Joanne Hayes, Jeff Round, Andrew Carson‐Stevens
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0242204

Real-time drone derived thermal imagery outperforms traditional survey methods for an arboreal forest mammal
Cited by: 15
Author(s): Ryan R. Witt, Chad T. Beranek, Lachlan G. Howell, Shelby A. Ryan, John Clulow, Neil R. Jordan, Bob Denholm, Adam Roff
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0085726

Oscillatory Behavior of Neutrophils under Opposing Chemoattractant Gradients Supports a Winner-Take-All Mechanism
Cited by: 26
Author(s): Matthew B. Byrne, Yuki Kimura, Ashish Kapoor, Yuan He, Kewin S. Mattam, Katherine M. Hasan, Luke N. Olson, Fei Wang, Paul J. A. Kenis, Christopher V. Rao
Software Mentions: 2
Published: over 11 years ago

10.1371/journal.pgen.1005117

Asymmetric Transcript Discovery by RNA-seq in C. elegans Blastomeres Identifies neg-1, a Gene Important for Anterior Morphogenesis
Cited by: 20
Author(s): Erin Osborne Nishimura, Jay C. Zhang, Adam D. Werts, Bob Goldstein, Jason D. Lieb
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pgen.1006942

A ‘synthetic-sickness’ screen for senescence re-engagement targets in mutant cancer backgrounds
Cited by: 9
Author(s): Claire J. Cairney, Lauren S. Godwin, Alan Bilsland, Sharon Burns, Katrina H. Stevenson, Lynn McGarry, John Revie, Jon D. Moore, Ceri M. Wiggins, R S Collinson, Clare Mudd, Elpida Tsonou, Mahito Sadaie, Dorothy C. Bennett, Masashi Narita, C Torrance, W. Nicol Keith
Software Mentions: 2
Published: almost 8 years ago

10.1371/journal.pgen.1003938

Co-evolution of Human Leukocyte Antigen (HLA) Class I Ligands with Killer-Cell Immunoglobulin-Like Receptors (KIR) in a Genetically Diverse Population of Sub-Saharan Africans
Cited by: 111
Author(s): Paul J. Norman, Jill A. Hollenbach, Neda Nemat-Gorgani, Lisbeth A. Guethlein, Hugo G. Hilton, Marcelo J. Pando, Kwadwo A. Koram, Eleanor M. Riley, Laurent Abi-Rached, Peter Parham
Software Mentions: 2
Published: over 11 years ago

10.1371/journal.pgen.1005059

Genome-Wide Association Studies in Dogs and Humans Identify ADAMTS20 as a Risk Variant for Cleft Lip and Palate
Cited by: 80
Author(s): Zena Wolf, Harrison Brand, John R. Shaffer, Elizabeth J. Leslie, Boaz Arzi, Cali E. Willet, Timothy C. Cox, Toby McHenry, Narayan Nicole, Eleanor Feingold, Wang Xioajing, Sliskovic Saundra, Nili Karmi, Noa Safra, Carla Sanchez, Frederic W.‐B. Deleyiannis, Jeffrey C. Murray, Claire M. Wade, Mary L. Marazita, Danika L. Bannasch
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pgen.1008610

IgaA negatively regulates the Rcs Phosphorelay via contact with the RcsD Phosphotransfer Protein
Cited by: 25
Author(s): Erin A. Wall, Nadim Majdalani, Susan Gottesman
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pmed.1003146

Detection rate and treatment gap for atrial fibrillation identified through screening in community health centers in China (AF-CATCH): A prospective multicenter study
Cited by: 23
Author(s): Yi Chen, Qi‐Fang Huang, Chang‐Sheng Sheng, Wei Zhang, Shuai Shao, Dian Wang, Yi‐Bang Cheng, Ying Wang, Qian‐Hui Guo, Dongyan Zhang, Yan Li, Nicole Lowres, Ben Freedman, Ji‐Guang Wang
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pgen.1009469

Extracellular spreading of Wingless is required for Drosophila oogenesis
Cited by: 5
Author(s): Xiaoxi Wang, Kimberly S. LaFever, Indrayani Waghmare, Andrea Page-McCaw
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0245076

Safety and efficacy study: Short-term application of radiofrequency ablation and stereotactic body radiotherapy for Barcelona Clinical Liver Cancer stage 0–B1 hepatocellular carcinoma
Cited by: 1
Author(s): Feiqian Wang, Kazushi Numata, Atsuya Takeda, Katsuaki Ogushi, Hiroyuki Fukuda, Koji Hara, Makoto Chuma, Takahisa Eriguchi, Yuichirou Tsurugai, Shin Maeda
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0034052

Mycobacteriophage Endolysins: Diverse and Modular Enzymes with Multiple Catalytic Activities
Cited by: 105
Author(s): Kimberly M. Payne, Graham F. Hatfull
Software Mentions: 2
Published: over 13 years ago

10.1186/1471-2164-13-62

Transcriptomic and proteomic analyses of the Aspergillus fumigatus hypoxia response using an oxygen-controlled fermenter
Cited by: 108
Author(s): Bridget M. Barker, Kristin Kroll, Martin Vödisch, Aurélien Mazurie, Olaf Kniemeyer, Robert A. Cramer
Software Mentions: 2
Published: over 13 years ago

10.1186/s12864-019-6296-7

Population history and genetic adaptation of the Fulani nomads: inferences from genome-wide data and the lactase persistence trait
Cited by: 33
Author(s): Mário Vicente, Edita Priehodová, Issa Diallo, Eliška Podgorná, Estella S. Poloni, Viktor Černý, Carina M. Schlebusch
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0244589

Usefulness of serial post-systolic shortening by speckle tracking echocardiography to predict major adverse cardiovascular events and segmental function improvement after acute myocardial infarction
Cited by: 3
Author(s): Ju-Feng Hsiao, Kuo‐Li Pan, Chi‐Ming Chu, Shih-Tai Chang, Chang-Min Chung, Jen-Te Hsu
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0209778

Field evaluation of near point of care Cepheid GeneXpert HIV-1 Qual for early infant diagnosis
Cited by: 19
Author(s): Valarie Opollo, Alliance Nikuze, Jihane Ben‐Farhat, Emily Anyango, Felix Humwa, Boaz Oyaro, Stephen Wanjala, Willis Omwoyo, Maxwel Majiwa, Victor Akelo, Clement Zeh, David Maman
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0234262

The function of a heterozygous p53 mutation in a Li-Fraumeni syndrome patient
Cited by: 1
Author(s): Yang Li, Ting Li, Yuejia Tang, Zhiyan Zhan, Lixia Ding, Lili Song, Tingting Yu, Yi Yang, Jing Ma, Yingwen Zhang, Ying Zhou, Song Gu, Min Xu, Yijin Gao, Yanxin Li
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0253558

Prevalence and associated factors of respiratory allergies in the Kingdom of Saudi Arabia: A cross-sectional investigation, September–December 2020
Cited by: 8
Author(s): Ahmad Almatroudi, Ayman Mousa, Divya Vinnakota, Adil Abalkhail, Ameen S. S. Alwashmi, Saleh A. Almatroodi, Fahad A. Alhumaydhi, Russell Kabir, Ilias Mahmud
Software Mentions: 2
Published: about 4 years ago

10.1186/1471-2164-12-141

Gene expression analyses of immune responses in Atlantic salmon during early stages of infection by salmon louse (Lepeophtheirus salmonis) revealed bi-phasic responses coinciding with the copepod-chalimus transition
Cited by: 138
Author(s): Tariku Markos Tadiso, Aleksei Krasnov, Stanko Škugor, Sergey Afanasyev, Ivar Hordvik, Frank Nilsen
Software Mentions: 2
Published: over 14 years ago

10.1371/journal.pgen.1004734

Metabolic Respiration Induces AMPK- and Ire1p-Dependent Activation of the p38-Type HOG MAPK Pathway
Cited by: 39
Author(s): Hema Adhikari, Paul J. Cullen
Software Mentions: 2
Published: over 10 years ago

10.1186/ar2541

Mapping similarities in mTOR pathway perturbations in mouse lupus nephritis models and human lupus nephritis
Cited by: 37
Author(s): Padmalatha S. Reddy, Holly Legault, Joseph P. Sypek, Mark J Collins, Elizabeth Goad, Samuel J. Goldman, Wei Liu, Stuart Murray, Andrew J. Dorner, Margot O’Toole
Software Mentions: 2
Published: over 17 years ago

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