pypi: excel | Projects | Ecosyste.ms: Papers

10.7554/eLife.64691

Disease-related mutations in PI3Kγ disrupt regulatory C-terminal dynamics and reveal a path to selective inhibitors
Cited by: 23
Author(s): Manoj Kumar Rathinaswamy, Zied Gaieb, Kaelin D Fleming, Chiara Borsari, Noah J Harris, Brandon E Moeller, Matthias P. Wymann, Rommie E. Amaro, John E. Burke
Software Mentions: 3
Published: over 5 years ago

10.1186/1471-2105-12-13

A Platform for Processing Expression of Short Time Series (PESTS)
Cited by: 16
Author(s): Ayan Sinha, Marianthi Markatou
Software Mentions: 3
Published: over 15 years ago

10.7554/eLife.17243

Human intracranial recordings link suppressed transients rather than 'filling-in' to perceptual continuity across blinks
Cited by: 40
Author(s): Tal Golan, Ido Davidesco, Meir Meshulam, David M. Groppe, Pierre Mégevand, Erin Yeagle, Matthew S Goldfinger, Michal Harel, Lucía Melloni, Charles E. Schroeder, Leon Y. Deouell, Ashesh D. Mehta, Rafael Malach
Software Mentions: 3
Published: almost 10 years ago

10.7554/eLife.63101

Investigation of Drosophila fruitless neurons that express Dpr/DIP cell adhesion molecules
Cited by: 12
Author(s): Savannah G Brovero, Julia C Fortier, Hongru Hu, Pamela C Lovejoy, Nicole R. Newell, Colleen M Palmateer, Ruei-Ying Tzeng, Pei-Tseng Lee, Kai Zinn, Michelle N. Arbeitman
Software Mentions: 3
Published: over 5 years ago

10.7554/eLife.19466

Origin and evolution of transporter substrate specificity within the NPF family
Cited by: 78
Author(s): Morten Jørgensen, Deyang Xu, Christoph Crocoll, Heidi A. Ernst, David Ramírez, Mohammed Saddik Motawia, Carl Erik Olsen, Osman Mirza, Hussam Hassan Nour-Eldin
Software Mentions: 3
Published: over 9 years ago

10.3762/bjnano.8.101

Needs and challenges for assessing the environmental impacts of engineered nanomaterials (ENMs)
Cited by: 34
Author(s): Michelle Romero-Franco, Hilary Godwin, Muhammad Bilal, Yoram Cohen
Software Mentions: 3
Published: over 9 years ago

10.3897/BDJ.3.e4078

PASSIFOR: A reference library of DNA barcodes for French saproxylic beetles (Insecta, Coleoptera)
Cited by: 19
Author(s): Rodolphe Rougerie, Carlos Lopez‐Vaamonde, Thomas Barnouin, Julien Delnatte, Nicolas Moulin, Thierry Noblecourt, Benoît Nusillard, Guilhem Parmain, Fabien Soldati, Christophe Bouget
Software Mentions: 3
Published: over 11 years ago

10.1186/s13102-021-00318-9

Incidence, severity and perceived susceptibility of COVID-19 in the UK CrossFit population
Cited by: 5
Author(s): Athalie Redwood‐Brown, Grant W. Ralston, Jennifer Wilson
Software Mentions: 3
Published: almost 5 years ago

10.1515/jib-2018-0080

Gene Expression Studies to Identify Significant Genes in AR, MTOR, MAPK Pathways and their Overlapping Regulatory Role in Prostate Cancer
Cited by: 0
Author(s): Nimisha Asati, Abhinav Mishra, Ayush Shukla, Tiratha Raj Singh
Software Mentions: 3
Published: over 7 years ago

10.3390/biom11081133

TCMacro: A Simple and Robust ImageJ-Based Method for Automated Measurement of Tail Coiling Activity in Zebrafish
Cited by: 2
Author(s): Kevin Adi Kurnia, Fiorency Santoso, Bonifasius Putera Sampurna, Gilbert Audira, Jong-Chin Huang, Kelvin H.‐C. Chen, Chung-Der Hsiao
Software Mentions: 3
Published: about 5 years ago

10.1186/1756-0500-5-52

Meta-analyses and Forest plots using a microsoft excel spreadsheet: step-by-step guide focusing on descriptive data analysis
Cited by: 545
Author(s): Jeruza Lavanholi Neyeloff, Sandra Cristina Pereira Costa Fuchs, Leila Beltrami Moreira
Software Mentions: 3
Published: over 14 years ago

10.1038/srep41328

PrimerSuite: A High-Throughput Web-Based Primer Design Program for Multiplex Bisulfite PCR
Cited by: 32
Author(s): Jennifer Lu, Andrew D. Johnston, Philippe Berichon, Kelin Ru, Darren Korbie, Matt Trau
Software Mentions: 3
Published: over 9 years ago

10.1038/srep34315

Unravelling molecular mechanisms from floral initiation to lipid biosynthesis in a promising biofuel tree species, Pongamia pinnata using transcriptome analysis
Cited by: 21
Author(s): Rachapudi Venkata Sreeharsha, Shalini Mudalkar, Kambam Tamna Singha, A. Ramachandra Reddy
Software Mentions: 3
Published: almost 10 years ago

10.1186/s12870-021-02919-5

Superoxide dismutase (SOD) as a selection criterion for triticale grain yield under drought stress: a comprehensive study on genomics and expression profiling, bioinformatics, heritability, and phenotypic variability
Cited by: 39
Author(s): Armin Saed-Moucheshi, Fatemeh Sohrabi, Elham Fasihfar, Fatemeh Baniasadi, Mehrnaz Riasat, Ali-Akbar Mozafari
Software Mentions: 3
Published: over 5 years ago

10.6026/97320630013269

Potential Hemoglobin A/F role in clinical Malaria
Cited by: 1
Author(s): Vikky Awasthi, Debprasad Chattopadhyay, Jyoti Das
Software Mentions: 3
Published: about 9 years ago

10.1186/1471-2164-13-453

Microarray analysis revealing common and distinct functions of promyelocytic leukemia protein (PML) and tumor necrosis factor alpha (TNFα) signaling in endothelial cells
Cited by: 21
Author(s): Xiangguo Cheng, Hung‐Ying Kao
Software Mentions: 3
Published: over 14 years ago

10.1038/srep20795

Effects of TRP channel agonist ingestion on metabolism and autonomic nervous system in a randomized clinical trial of healthy subjects
Cited by: 28
Author(s): Stéphanie Michlig, Jenny Meylan Merlini, Maurice Beaumont, Mirko Ledda, Aude Tavenard, Rajat Mukherjee, Susana Camacho, Johannes le Coutre
Software Mentions: 3
Published: over 10 years ago

10.1155/2018/6023457

Genome-Wide Identification, Classification, and Expression Divergence of Glutathione-Transferase Family in<i> Brassica rapa</i> under Multiple Hormone Treatments
Cited by: 18
Author(s): Nadeem Khan, Chunmei Hu, Waleed Amjad Khan, Xilin Hou
Software Mentions: 3
Published: over 8 years ago

10.3390/biology9090260

Computational and Transcriptome Analyses Revealed Preferential Induction of Chemotaxis and Lipid Synthesis by SARS-CoV-2
Cited by: 7
Author(s): Hibah Shaath, Nehad M. Alajez
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.ppat.1008803

Closely related reovirus lab strains induce opposite expression of RIG-I/IFN-dependent versus -independent host genes, via mechanisms of slow replication versus polymorphisms in dsRNA binding σ3 respectively
Cited by: 17
Author(s): Adil Mohamed, Prathyusha Konda, Heather E. Eaton, Shashi Gujar, James R. Smiley, Maya Shmulevitz
Software Mentions: 3
Published: almost 6 years ago

10.1186/s12882-020-01805-w

The gut microbiota profile of adults with kidney disease and kidney stones: a systematic review of the literature
Cited by: 49
Author(s): Jordan Stanford, Karen E Charlton, Anita Stefoska‐Needham, Rukayat Ibrahim, Kelly Lambert
Software Mentions: 3
Published: about 6 years ago

10.1186/s13059-021-02342-x

nPhase: an accurate and contiguous phasing method for polyploids
Cited by: 14
Author(s): Omar Abou Saada, Andreas Tsouris, Chris Eberlein, Anne Friedrich, Joseph Schacherer
Software Mentions: 3
Published: over 5 years ago

10.1155/2018/5206758

Evolution and Expression Divergence of E2 Gene Family under Multiple Abiotic and Phytohormones Stresses in<i>Brassica rapa</i>
Cited by: 8
Author(s): Nadeem Khan, Chunmei Hu, Waleed Amjad Khan, Emal Naseri, Koeun Han, Hansong Dong, Xilin Hou
Software Mentions: 3
Published: about 8 years ago

10.1186/s13002-021-00432-5

What interferes with conducting free lists? A comparative ethnobotanical experiment
Cited by: 4
Author(s): Melise Pessôa Araujo Meireles, Ulysses Paulino Albuquerque, Patrícia Muniz de Medeiros
Software Mentions: 3
Published: over 5 years ago

10.1186/s40900-021-00305-x

The use of digital storytelling of patients’ stories as an approach to translating knowledge: a scoping review
Cited by: 15
Author(s): Elly Park, Mary Forhan, Allyson Jones
Software Mentions: 3
Published: about 5 years ago

10.1155/2018/5912194

Pyroptosis of MCF7 Cells Induced by the Secreted Factors of hUCMSCs
Cited by: 16
Author(s): Yang Jiao, Hang Zhao, Guodong Chen, Xiongbo Sang, Luhan Yang, Zhen Hou, Wei Si, Bingrong Zheng
Software Mentions: 3
Published: almost 8 years ago

10.3389/fpls.2018.00717

An Immortalized Genetic Mapping Population for Perennial Ryegrass: A Resource for Phenotyping and Complex Trait Mapping
Cited by: 4
Author(s): Janaki Velmurugan, Dan Milbourne, V. Connolly, J. Heslop‐Harrison, Ulrike C. M. Anhalt, M.B. Lynch, Susanne Barth
Software Mentions: 3
Published: over 8 years ago

10.3389/fphar.2021.657486

Caspase-11-Gasdermin D-Mediated Pyroptosis Is Involved in the Pathogenesis of Atherosclerosis
Cited by: 34
Author(s): Mengqing Jiang, Xuejing Sun, Suzhen Liu, Tao Yan, Yunming Shi, Yuanyuan Bai, Yujie Wang, Qiong Yang, Qize Yang, Weihong Jiang, Hong Yuan, Qixia Jiang, Jingjing Cai
Software Mentions: 3
Published: over 5 years ago

10.3389/fpsyg.2019.02007

Primes and Consequences: A Systematic Review of Meritocracy in Intergroup Relations
Cited by: 22
Author(s): Andreia Madeira, Rui Costa-Lopes, John F. Dovidio, Gonçalo Freitas, Mafalda F. Mascarenhas
Software Mentions: 3
Published: almost 7 years ago

10.1186/s12885-019-5801-3

A new pragmatic design for dose escalation in phase 1 clinical trials using an adaptive continual reassessment method
Cited by: 20
Author(s): Bernard V. North, Hemant M. Kocher, Peter Sasieni
Software Mentions: 3
Published: about 7 years ago

10.1186/s13072-019-0276-7

Ovarian dysfunction following prenatal exposure to an insecticide, chlordecone, associates with altered epigenetic features
Cited by: 16
Author(s): Louis Legoff, Ouzna Dali, Shereen Cynthia D’Cruz, Antonio Suglia, Aurore Gély-Pernot, Chloé Hémery, Pierre-Yves Kernanec, Abbassia Demmouche, Christine Kervarrec, Sergei G. Tevosian, Luc Multigner, Fátima Smagulova
Software Mentions: 3
Published: over 7 years ago

10.15252/embr.201948375

Class I <scp>HDAC</scp> inhibitors enhance <scp>YB</scp> ‐1 acetylation and oxidative stress to block sarcoma metastasis
Cited by: 63
Author(s): Amal M. El-Naggar, Syam Prakash Somasekharan, Yemin Wang, Hongwei Cheng, Gian Luca Negri, Melvin Pan, Xue Q. Wang, Alberto Delaidelli, Bo Rafn, Jordan Cran, Fan Zhang, Haifeng Zhang, Shane Colborne, Martin Gleave, Anna Mandinova, Nancy Kedersha, Christopher S. Hughes, Didier Surdez, Olivier Delattre, Yuzhuo Wang, David G. Huntsman, Gregg B. Morin, Poul H. Sorensen
Software Mentions: 3
Published: almost 7 years ago

10.3389/fnins.2019.01037

Clustering the Brain With “CluB”: A New Toolbox for Quantitative Meta-Analysis of Neuroimaging Data
Cited by: 6
Author(s): Manuela Berlingeri, Francantonio Devoto, Francesca Gasparini, Aurora Saibene, Silvia Corchs, Lucia Clemente, L Danelli, Marcello Gallucci, Riccardo Borgoni, N. Alberto Borghese, Eraldo Paulesu
Software Mentions: 3
Published: almost 7 years ago

10.3390/genes11070760

Protein Coding and Long Noncoding RNA (lncRNA) Transcriptional Landscape in SARS-CoV-2 Infected Bronchial Epithelial Cells Highlight a Role for Interferon and Inflammatory Response
Cited by: 90
Author(s): Radhakrishnan Vishnubalaji, Hibah Shaath, Nehad M. Alajez
Software Mentions: 3
Published: about 6 years ago

10.1186/s13054-018-1973-5

38th International Symposium on Intensive Care and Emergency Medicine
Cited by: 17
Author(s):
Software Mentions: 3
Published: over 8 years ago

10.1186/s12865-019-0294-z

Immunoglobulin G responses against falciparum malaria specific antigens are higher in children with homozygous sickle cell trait than those with normal hemoglobin
Cited by: 4
Author(s): George M. Bwire, Mtebe Majigo, Robert Makalla, Lillian Nkinda, Akili Mawazo, Mucho Mizinduko, Julie Makani
Software Mentions: 3
Published: over 7 years ago

10.1186/s12913-020-05929-5

Change and improvement 50 years in the making: a scoping review of the use of soft systems methodology in healthcare
Cited by: 9
Author(s): Hanna Augustsson, Kate Churruca, Jeffrey Braithwaite
Software Mentions: 3
Published: almost 6 years ago

10.1038/s41418-018-0101-z

The mitochondrial citrate carrier, SLC25A1, drives stemness and therapy resistance in non-small cell lung cancer
Cited by: 75
Author(s): Harvey R. Fernandez, Shreyas M Gadre, Mingjun Tan, Garrett T. Graham, Rami Mosaoa, Martin S Ongkeko, Kyu Ah Kim, Rebecca B. Riggins, Erika Parasido, Iacopo Petrini, Stefania Pacini, Amrita K. Cheema, Rency S. Varghese, Habtom W. Ressom, Kun Zhang, Christopher Albanese, Aykut Üren, Mikell Paige, Giuseppe Giaccone, Maria Laura Avantaggiati
Software Mentions: 3
Published: over 8 years ago

10.1016/j.dib.2020.105736

Dataset for supporting a modular autoinduction device for control of gene expression in Bacillus subtilis
Cited by: 3
Author(s): Graciely Gomes Corrêa, Milca Rachel da Costa Ribeiro Lins, Bruna Fernandes Silva, Gabriela Barbosa de Paiva, Vitória Fernanda Bertolazzi Zocca, Nathan Vinícius Ribeiro, Flávio Pereira Picheli, Matthias Mack, Danielle Biscaro Pedrolli
Software Mentions: 3
Published: about 6 years ago

10.3390/genes12071081

Nuclear Organization during Hepatogenesis in Zebrafish Requires Uhrf1
Cited by: 3
Author(s): Bhavani P. Madakashira, Chi Zhang, Filippo Macchi, Elena Magnani, Kirsten C. Sadler
Software Mentions: 3
Published: about 5 years ago

10.3390/ijms21113746

Differential Secretome Profiling of Human Osteoarthritic Synoviocytes Treated with Biotechnological Unsulfated and Marine Sulfated Chondroitins
Cited by: 15
Author(s): Rosita Russo, Valentina Vassallo, Antonietta Stellavato, Mariangela Valletta, Donatella Cimini, Paolo V. Pedone, Chiara Schiraldi, Angela Chambery
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0228856

Risk factors for obstructed labour in Eastern Uganda: A case control study
Cited by: 16
Author(s): Milton W. Musaba, Grace Ndeezi, Justus K. Barageine, Andrew Weeks, Victoria Nankabirwa, Felix Wamono, Daniel Semakula, James K Tumwine, Julius Wandabwa
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0222535

False-negative errors in next-generation sequencing contribute substantially to inconsistency of mutation databases
Cited by: 9
Author(s): Young Ho Kim, Yura Song, Jong Kwang Kim, Tae Min Kim, Hye Won Sim, Hyung Lae Kim, Hyonchol Jang, Young Woo Kim, Kyung Taek Hong
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0232979

Psychological risk indicators of disordered eating in athletes
Cited by: 7
Author(s): Hannah Stoyel, Vaithehy Shanmuganathan-Felton, Caroline Meyer, Lucy Serpell
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0250019

High-throughput screening of the ReFRAME, Pandemic Box, and COVID Box drug repurposing libraries against SARS-CoV-2 nsp15 endoribonuclease to identify small-molecule inhibitors of viral activity
Cited by: 26
Author(s): Ryan Choi, Mowei Zhou, Roger Shek, Jesse Wilson, Logan Tillery, Jonathan M. Craig, Indraneel Salukhe, Sarah E. Hickson, Neeraj Kumar, Rhema M. James, Garry W. Buchko, Ruilian Wu, Sydney Huff, Tu-Trinh Nguyen, Brett L. Hurst, Sara Cherry, Lynn K. Barrett, Jennifer Hyde, Wesley C. Van Voorhis
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0243839

Gamma distribution model of diffusion MRI for the differentiation of primary central nerve system lymphomas and glioblastomas
Cited by: 2
Author(s): Osamu Togao, Toru Chikui, Kenji Tokumori, Yukiko Kami, Kazufumi Kikuchi, Daichi Momosaka, Yoshitomo Kikuchi, Daisuke Kuga, Nobuhiro Hata, Masahiro Mizoguchi, Koji Iihara, Akio Hiwatashi
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0243718

Prevalence and correlates of prescription drug diversion and misuse among people living with HIV in the eThekwini district, KwaZulu-Natal, South Africa
Cited by: 4
Author(s): Buyisile Chibi, Nonhlanhla Yende‐Zuma, Tivani P. Mashamba-Thompson
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0237131

Impact of cardiovascular risk profile on COVID-19 outcome. A meta-analysis
Cited by: 62
Author(s): Jolanda Sabatino, Salvatore De Rosa, Giovanni Di Salvo, Ciro Indolfi
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0238750

Corneal dysfunction precedes the onset of hyperglycemia in a mouse model of diet-induced obesity
Cited by: 15
Author(s): Aubrey Hargrave, Justin Courson, Vanna Pham, Paul Landry, Sri Magadi, Pooja Shankar, Sam Hanlon, Apoorva Das, Rolando E. Rumbaut, C. Wayne Smith, Alan R. Burns
Software Mentions: 2
Published: almost 6 years ago

10.1186/1471-2164-13-578

Identification of essential genes of the periodontal pathogen Porphyromonas gingivalis
Cited by: 120
Author(s): Brian Klein, Elizabeth L Tenorio, David W. Lazinski, Andrew Camilli, Marilyn J. Duncan, Linden T. Hu
Software Mentions: 2
Published: almost 14 years ago

10.1371/journal.pone.0241928

Peripheral blood levels of brain-derived neurotrophic factor in patients with post-traumatic stress disorder (PTSD): A systematic review and meta-analysis
Cited by: 32
Author(s): Helia Mojtabavi, Amene Saghazadeh, Leigh van den Heuvel, Joana Bücker, Nima Rezaei
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0253558

Prevalence and associated factors of respiratory allergies in the Kingdom of Saudi Arabia: A cross-sectional investigation, September–December 2020
Cited by: 8
Author(s): Ahmad Almatroudi, Ayman Mousa, Divya Vinnakota, Adil Abalkhail, Ameen S. S. Alwashmi, Saleh A. Almatroodi, Fahad A. Alhumaydhi, Russell Kabir, Ilias Mahmud
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0145112

GTPase Activating Protein (Sh3 Domain) Binding Protein 1 Regulates the Processing of MicroRNA-1 during Cardiac Hypertrophy
Cited by: 24
Author(s): Minzhen He, Zhi Yang, Maha Abdellatif, Danish Sayed
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0207988

Metabarcoding targeting the EF1 alpha region to assess Fusarium diversity on cereals
Cited by: 23
Author(s): Anne-Laure Boutigny, Angélique Gautier, Ryan Basler, Florian Dauthieux, Stephen Leite, Romain Valade, Jaime Aguayo, Renaud Ioos, Valérie Laval
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0231694

The determinants of handwashing behaviour among internally displaced women in two camps in the Kurdistan Region of Iraq
Cited by: 12
Author(s): Aso Zangana, Nazar P. Shabila, Tom Heath, Sian White
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0200003

Inference of cell type content from human brain transcriptomic datasets illuminates the effects of age, manner of death, dissection, and psychiatric diagnosis
Cited by: 56
Author(s): Megan Hastings Hagenauer, Anton Schulmann, Jun Z. Li, Marquis P. Vawter, David Walsh, Robert C. Thompson, Cortney A. Turner, William E. Bunney, R Myers, Jack D. Barchas, Alan F. Schatzberg, Stanley J. Watson, Huda Akil
Software Mentions: 2
Published: about 8 years ago

10.1371/journal.pone.0209778

Field evaluation of near point of care Cepheid GeneXpert HIV-1 Qual for early infant diagnosis
Cited by: 19
Author(s): Valarie Opollo, Alliance Nikuze, Jihane Ben‐Farhat, Emily Anyango, Felix Humwa, Boaz Oyaro, Stephen Wanjala, Willis Omwoyo, Maxwel Majiwa, Victor Akelo, Clement Zeh, David Maman
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0235269

Efficacy of an ultrasound training program for nurse midwives to assess high-risk conditions at labor triage in rural Uganda
Cited by: 17
Author(s): Sachita Shah, Nicole Santos, Rose Kisa, Odida Mike Maxwell, Jude Mulowooza, Dilys Walker, Krithika M. Muruganandan
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0234262

The function of a heterozygous p53 mutation in a Li-Fraumeni syndrome patient
Cited by: 1
Author(s): Yang Li, Ting Li, Yuejia Tang, Zhiyan Zhan, Lixia Ding, Lili Song, Tingting Yu, Yi Yang, Jing Ma, Yingwen Zhang, Ying Zhou, Song Gu, Min Xu, Yijin Gao, Yanxin Li
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0236524

Patient perspectives on interpersonal aspects of healthcare and patient-centeredness at primary health facilities: A mixed methods study in rural Eastern Uganda
Cited by: 5
Author(s): Evelyn Waweru, Tom Smekens, Joanna Orne-Gliemann, Freddie Ssengooba, Jacqueline E W Broerse, Bart Criel
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0250633

Trends and predictors of in-hospital mortality among babies with hypoxic ischaemic encephalopathy at a tertiary hospital in Nigeria: A retrospective cohort study
Cited by: 5
Author(s): Beatrice Nkolika Ezenwa, Gbenga Olorunfemi, Iretiola Fajolu, Toyin Adeniyi, Khadijah Oleolo-Ayodeji, Blessing Kene-Udemezue, Joseph Ayodeji Olamijulo, Chinyere Ezeaka
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0034052

Mycobacteriophage Endolysins: Diverse and Modular Enzymes with Multiple Catalytic Activities
Cited by: 105
Author(s): Kimberly M. Payne, Graham F. Hatfull
Software Mentions: 2
Published: over 14 years ago

10.1371/journal.pone.0248331

Comorbid anxiety and depression: Prevalence and associated factors among pregnant women in Arba Minch zuria district, Gamo zone, southern Ethiopia
Cited by: 18
Author(s): Agegnehu Bante, Abera Mersha, Zerihun Zerdo, Biresaw Wassihun, Tomas Yeheyis
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0248742

The effectiveness of public health interventions against COVID-19: Lessons from the Singapore experience
Cited by: 21
Author(s): John P. Ansah, David B. Matchar, Shao Wei Lam, Jenny Guek Hong Low, Ahmad Reza Pourghaderi, Fahad Javaid Siddiqui, Tessa Lui Shi Min, Wei-Yan Aloysius Chia, Marcus Eng Hock Ong
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0027992

Accurate Genome Relative Abundance Estimation Based on Shotgun Metagenomic Reads
Cited by: 103
Author(s): Li Charlie Xia, Jacob A. Cram, Ting Chen, Jed A. Fuhrman, Fengzhu Sun
Software Mentions: 2
Published: over 14 years ago

10.1371/journal.pone.0137995

Enriched Bone Marrow Derived Disseminated Neuroblastoma Cells Can Be a Reliable Source for Gene Expression Studies—A Validation Study
Cited by: 5
Author(s): Fikret Rifatbegovic, Mojtaba Abbasi, Sabine Taschner‐Mandl, Maximilian Kauer, Andreas Weinhäusel, Rupert Handgretinger, Peter F. Ambros
Software Mentions: 2
Published: almost 11 years ago

10.1371/journal.pone.0242523

Maternal exposure to sulfonamides and adverse pregnancy outcomes: A systematic review and meta-analysis
Cited by: 5
Author(s): Peixuan Li, Xu‐Jie Qin, Fangbiao Tao, Kun Huang
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0225384

An examination of the association between early initiation of substance use and interrelated multilevel risk and protective factors among adolescents
Cited by: 19
Author(s): Carlos A. Trujillo, Diana Obando, Ángela Trujillo
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0243192

Development of a fasting blood glucose-based strategy to diagnose women with gestational diabetes mellitus at increased risk of adverse outcomes in a COVID-19 environment
Cited by: 10
Author(s): Michael C d’Emden, Donald S A McLeod, Jacobus Ungerer, Charles A Appleton, David Kanowski
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0231889

Gestational weight gain and its effect on birth outcomes in sub-Saharan Africa: Systematic review and meta-analysis
Cited by: 21
Author(s): Fekede Asefa, Allison Cummins, Yadeta Dessie, Andrew Hayen, Maralyn Foureur
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0237668

Socioeconomic effects of water hyacinth (Echhornia Crassipes) in Lake Tana, North Western Ethiopia
Cited by: 19
Author(s): Belachew Getnet Enyew, Workiyie Worie Assefa, Ayenew Gezie
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0085726

Oscillatory Behavior of Neutrophils under Opposing Chemoattractant Gradients Supports a Winner-Take-All Mechanism
Cited by: 26
Author(s): Matthew B. Byrne, Yuki Kimura, Ashish Kapoor, Yuan He, Kewin S. Mattam, Katherine M. Hasan, Luke N. Olson, Fei Wang, Paul J. A. Kenis, Christopher V. Rao
Software Mentions: 2
Published: over 12 years ago

10.1371/journal.pone.0168585

The Effect of Random Error on Diagnostic Accuracy Illustrated with the Anthropometric Diagnosis of Malnutrition
Cited by: 31
Author(s): Emmanuel Grellety, Michael Golden
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0244519

Nobody ever questions—Polypharmacy in care homes: A mixed methods evaluation of a multidisciplinary medicines optimisation initiative
Cited by: 4
Author(s): Sue Jordan, Hayley Prout, Neil Carter, John Dicomidis, Joanne Hayes, Jeff Round, Andrew Carson‐Stevens
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0172687

Single nucleotide polymorphism discovery in bovine liver using RNA-seq technology
Cited by: 10
Author(s): Chandra Shekhar Pareek, Paweł Błaszczyk, Piotr Dziuba, Urszula Czarnik, Leyland Fraser, Przemysław Sobiech, M. Pierzchała, Yaping Feng, Haja N. Kadarmideen, Dibyendu Kumar
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0245163

The use of complementary and alternative medicine among hypertensive and type 2 diabetic patients in Western Jamaica: A mixed methods study
Cited by: 17
Author(s): Omolade Adeniyi, LaTimberly Washington, Christina J. Glenn, Sarah Franklin, Anniecia Scott, Maung Aung, Soumya J. Niranjan, Pauline E. Jolly
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0184423

Cabozantinib versus everolimus, nivolumab, axitinib, sorafenib and best supportive care: A network meta-analysis of progression-free survival and overall survival in second line treatment of advanced renal cell carcinoma
Cited by: 41
Author(s): Billy Amzal, Shuai Fu, Jie Meng, J. Lister, Hélène Karcher
Software Mentions: 2
Published: almost 9 years ago

10.1371/journal.pone.0254421

Impaired memory B-cell recall responses in the elderly following recurrent influenza vaccination
Cited by: 3
Author(s): Rodrigo B. Abreu, Greg A. Kirchenbaum, Giuseppe A. Sautto, Emily F. Clutter, Ted M. Ross
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0252703

Assessing the appropriateness of the Moving Epidemic Method and WHO Average Curve Method for the syndromic surveillance of acute respiratory infection in Mauritius
Cited by: 1
Author(s): Mohabeer Teeluck, Atsushi Samura
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0240031

Active household contact screening for tuberculosis and provision of isoniazid preventive therapy to under-five children in Afghanistan
Cited by: 6
Author(s): Said Mirza Sayedi, Mohammad Khaled Seddiq, Mohammad Khakerah Rashidi, Ghulam Qader Qader, Naser Ikram, Muluken Melese, Pedro Suarez
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0246519

Prevalence of rheumatic heart disease in a major referral cardiology clinic in Ethiopia: A retrospective cross-sectional study
Cited by: 1
Author(s): Melkamu Hunegnaw Asmare, Frehiwot Woldehanna, Samuel Hunegnaw, Luc Janssens, Bart Vanrumste
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0200658

NMR-based metabolic profiling of urine, serum, fecal, and pancreatic tissue samples from the Ptf1a-Cre; LSL-KrasG12D transgenic mouse model of pancreatic cancer
Cited by: 9
Author(s): Michelle Jordan Schmahl, Daniel Regan, Adam C. Rivers, William C Joesten, Michael A. Kennedy
Software Mentions: 2
Published: about 8 years ago

10.1371/journal.pone.0170339

MEDICI: Mining Essentiality Data to Identify Critical Interactions for Cancer Drug Target Discovery and Development
Cited by: 4
Author(s): Sahar Harati, Lee Cooper, Josue D. Moran, Felipe Giuste, Yuhong Du, Andrey A. Ivanov, Margaret A. Johns, Fadlo R. Khuri, Haian Fu, Carlos S. Moreno
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0242204

Real-time drone derived thermal imagery outperforms traditional survey methods for an arboreal forest mammal
Cited by: 15
Author(s): Ryan R. Witt, Chad T. Beranek, Lachlan G. Howell, Shelby A. Ryan, John Clulow, Neil R. Jordan, Bob Denholm, Adam Roff
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0235421

Geochemical studies on rock varnish and petroglyphs in the Owens and Rose Valleys, California
Cited by: 12
Author(s): Meinrat O. Andreae, Abdullah Alamri, T. W. Andreae, Alan P. Garfinkel, Gerald H. Haug, Klaus Peter Jochum, Brigitte Stoll, Ulrike Weis
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0239470

A retrospective analysis of cases of Spontaneous Bacterial Peritonitis in cirrhosis patients
Cited by: 7
Author(s): Phillip P. Santoiemma, Omar Dakwar, Michael Angarone
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0249885

Prediction of early recurrence of pancreatic ductal adenocarcinoma after resection
Cited by: 8
Author(s): Toshitaka Sugawara, Daisuke Ban, Junichi Nishino, Shuichi Watanabe, Akio Maekawa, Yoshiya Ishikawa, Keiichi Akahoshi, Kosuke Ogawa, Hiroaki Ono, Akira Kudo, Shinji Tanaka, Minoru Tanabe
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0244055

Knowledge, practices and seroprevalence of Taenia species in smallholder farms in Gauteng, South Africa
Cited by: 7
Author(s): Nothando Altrecia Shongwe, Charles Byaruhanga, Pierre Dorny, Véronique Dermauw, Daniel Nenene Qekwana
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0149012

Metabolomic and Transcriptomic Comparison of Solid-State and Submerged Fermentation of Penicillium expansum KACC 40815
Cited by: 19
Author(s): Hyang Yeon Kim, Do Yeon Heo, Hye Min Park, Devendra Singh, Choong Hwan Lee
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0247979

Dietary diversity and its correlates among pregnant adolescent girls in Ghana
Cited by: 12
Author(s): Linda Afriyie Gyimah, Reginald Adjetey Annan, Charles Apprey, Anthony Kwaku Edusei, Linda Nana Esi Aduku, Wisdom Azanu, Herman Lutterodt
Software Mentions: 2
Published: over 5 years ago

10.1186/ar2541

Mapping similarities in mTOR pathway perturbations in mouse lupus nephritis models and human lupus nephritis
Cited by: 37
Author(s): Padmalatha S. Reddy, Holly Legault, Joseph P. Sypek, Mark J Collins, Elizabeth Goad, Samuel J. Goldman, Wei Liu, Stuart Murray, Andrew J. Dorner, Margot O’Toole
Software Mentions: 2
Published: over 18 years ago

10.1371/journal.pone.0239739

Grain Fe and Zn contents linked SSR markers based genetic diversity in rice
Cited by: 11
Author(s): Qasim Raza, Awais Riaz, Hira Saher, Amina Bibi, Mohsin Ali Raza, Syed Sultan Ali, Muhammad Farooq Sabar
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0248193

Assessment of the effect of therapy in a rat model of glioblastoma using [18F]FDG and [18F]FCho PET compared to contrast-enhanced MRI
Cited by: 4
Author(s): Julie Bolcaen, Benedicte Descamps, Karel Deblaere, Filip De Vos, Tom Boterberg, Giorgio Hallaert, Caroline Van den Broecke, Christian Vanhove, Ingeborg Goethals
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0230532

Evaluation of continuous quality improvement of tuberculosis and HIV diagnostic services in Amhara Public Health Institute, Ethiopia
Cited by: 3
Author(s): Melashu Balew Shiferaw, Abay Sisay Misganaw
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0237111

aTBP: A versatile tool for fish genotyping
Cited by: 2
Author(s): Silvia Gianı̀, Silvia Silletti, Floriana Gavazzi, Laura Morello, Giacomo Spinsanti, Katia Parati, Diego Breviario
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0168975

A Systematic Review of Ebola Treatment Trials to Assess the Extent to Which They Adhere to Ethical Guidelines
Cited by: 19
Author(s): Thomas S. Richardson, Andy Johnston, Heather Draper
Software Mentions: 2
Published: over 9 years ago

10.1186/s12863-020-00915-6

Optimal reference genes for gene expression analysis in polyploid of Cyprinus carpio and Carassius auratus
Cited by: 4
Author(s): Wenbin Liu, Xiudan Yuan, Shu-li Yuan, Liuye Dai, Shenghua Dong, Jinhui Liu, Liangyue Peng, Minmeng Wang, Yi Tang, Yamei Xiao
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0082444

The Development of a Novel High Throughput Computational Tool for Studying Individual and Collective Cellular Migration
Cited by: 11
Author(s): Douglas A. Chapnick, Jeremy Jacobsen, Xuedong Liu
Software Mentions: 2
Published: over 12 years ago

10.1371/journal.pone.0245076

Safety and efficacy study: Short-term application of radiofrequency ablation and stereotactic body radiotherapy for Barcelona Clinical Liver Cancer stage 0–B1 hepatocellular carcinoma
Cited by: 1
Author(s): Feiqian Wang, Kazushi Numata, Atsuya Takeda, Katsuaki Ogushi, Hiroyuki Fukuda, Koji Hara, Makoto Chuma, Takahisa Eriguchi, Yuichirou Tsurugai, Shin Maeda
Software Mentions: 2
Published: over 5 years ago

10.1186/1471-2164-13-62

Transcriptomic and proteomic analyses of the Aspergillus fumigatus hypoxia response using an oxygen-controlled fermenter
Cited by: 108
Author(s): Bridget M. Barker, Kristin Kroll, Martin Vödisch, Aurélien Mazurie, Olaf Kniemeyer, Robert A. Cramer
Software Mentions: 2
Published: over 14 years ago

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